Incidental Mutation 'R5937:Or14c40'
| ID |
462324 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or14c40
|
| Ensembl Gene |
ENSMUSG00000063394 |
| Gene Name |
olfactory receptor family 14 subfamily C member 40 |
| Synonyms |
Olfr293, MOR221-3, GA_x6K02T2NHDJ-9457744-9456734 |
| MMRRC Submission |
043242-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.115)
|
| Stock # |
R5937 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
86312872-86313882 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 86313684 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Leucine to Phenylalanine
at position 271
(L271F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149959
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000081474]
[ENSMUST00000214401]
[ENSMUST00000215280]
|
| AlphaFold |
Q7TS10 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000081474
AA Change: L271F
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| SMART Domains |
Protein: ENSMUSP00000080193
Gene: ENSMUSG00000063394
AA Change: L271F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
35 |
313 |
2.1e-45 |
PFAM |
|
Pfam:7tm_1
|
45 |
295 |
1.6e-19 |
PFAM |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214401
AA Change: L271F
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215280
AA Change: L271F
PolyPhen 2
Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.4%
- 10x: 97.3%
- 20x: 91.5%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| A1bg |
A |
T |
15: 60,791,495 (GRCm39) |
W314R |
probably benign |
Het |
| Adgrv1 |
A |
T |
13: 81,255,194 (GRCm39) |
V6143E |
probably damaging |
Het |
| Agap3 |
C |
T |
5: 24,682,815 (GRCm39) |
T261I |
probably damaging |
Het |
| Ano6 |
T |
C |
15: 95,811,838 (GRCm39) |
I241T |
probably damaging |
Het |
| Arhgef28 |
T |
C |
13: 98,076,051 (GRCm39) |
T1328A |
probably benign |
Het |
| Capn10 |
C |
T |
1: 92,867,105 (GRCm39) |
R112W |
probably damaging |
Het |
| Car5a |
A |
T |
8: 122,666,560 (GRCm39) |
W46R |
probably damaging |
Het |
| Cntn6 |
C |
A |
6: 104,810,064 (GRCm39) |
T582K |
possibly damaging |
Het |
| Ctsh |
T |
C |
9: 89,943,509 (GRCm39) |
V60A |
probably benign |
Het |
| Ctsll3 |
A |
G |
13: 60,947,410 (GRCm39) |
F259L |
probably damaging |
Het |
| Dennd2b |
A |
T |
7: 109,156,478 (GRCm39) |
C91S |
possibly damaging |
Het |
| Fam228a |
T |
C |
12: 4,787,725 (GRCm39) |
E16G |
probably damaging |
Het |
| G3bp2 |
A |
G |
5: 92,203,256 (GRCm39) |
I388T |
probably damaging |
Het |
| Galnt5 |
A |
T |
2: 57,928,949 (GRCm39) |
K926N |
probably benign |
Het |
| Gm10097 |
G |
A |
10: 5,019,485 (GRCm39) |
|
probably benign |
Het |
| Gm9978 |
T |
A |
10: 78,322,675 (GRCm39) |
|
noncoding transcript |
Het |
| Gria1 |
A |
G |
11: 57,080,559 (GRCm39) |
T112A |
probably benign |
Het |
| Hnrnpk |
A |
C |
13: 58,543,016 (GRCm39) |
V134G |
probably damaging |
Het |
| Insr |
A |
G |
8: 3,224,808 (GRCm39) |
V220A |
probably benign |
Het |
| Lhx4 |
A |
G |
1: 155,586,023 (GRCm39) |
I96T |
probably damaging |
Het |
| Lrp1 |
T |
C |
10: 127,419,745 (GRCm39) |
T955A |
possibly damaging |
Het |
| Lrtm1 |
T |
C |
14: 28,743,787 (GRCm39) |
V85A |
possibly damaging |
Het |
| Man2a2 |
T |
C |
7: 80,013,251 (GRCm39) |
Y514C |
probably damaging |
Het |
| Npas1 |
T |
A |
7: 16,197,187 (GRCm39) |
D226V |
probably benign |
Het |
| Nrcam |
G |
A |
12: 44,619,074 (GRCm39) |
V858I |
probably benign |
Het |
| Or5b108 |
T |
A |
19: 13,168,675 (GRCm39) |
S215T |
probably damaging |
Het |
| Pde6b |
G |
T |
5: 108,572,193 (GRCm39) |
A478S |
probably benign |
Het |
| Pex1 |
T |
A |
5: 3,674,487 (GRCm39) |
N789K |
possibly damaging |
Het |
| Plekha6 |
A |
G |
1: 133,187,839 (GRCm39) |
D120G |
possibly damaging |
