Incidental Mutation 'R8674:Cyp4a29'
ID |
661293 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Cyp4a29
|
Ensembl Gene |
ENSMUSG00000083138 |
Gene Name |
cytochrome P450, family 4, subfamily a, polypeptide 29 |
Synonyms |
Cyp4a29-ps |
MMRRC Submission |
068529-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.067)
|
Stock # |
R8674 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
115099281-115111754 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 115106882 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Isoleucine to Phenylalanine
at position 180
(I180F)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000139717
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000118278]
|
AlphaFold |
A0A087WPC3 |
Predicted Effect |
probably benign
Transcript: ENSMUST00000118278
AA Change: I180F
PolyPhen 2
Score 0.075 (Sensitivity: 0.93; Specificity: 0.85)
|
SMART Domains |
Protein: ENSMUSP00000139717 Gene: ENSMUSG00000083138 AA Change: I180F
Domain | Start | End | E-Value | Type |
transmembrane domain
|
9 |
31 |
N/A |
INTRINSIC |
Pfam:p450
|
51 |
504 |
1.1e-127 |
PFAM |
|
Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.5%
|
Validation Efficiency |
100% (38/38) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 39 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930447C04Rik |
T |
C |
12: 72,956,696 (GRCm39) |
I165V |
probably benign |
Het |
Adgrg1 |
A |
T |
8: 95,727,526 (GRCm39) |
|
probably benign |
Het |
Ahnak |
T |
C |
19: 8,983,360 (GRCm39) |
I1548T |
probably damaging |
Het |
Alox12b |
A |
G |
11: 69,054,801 (GRCm39) |
Y268C |
possibly damaging |
Het |
Chd8 |
T |
C |
14: 52,450,463 (GRCm39) |
D1465G |
probably damaging |
Het |
Csgalnact1 |
A |
G |
8: 68,826,268 (GRCm39) |
V350A |
possibly damaging |
Het |
Dcaf1 |
T |
A |
9: 106,740,896 (GRCm39) |
D1294E |
probably damaging |
Het |
Defb47 |
T |
C |
14: 63,235,579 (GRCm39) |
L10P |
possibly damaging |
Het |
Gpr179 |
T |
C |
11: 97,225,873 (GRCm39) |
E2094G |
probably benign |
Het |
Gtse1 |
C |
A |
15: 85,746,376 (GRCm39) |
P64Q |
probably damaging |
Het |
Gys2 |
A |
G |
6: 142,376,048 (GRCm39) |
V538A |
probably benign |
Het |
Hmgxb3 |
G |
A |
18: 61,269,303 (GRCm39) |
S993L |
probably benign |
Het |
Lgals8 |
A |
T |
13: 12,462,117 (GRCm39) |
F238I |
probably damaging |
Het |
Ltn1 |
A |
C |
16: 87,195,673 (GRCm39) |
D1284E |
probably benign |
Het |
Myh10 |
A |
G |
11: 68,705,257 (GRCm39) |
E1925G |
probably damaging |
Het |
Nck1 |
T |
C |
9: 100,390,580 (GRCm39) |
N43S |
probably damaging |
Het |
Nsun5 |
C |
A |
5: 135,400,394 (GRCm39) |
T145N |
probably damaging |
Het |
Or10d1 |
T |
C |
9: 39,484,249 (GRCm39) |
Y102C |
probably damaging |
Het |
Or10d3 |
A |
G |
9: 39,461,675 (GRCm39) |
F164S |
probably damaging |
Het |
Or10x4 |
A |
G |
1: 174,219,258 (GRCm39) |
T208A |
probably damaging |
Het |
Or4c103 |
T |
A |
2: 88,513,774 (GRCm39) |
T101S |
probably benign |
Het |
Pmpca |
G |
C |
2: 26,285,046 (GRCm39) |
E424Q |
possibly damaging |
Het |
Ppp4r4 |
A |
G |
12: 103,562,720 (GRCm39) |
E563G |
probably damaging |
Het |
Pramel42 |
T |
C |
5: 94,685,605 (GRCm39) |
C422R |
probably damaging |
Het |
Rab11fip5 |
T |
A |
6: 85,318,910 (GRCm39) |
M660L |
probably benign |
Het |
Rbm47 |
T |
A |
5: 66,176,742 (GRCm39) |
N527I |
possibly damaging |
Het |
Rpl12 |
T |
A |
2: 32,852,122 (GRCm39) |
|
probably benign |
Het |
Slc22a14 |
C |
A |
9: 119,007,467 (GRCm39) |
W314L |
probably null |
Het |
Spen |
C |
T |
4: 141,197,681 (GRCm39) |
A3396T |
probably benign |
Het |
Sphkap |
A |
G |
1: 83,255,565 (GRCm39) |
V728A |
probably benign |
Het |
Spint4 |
T |
A |
2: 164,542,902 (GRCm39) |
|
probably null |
Het |
Sptbn1 |
A |
G |
11: 30,089,352 (GRCm39) |
S637P |
possibly damaging |
Het |
Trpm7 |
T |
C |
2: 126,641,086 (GRCm39) |
|
probably benign |
Het |
Trrap |
C |
T |
5: 144,727,842 (GRCm39) |
