Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03152:Tubb4b-ps1'

411129

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Tubb4b-ps1

Ensembl Gene

ENSMUSG00000095159

Gene Name

tubulin, beta 4B class IVB, pseudogene 1

Synonyms

Tubb2c-ps1, Tubb2c2, ENSMUSG00000056506

Accession Numbers

Essential gene?

Not available question?

Stock #

IGL03152

Quality Score

Status

Chromosome

Chromosomal Location

7229365-7230700 bp(+) (GRCm39)

Type of Mutation

intron

DNA Base Change (assembly)

A to G at 7230001 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000143568 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000200317]

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000082917

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000179460

SMART Domains

Protein: ENSMUSP00000136922
Gene: ENSMUSG00000095159

Domain	Start	End	E-Value	Type
Tubulin	47	243	6.6e-61	SMART
Tubulin_C	245	382	4.17e-49	SMART
low complexity region	427	444	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000200317

SMART Domains

Protein: ENSMUSP00000143568
Gene: ENSMUSG00000092094

Domain	Start	End	E-Value	Type
ZnF_C2H2	56	80	2e-2	SMART
low complexity region	958	970	N/A	INTRINSIC
low complexity region	1155	1179	N/A	INTRINSIC
low complexity region	1196	1207	N/A	INTRINSIC
low complexity region	1215	1234	N/A	INTRINSIC

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 23 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Cacna2d1	T	A	5: 16,527,566 (GRCm39)	N540K	probably benign	Het
Caln1	A	G	5: 130,646,693 (GRCm39)	E43G	probably damaging	Het
Car14	A	C	3: 95,806,157 (GRCm39)	C301W	probably damaging	Het
Clpx	G	A	9: 65,217,458 (GRCm39)	V9I	possibly damaging	Het
Edar	A	G	10: 58,445,817 (GRCm39)	F249S	possibly damaging	Het
Fads2b	A	G	2: 85,330,648 (GRCm39)	S220P	probably damaging	Het
Fhip2a	C	A	19: 57,367,264 (GRCm39)	T269K	probably damaging	Het
Gm4799	A	G	10: 82,790,797 (GRCm39)		noncoding transcript	Het
Grk4	T	C	5: 34,902,701 (GRCm39)	S418P	probably damaging	Het
Kcnh4	A	G	11: 100,636,598 (GRCm39)	S774P	probably benign	Het
Kif23	A	G	9: 61,837,058 (GRCm39)		probably benign	Het
Lyl1	C	T	8: 85,429,300 (GRCm39)	P3L	possibly damaging	Het
Myef2l	A	T	3: 10,153,334 (GRCm39)	K34N	probably benign	Het
Or5al1	A	T	2: 85,990,030 (GRCm39)	I228N	possibly damaging	Het
Pcgf6	A	T	19: 47,037,344 (GRCm39)		probably benign	Het
Ryr2	G	A	13: 11,868,036 (GRCm39)	R265C	probably damaging	Het
Smgc	A	G	15: 91,725,625 (GRCm39)	K2R	possibly damaging	Het
Stx5a	T	C	19: 8,727,138 (GRCm39)		probably null	Het
Syne2	A	T	12: 76,012,486 (GRCm39)	N2560I	probably benign	Het
Tuba3a	A	T	6: 125,258,300 (GRCm39)	L230Q	probably damaging	Het
Zfp217	A	G	2: 169,960,972 (GRCm39)	S452P	probably damaging	Het
Zfp764l1	A	G	7: 126,991,469 (GRCm39)	C173R	probably damaging	Het
Zzef1	G	A	11: 72,814,008 (GRCm39)		probably null	Het

Other mutations in Tubb4b-ps1

Allele	Source	Chr	Coord	Type	Predicted Effect
IGL00973:Tubb4b-ps1	APN	5	7,229,408 (GRCm39)	intron	probably benign
IGL01861:Tubb4b-ps1	APN	5	7,229,374 (GRCm39)	intron	probably benign
IGL01980:Tubb4b-ps1	APN	5	7,229,843 (GRCm39)	intron	probably benign
IGL02336:Tubb4b-ps1	APN	5	7,229,952 (GRCm39)	intron	probably benign
IGL03166:Tubb4b-ps1	APN	5	7,229,965 (GRCm39)	intron	probably benign
IGL03279:Tubb4b-ps1	APN	5	7,229,630 (GRCm39)	intron	probably benign

Posted On

2016-08-02