Het |
| Pomgnt1 |
A |
G |
4: 116,011,110 (GRCm39) |
T220A |
probably benign |
Het |
| Sdr39u1 |
A |
T |
14: 56,135,364 (GRCm39) |
I193K |
probably damaging |
Het |
| Sec61a2 |
C |
A |
2: 5,891,368 (GRCm39) |
M54I |
probably benign |
Het |
| Sema5a |
A |
G |
15: 32,574,987 (GRCm39) |
Y365C |
probably damaging |
Het |
| Sra1 |
C |
T |
18: 36,804,652 (GRCm39) |
|
probably null |
Het |
| Taf5 |
C |
T |
19: 47,070,334 (GRCm39) |
S640L |
probably damaging |
Het |
| Tas2r140 |
T |
A |
6: 133,032,236 (GRCm39) |
H174L |
probably benign |
Het |
| Tmem63a |
T |
A |
1: 180,788,716 (GRCm39) |
V351D |
probably damaging |
Het |
| Ttll7 |
C |
T |
3: 146,649,847 (GRCm39) |
Q626* |
probably null |
Het |
| Ubn2 |
T |
A |
6: 38,440,917 (GRCm39) |
V263E |
possibly damaging |
Het |
| Vmn2r106 |
C |
T |
17: 20,505,667 (GRCm39) |
W9* |
probably null |
Het |
| Xrcc3 |
C |
G |
12: 111,774,406 (GRCm39) |
C141S |
probably null |
Het |
| Zfp516 |
T |
A |
18: 82,974,958 (GRCm39) |
D385E |
probably damaging |
Het |
|
| Other mutations in Or14c40 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02478:Or14c40
|
APN |
7 |
86,313,344 (GRCm39) |
missense |
probably damaging |
0.97 |
|
IGL02659:Or14c40
|
APN |
7 |
86,313,289 (GRCm39) |
missense |
probably benign |
0.06 |
|
IGL02730:Or14c40
|
APN |
7 |
86,313,275 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL02959:Or14c40
|
APN |
7 |
86,313,737 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R0045:Or14c40
|
UTSW |
7 |
86,313,548 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R0094:Or14c40
|
UTSW |
7 |
86,313,502 (GRCm39) |
missense |
probably benign |
|
|
R0094:Or14c40
|
UTSW |
7 |
86,313,502 (GRCm39) |
missense |
probably benign |
|
|
R0152:Or14c40
|
UTSW |
7 |
86,313,719 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0669:Or14c40
|
UTSW |
7 |
86,313,544 (GRCm39) |
missense |
possibly damaging |
0.79 |
|
R0942:Or14c40
|
UTSW |
7 |
86,313,314 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1467:Or14c40
|
UTSW |
7 |
86,313,185 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1467:Or14c40
|
UTSW |
7 |
86,313,185 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R1656:Or14c40
|
UTSW |
7 |
86,313,331 (GRCm39) |
missense |
probably benign |
0.04 |
|
R2010:Or14c40
|
UTSW |
7 |
86,313,811 (GRCm39) |
missense |
probably benign |
|
|
R2056:Or14c40
|
UTSW |
7 |
86,313,591 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2059:Or14c40
|
UTSW |
7 |
86,313,591 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2105:Or14c40
|
UTSW |
7 |
86,313,591 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4166:Or14c40
|
UTSW |
7 |
86,313,602 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4303:Or14c40
|
UTSW |
7 |
86,313,163 (GRCm39) |
missense |
probably benign |
0.16 |
|
R4531:Or14c40
|
UTSW |
7 |
86,313,479 (GRCm39) |
missense |
probably benign |
0.02 |
|
R4808:Or14c40
|
UTSW |
7 |
86,313,146 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5748:Or14c40
|
UTSW |
7 |
86,313,293 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R6178:Or14c40
|
UTSW |
7 |
86,313,819 (GRCm39) |
missense |
probably benign |
0.45 |
|
R6766:Or14c40
|
UTSW |
7 |
86,313,293 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7315:Or14c40
|
UTSW |
7 |
86,313,445 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7585:Or14c40
|
UTSW |
7 |
86,313,880 (GRCm39) |
makesense |
probably null |
|
|
R9201:Or14c40
|
UTSW |
7 |
86,313,749 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- GACTGCCATTGGTCTCAGTG -3'
(R):5'- TGAGCTTCAGTGTTTGAGCAAG -3'
Sequencing Primer
(F):5'- CCATTGGTCTCAGTGGTAGC -3'
(R):5'- CTTCCTCTTGAAAACTCTGACAAG -3'
|
| Posted On |
2017-02-28 |
Incidental Mutation