Mutagenetix > Incidental Mutation

Incidental Mutation 'R0733:Rwdd3'

67091

Institutional Source

Beutler Lab

Gene Symbol

Rwdd3

Ensembl Gene

ENSMUSG00000028133

Gene Name

RWD domain containing 3

Synonyms

3110037C01Rik, 2510027J23Rik, RSUME

MMRRC Submission

038914-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R0733 (G1)

Quality Score

151

Status

Validated

Chromosome

Chromosomal Location

120949047-120965344 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 120965256 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Valine at position 24 (M24V)

Ref Sequence

ENSEMBL: ENSMUSP00000129262 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000039761] [ENSMUST00000106466] [ENSMUST00000106467] [ENSMUST00000164925] [ENSMUST00000170781]

AlphaFold

no structure available at present

Predicted Effect

probably benign
Transcript: ENSMUST00000039761
AA Change: M24V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000040826
Gene: ENSMUSG00000028133
AA Change: M24V

Domain	Start	End	E-Value	Type
RWD	7	114	3.63e-10	SMART
Pfam:DUF1115	144	262	1.7e-9	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000098650

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000106465

Predicted Effect

probably benign
Transcript: ENSMUST00000106466
AA Change: M24V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000102074
Gene: ENSMUSG00000028133
AA Change: M24V

Domain	Start	End	E-Value	Type
RWD	7	114	3.63e-10	SMART
Pfam:DUF1115	144	262	1.7e-9	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000106467
AA Change: M24V

SMART Domains

Protein: ENSMUSP00000102075
Gene: ENSMUSG00000028133
AA Change: M24V

Domain	Start	End	E-Value	Type
RWD	7	186	1.52e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000164925

SMART Domains

Protein: ENSMUSP00000133036
Gene: ENSMUSG00000028133

Domain	Start	End	E-Value	Type
PDB:2EBK\|A	1	23	2e-6	PDB
Blast:RWD	26	111	6e-42	BLAST

Predicted Effect

probably benign
Transcript: ENSMUST00000170781
AA Change: M24V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)

SMART Domains

Protein: ENSMUSP00000129262
Gene: ENSMUSG00000028133
AA Change: M24V

Domain	Start	End	E-Value	Type
RWD	7	114	3.63e-10	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000199790

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.4%
3x: 98.9%
10x: 97.7%
20x: 95.9%

Validation Efficiency

98% (60/61)