T521I |
probably benign |
Het |
Vmn2r44 |
T |
C |
7: 8,380,822 (GRCm39) |
Y357C |
probably damaging |
Het |
Vwa2 |
A |
G |
19: 56,875,427 (GRCm39) |
D82G |
possibly damaging |
Het |
Zdhhc17 |
A |
G |
10: 110,785,540 (GRCm39) |
I424T |
probably benign |
Het |
Zmiz1 |
A |
G |
14: 25,647,410 (GRCm39) |
I409M |
probably benign |
Het |
Zscan18 |
T |
C |
7: 12,504,827 (GRCm39) |
|
probably benign |
Het |
|
Other mutations in Cyp4a29 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02687:Cyp4a29
|
APN |
4 |
115,108,397 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03224:Cyp4a29
|
APN |
4 |
115,104,247 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL03271:Cyp4a29
|
APN |
4 |
115,111,705 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03387:Cyp4a29
|
APN |
4 |
115,108,368 (GRCm39) |
missense |
possibly damaging |
0.70 |
R0304:Cyp4a29
|
UTSW |
4 |
115,110,129 (GRCm39) |
splice site |
probably benign |
|
R2656:Cyp4a29
|
UTSW |
4 |
115,106,921 (GRCm39) |
missense |
possibly damaging |
0.95 |
R4012:Cyp4a29
|
UTSW |
4 |
115,105,707 (GRCm39) |
missense |
probably benign |
|
R4834:Cyp4a29
|
UTSW |
4 |
115,106,867 (GRCm39) |
missense |
probably benign |
0.00 |
R4856:Cyp4a29
|
UTSW |
4 |
115,110,078 (GRCm39) |
missense |
probably benign |
|
R4886:Cyp4a29
|
UTSW |
4 |
115,110,078 (GRCm39) |
missense |
probably benign |
|
R4939:Cyp4a29
|
UTSW |
4 |
115,104,873 (GRCm39) |
critical splice donor site |
probably null |
|
R4967:Cyp4a29
|
UTSW |
4 |
115,104,196 (GRCm39) |
missense |
probably benign |
0.00 |
R5071:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5072:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5073:Cyp4a29
|
UTSW |
4 |
115,104,860 (GRCm39) |
missense |
probably benign |
0.00 |
R5620:Cyp4a29
|
UTSW |
4 |
115,108,088 (GRCm39) |
missense |
probably benign |
0.12 |
R5818:Cyp4a29
|
UTSW |
4 |
115,104,229 (GRCm39) |
missense |
possibly damaging |
0.89 |
R6219:Cyp4a29
|
UTSW |
4 |
115,106,927 (GRCm39) |
missense |
probably damaging |
0.99 |
R6318:Cyp4a29
|
UTSW |
4 |
115,107,396 (GRCm39) |
missense |
probably benign |
0.00 |
R6386:Cyp4a29
|
UTSW |
4 |
115,104,272 (GRCm39) |
critical splice donor site |
probably null |
|
R6456:Cyp4a29
|
UTSW |
4 |
115,108,381 (GRCm39) |
missense |
probably benign |
0.30 |
R7393:Cyp4a29
|
UTSW |
4 |
115,099,393 (GRCm39) |
missense |
probably damaging |
1.00 |
R7443:Cyp4a29
|
UTSW |
4 |
115,105,756 (GRCm39) |
missense |
probably damaging |
1.00 |
R7719:Cyp4a29
|
UTSW |
4 |
115,108,137 (GRCm39) |
missense |
possibly damaging |
0.65 |
R7831:Cyp4a29
|
UTSW |
4 |
115,107,367 (GRCm39) |
missense |
probably benign |
0.00 |
R7983:Cyp4a29
|
UTSW |
4 |
115,108,099 (GRCm39) |
missense |
probably damaging |
1.00 |
R8304:Cyp4a29
|
UTSW |
4 |
115,111,653 (GRCm39) |
missense |
probably damaging |
1.00 |
R9109:Cyp4a29
|
UTSW |
4 |
115,108,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R9298:Cyp4a29
|
UTSW |
4 |
115,108,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R9486:Cyp4a29
|
UTSW |
4 |
115,106,916 (GRCm39) |
missense |
probably damaging |
1.00 |
R9601:Cyp4a29
|
UTSW |
4 |
115,105,772 (GRCm39) |
missense |
probably damaging |
0.98 |
R9667:Cyp4a29
|
UTSW |
4 |
115,111,630 (GRCm39) |
missense |
probably damaging |
1.00 |
R9790:Cyp4a29
|
UTSW |
4 |
115,108,380 (GRCm39) |
missense |
probably damaging |
1.00 |
R9791:Cyp4a29
|
UTSW |
4 |
115,108,380 (GRCm39) |
missense |
probably damaging |
1.00 |
U24488:Cyp4a29
|
UTSW |
4 |
115,108,204 (GRCm39) |
missense |
possibly damaging |
0.95 |
Z1088:Cyp4a29
|
UTSW |
4 |
115,105,693 (GRCm39) |
missense |
probably benign |
0.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GAAACATGCATGGCAGTCC -3'
(R):5'- AAAATTTGCCTGATGCTGGG -3'
Sequencing Primer
(F):5'- GGCAGTCCAAATATATCTTCACATTC -3'
(R):5'- CTTGCTTTTTGTGGAGATAAACATCC -3'
|
Posted On |
2021-03-08 |