Incidental Mutation 'R0510:Pcdh15'
ID 47826
Institutional Source Beutler Lab
Gene Symbol Pcdh15
Ensembl Gene ENSMUSG00000052613
Gene Name protocadherin 15
Synonyms Gm9815, nmf19, roda, Ush1f
MMRRC Submission 038704-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R0510 (G1)
Quality Score 188
Status Validated
Chromosome 10
Chromosomal Location 72935174-74485569 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 74126808 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Tyrosine at position 296 (N296Y)
Ref Sequence ENSEMBL: ENSMUSP00000142238 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000064562] [ENSMUST00000092420] [ENSMUST00000105424] [ENSMUST00000105426] [ENSMUST00000105429] [ENSMUST00000125006] [ENSMUST00000129404] [ENSMUST00000131724] [ENSMUST00000134009] [ENSMUST00000125517] [ENSMUST00000125055] [ENSMUST00000126920] [ENSMUST00000136096] [ENSMUST00000131321] [ENSMUST00000144302] [ENSMUST00000124046] [ENSMUST00000146682] [ENSMUST00000195531] [ENSMUST00000177420] [ENSMUST00000193739] [ENSMUST00000151116] [ENSMUST00000193174] [ENSMUST00000177107] [ENSMUST00000191709] [ENSMUST00000193361] [ENSMUST00000152819] [ENSMUST00000149977] [ENSMUST00000152655] [ENSMUST00000147189] [ENSMUST00000155701] [ENSMUST00000191854]
AlphaFold Q99PJ1
Predicted Effect probably damaging
Transcript: ENSMUST00000064562
AA Change: N296Y

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000068561
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 644 2.34e-16 SMART
CA 668 746 1.93e-26 SMART
CA 770 853 5.69e-15 SMART
CA 877 963 6.85e-9 SMART
CA 984 1071 3.09e-16 SMART
CA 1095 1179 4.49e-4 SMART
transmembrane domain 1304 1326 N/A INTRINSIC
low complexity region 1347 1374 N/A INTRINSIC
low complexity region 1583 1600 N/A INTRINSIC
low complexity region 1662 1682 N/A INTRINSIC
low complexity region 1689 1702 N/A INTRINSIC
low complexity region 1706 1756 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000092420
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000090076
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1377 1399 N/A INTRINSIC
low complexity region 1415 1442 N/A INTRINSIC
low complexity region 1651 1668 N/A INTRINSIC
low complexity region 1730 1750 N/A INTRINSIC
low complexity region 1757 1770 N/A INTRINSIC
low complexity region 1774 1824 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000105424
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000101064
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1656 1673 N/A INTRINSIC
low complexity region 1735 1755 N/A INTRINSIC
low complexity region 1762 1775 N/A INTRINSIC
low complexity region 1779 1829 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000105426
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000101066
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1661 1678 N/A INTRINSIC
low complexity region 1740 1760 N/A INTRINSIC
low complexity region 1767 1780 N/A INTRINSIC
low complexity region 1784 1834 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000105429
AA Change: N296Y

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000101069
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 644 2.34e-16 SMART
CA 668 746 1.93e-26 SMART
CA 770 853 5.69e-15 SMART
CA 877 963 6.85e-9 SMART
CA 984 1071 3.09e-16 SMART
CA 1095 1179 4.49e-4 SMART
transmembrane domain 1304 1326 N/A INTRINSIC
low complexity region 1347 1374 N/A INTRINSIC
low complexity region 1585 1602 N/A INTRINSIC
low complexity region 1664 1684 N/A INTRINSIC
low complexity region 1691 1704 N/A INTRINSIC
low complexity region 1708 1758 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000123398
Predicted Effect probably damaging
Transcript: ENSMUST00000125006
AA Change: N296Y

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000120056
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1122 4.52e-2 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000129404
AA Change: N274Y