Allele List at MGI

Other mutations in this stock

Total: 59 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abl1	A	G	2: 31,668,957 (GRCm39)	Y88C	probably damaging	Het
Acbd3	A	G	1: 180,579,783 (GRCm39)	I476V	possibly damaging	Het
Apba2	T	C	7: 64,399,912 (GRCm39)	I689T	probably damaging	Het
AU018091	A	G	7: 3,209,001 (GRCm39)	Y362H	probably damaging	Het
Castor2	T	C	5: 134,165,054 (GRCm39)	F208L	possibly damaging	Het
Cdh26	T	C	2: 178,128,724 (GRCm39)	S759P	probably damaging	Het
Clcc1	A	G	3: 108,582,056 (GRCm39)	Q387R	probably benign	Het
Cobl	C	T	11: 12,315,167 (GRCm39)	G259R	probably benign	Het
Col4a1	C	T	8: 11,268,934 (GRCm39)	R968Q	possibly damaging	Het
Ddr2	A	G	1: 169,832,381 (GRCm39)		probably benign	Het
Dera	C	A	6: 137,773,846 (GRCm39)	N201K	probably damaging	Het
Dsg1a	A	C	18: 20,471,725 (GRCm39)	E659A	probably damaging	Het
Dus2	G	T	8: 106,772,702 (GRCm39)		probably null	Het
Ears2	T	A	7: 121,647,352 (GRCm39)	I311F	possibly damaging	Het
Eml4	T	A	17: 83,761,893 (GRCm39)	M417K	possibly damaging	Het
Exosc4	A	T	15: 76,213,616 (GRCm39)	M147L	probably benign	Het
Fam171a2	T	A	11: 102,330,548 (GRCm39)	Y278F	possibly damaging	Het
Fastk	A	C	5: 24,648,921 (GRCm39)	H155Q	probably null	Het
Fem1b	G	T	9: 62,704,125 (GRCm39)	N378K	possibly damaging	Het
Fut11	C	A	14: 20,745,427 (GRCm39)	Y119*	probably null	Het
Gm6797	T	C	X: 8,511,388 (GRCm39)		noncoding transcript	Het
Gstt4	T	C	10: 75,653,148 (GRCm39)	D138G	probably benign	Het
Hprt1	G	A	X: 52,091,027 (GRCm39)	C66Y	probably damaging	Het
Inpp5d	T	A	1: 87,595,799 (GRCm39)		probably benign	Het
Ints6l	T	A	X: 55,547,108 (GRCm39)	S621T	probably benign	Het
Ints6l	C	G	X: 55,550,172 (GRCm39)	A699G	probably benign	Het
Kctd3	A	G	1: 188,729,247 (GRCm39)		probably benign	Het
Kntc1	G	T	5: 123,928,979 (GRCm39)	V1252L	probably null	Het
Lama5	A	T	2: 179,822,511 (GRCm39)	M2854K	possibly damaging	Het
Lcn5	G	T	2: 25,551,113 (GRCm39)	L187F	probably damaging	Het
Lrp3	A	T	7: 34,901,545 (GRCm39)	L758M	possibly damaging	Het
Ltn1	T	A	16: 87,209,395 (GRCm39)	I740F	probably benign	Het
Mcm5	A	G	8: 75,853,876 (GRCm39)	K710R	probably benign	Het
Mllt10	A	G	2: 18,208,577 (GRCm39)		probably benign	Het
Nbr1	T	A	11: 101,467,197 (GRCm39)	M864K	probably benign	Het
Nkiras2	T	C	11: 100,515,758 (GRCm39)		probably null	Het
Nlrp4d	T	A	7: 10,116,449 (GRCm39)	E144V	probably benign	Het
Nppc	T	C	1: 86,597,356 (GRCm39)		probably benign	Het
Ormdl2	T	A	10: 128,655,868 (GRCm39)	Q94L	probably damaging	Het
Paox	G	C	7: 139,707,440 (GRCm39)	D88H	probably damaging	Het
Prl7a2	T	C	13: 27,846,671 (GRCm39)	E114G	probably damaging	Het
Prpsap2	A	G	11: 61,631,826 (GRCm39)	I177T	possibly damaging	Het
Prss54	T	C	8: 96,286,368 (GRCm39)	D235G	possibly damaging	Het
Serpinb6e	T	A	13: 34,025,201 (GRCm39)	N30I	probably benign	Het
Sh3rf1	G	A	8: 61,825,594 (GRCm39)	A530T	probably benign	Het
Slc28a1	T	C	7: 80,774,648 (GRCm39)	I165T	probably benign	Het
Slco6d1	T	A	1: 98,355,994 (GRCm39)	L143*	probably null	Het
Snrnp40	C	G	4: 130,271,836 (GRCm39)		probably null	Het
Snx27	A	G	3: 94,469,320 (GRCm39)	L7P	probably benign	Het
Spata31e2	T	A	1: 26,722,013 (GRCm39)	T1056S	possibly damaging	Het
Spsb1	C	T	4: 149,991,374 (GRCm39)	V65I	probably benign	Het
St8sia2	C	T	7: 73,610,588 (GRCm39)	G232S	probably benign	Het
Sun1	A	G	5: 139,216,918 (GRCm39)	H255R	possibly damaging	Het
Tent2	T	A	13: 93,291,547 (GRCm39)	Q365L	probably benign	Het
Ube2k	A	G	5: 65,738,795 (GRCm39)	I95V	probably damaging	Het
Ube2m	C	A	7: 12,769,679 (GRCm39)	E126D	probably damaging	Het
Vmn2r27	A	T	6: 124,169,147 (GRCm39)	M661K	probably benign	Het
Wdr47	A	T	3: 108,525,939 (GRCm39)	D154V	probably damaging	Het
Zfp113	A	G	5: 138,143,845 (GRCm39)	V135A	probably benign	Het

Other mutations in Rwdd3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01317:Rwdd3	APN	3	120,965,282 (GRCm39)	missense	possibly damaging	0.79
IGL02367:Rwdd3	APN	3	120,952,679 (GRCm39)	missense	probably damaging	0.99
R0466:Rwdd3	UTSW	3	120,952,668 (GRCm39)	missense	possibly damaging	0.82
R4270:Rwdd3	UTSW	3	120,952,550 (GRCm39)	missense	probably damaging	1.00
R4384:Rwdd3	UTSW	3	120,952,406 (GRCm39)	intron	probably benign
R4650:Rwdd3	UTSW	3	120,952,826 (GRCm39)	missense	probably damaging	1.00
R4960:Rwdd3	UTSW	3	120,952,470 (GRCm39)	missense	probably damaging	1.00
R5061:Rwdd3	UTSW	3	120,953,432 (GRCm39)	intron	probably benign
R6000:Rwdd3	UTSW	3	120,950,162 (GRCm39)	missense	probably damaging	1.00
R6480:Rwdd3	UTSW	3	120,950,101 (GRCm39)	missense	probably damaging	1.00
R7117:Rwdd3	UTSW	3	120,964,987 (GRCm39)	missense	probably benign	0.21
R7471:Rwdd3	UTSW	3	120,964,961 (GRCm39)	missense	probably benign	0.10
R7615:Rwdd3	UTSW	3	120,965,253 (GRCm39)	start gained	probably benign
R8531:Rwdd3	UTSW	3	120,952,788 (GRCm39)	missense	probably benign	0.34
R9055:Rwdd3	UTSW	3	120,952,871 (GRCm39)	missense	probably benign	0.01

Predicted Primers

PCR Primer
(F):5'- ACAAATGCTTATGGTGGATGCCGAC -3'
(R):5'- ACAGAGGCCAAAACTCAGAAGGTTC -3'

Sequencing Primer
(F):5'- ATGCCGACTATTTGGAGGAGC -3'
(R):5'- TAAACACGCCCATCTcccc -3'

Posted On

2013-09-03