PolyPhen 2 Score 0.171 (Sensitivity: 0.92; Specificity: 0.87)
SMART Domains Protein: ENSMUSP00000117731
Gene: ENSMUSG00000052613
AA Change: N274Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 42 123 1.22e-1 SMART
CA 152 241 5.48e-8 SMART
CA 282 371 1.94e-8 SMART
CA 404 485 2.29e-10 SMART
CA 509 591 4.88e-14 SMART
CA 616 693 4.65e-20 SMART
CA 717 795 1.93e-26 SMART
CA 819 902 5.69e-15 SMART
CA 926 1012 6.85e-9 SMART
CA 1033 1120 3.09e-16 SMART
CA 1144 1228 4.49e-4 SMART
transmembrane domain 1355 1377 N/A INTRINSIC
low complexity region 1393 1420 N/A INTRINSIC
low complexity region 1631 1648 N/A INTRINSIC
low complexity region 1710 1730 N/A INTRINSIC
low complexity region 1737 1750 N/A INTRINSIC
low complexity region 1754 1804 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000131724
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000122466
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000134009
AA Change: N296Y

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000120618
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 513 2.52e-7 SMART
CA 534 601 4.52e-2 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000125517
AA Change: N296Y

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000115399
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
low complexity region 430 468 N/A INTRINSIC
low complexity region 521 584 N/A INTRINSIC
low complexity region 610 641 N/A INTRINSIC
low complexity region 657 685 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000125055
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000114326
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
low complexity region 649 665 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000126920
AA Change: N274Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000121939
Gene: ENSMUSG00000052613
AA Change: N274Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 42 123 1.22e-1 SMART
CA 152 241 5.48e-8 SMART
CA 282 371 1.94e-8 SMART
CA 404 485 2.29e-10 SMART
CA 509 591 4.88e-14 SMART
CA 616 693 4.65e-20 SMART
CA 717 795 1.93e-26 SMART
CA 819 902 5.69e-15 SMART
CA 926 1012 6.85e-9 SMART
CA 1033 1120 3.09e-16 SMART
CA 1144 1228 4.49e-4 SMART
transmembrane domain 1353 1375 N/A INTRINSIC
low complexity region 1396 1423 N/A INTRINSIC
low complexity region 1634 1651 N/A INTRINSIC
low complexity region 1713 1733 N/A INTRINSIC
low complexity region 1740 1753 N/A INTRINSIC
low complexity region 1757 1807 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000136096
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000121534
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
low complexity region 649 665 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000131321
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000122911
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1654 1671 N/A INTRINSIC
low complexity region 1733 1753 N/A INTRINSIC
low complexity region 1760 1773 N/A INTRINSIC
low complexity region 1777 1827 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000144302
SMART Domains Protein: ENSMUSP00000122606
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
low complexity region 313 326 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000124046
SMART Domains Protein: ENSMUSP00000121130
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
CA 30 118 7.87e-9 SMART
CA 142 224 4.88e-14 SMART
CA 249 326 4.65e-20 SMART
CA 350 428 1.93e-26 SMART
CA 452 535 5.69e-15 SMART
CA 559 645 6.85e-9 SMART
CA 666 753 3.09e-16 SMART
CA 777 861 4.49e-4 SMART
transmembrane domain 986 1008 N/A INTRINSIC
low complexity region 1029 1056 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000146682
SMART Domains Protein: ENSMUSP00000134863
Gene: ENSMUSG00000052613

DomainStartEndE-ValueType
transmembrane domain 128 150 N/A INTRINSIC
low complexity region 215 232 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000195531
AA Change: N296Y

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000141920
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 507 1.2e-12 SMART
CA 531 613 2.3e-16 SMART
CA 638 715 2.3e-22 SMART
CA 739 817 9.3e-29 SMART
CA 841 924 2.8e-17 SMART
CA 948 1034 3.3e-11 SMART
CA 1055 1142 1.5e-18 SMART
CA 1166 1250 2.3e-6 SMART
transmembrane domain 1377 1399 N/A INTRINSIC
low complexity region 1415 1442 N/A INTRINSIC
low complexity region 1514 1531 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000177420
AA Change: N301Y

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000135849
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1127 4.52e-2 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000193739
AA Change: N301Y

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000142173
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1382 1404 N/A INTRINSIC
low complexity region 1420 1447 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000151116
AA Change: N301Y

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000119662
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 519 7.87e-9 SMART
CA 543 625 4.88e-14 SMART
CA 650 727 4.65e-20 SMART
CA 751 829 1.93e-26 SMART
CA 853 936 5.69e-15 SMART
CA 960 1046 6.85e-9 SMART
CA 1067 1154 3.09e-16 SMART
CA 1178 1262 4.49e-4 SMART
transmembrane domain 1387 1409 N/A INTRINSIC
low complexity region 1430 1457 N/A INTRINSIC
low complexity region 1489 1519 N/A INTRINSIC
low complexity region 1521 1539 N/A INTRINSIC
low complexity region 1592 1655 N/A INTRINSIC
low complexity region 1681 1712 N/A INTRINSIC
low complexity region 1728 1756 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000193174
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000142238
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 514 3.8e-11 SMART
CA 538 620 2.3e-16 SMART
CA 645 722 2.3e-22 SMART
CA 746 824 9.3e-29 SMART
CA 848 931 2.8e-17 SMART
CA 955 1041 3.3e-11 SMART
CA 1062 1149 1.5e-18 SMART
CA 1173 1257 2.3e-6 SMART
transmembrane domain 1382 1404 N/A INTRINSIC
low complexity region 1425 1452 N/A INTRINSIC
low complexity region 1482 1512 N/A INTRINSIC
low complexity region 1514 1532 N/A INTRINSIC
low complexity region 1585 1648 N/A INTRINSIC
low complexity region 1674 1705 N/A INTRINSIC
low complexity region 1721 1749 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000177107
AA Change: N301Y

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000135501
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1482 1499 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000191709
AA Change: N301Y

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000142313
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1480 1510 N/A INTRINSIC
low complexity region 1512 1530 N/A INTRINSIC
low complexity region 1583 1646 N/A INTRINSIC
low complexity region 1672 1703 N/A INTRINSIC
low complexity region 1719 1747 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000193361
AA Change: N301Y

PolyPhen 2 Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000141792
Gene: ENSMUSG00000052613
AA Change: N301Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 69 150 1.22e-1 SMART
CA 179 268 5.48e-8 SMART
CA 309 398 1.94e-8 SMART
CA 431 512 2.29e-10 SMART
CA 536 618 4.88e-14 SMART
CA 643 720 4.65e-20 SMART
CA 744 822 1.93e-26 SMART
CA 846 929 5.69e-15 SMART
CA 953 1039 6.85e-9 SMART
CA 1060 1147 3.09e-16 SMART
CA 1171 1255 4.49e-4 SMART
transmembrane domain 1380 1402 N/A INTRINSIC
low complexity region 1423 1450 N/A INTRINSIC
low complexity region 1661 1678 N/A INTRINSIC
low complexity region 1740 1760 N/A INTRINSIC
low complexity region 1767 1780 N/A INTRINSIC
low complexity region 1784 1834 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000152819
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000123647
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
Blast:CA 304 363 1e-33 BLAST
low complexity region 364 399 N/A INTRINSIC
low complexity region 452 515 N/A INTRINSIC
low complexity region 541 572 N/A INTRINSIC
low complexity region 588 616 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000149977
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000118833
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000152655
AA Change: N296Y

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000118201
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 6e-4 SMART
CA 174 263 2.8e-10 SMART
CA 304 393 9.4e-11 SMART
CA 426 507 1.2e-12 SMART
CA 531 613 2.3e-16 SMART
CA 638 726 3.4e-6 SMART
low complexity region 783 846 N/A INTRINSIC
low complexity region 872 903 N/A INTRINSIC
low complexity region 919 947 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000147189
AA Change: N259Y

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000122940
Gene: ENSMUSG00000052613
AA Change: N259Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
low complexity region 209 225 N/A INTRINSIC
CA 267 356 1.94e-8 SMART
CA 389 470 2.29e-10 SMART
CA 494 576 4.88e-14 SMART
CA 601 678 4.65e-20 SMART
CA 702 780 1.93e-26 SMART
CA 804 887 5.69e-15 SMART
CA 911 997 6.85e-9 SMART
CA 1018 1105 3.09e-16 SMART
CA 1129 1213 4.49e-4 SMART
transmembrane domain 1340 1362 N/A INTRINSIC
low complexity region 1378 1405 N/A INTRINSIC
low complexity region 1614 1631 N/A INTRINSIC
low complexity region 1693 1713 N/A INTRINSIC
low complexity region 1720 1733 N/A INTRINSIC
low complexity region 1737 1787 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000155701
AA Change: N296Y

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000135495
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
Blast:CA 304 330 2e-8 BLAST
Predicted Effect probably damaging
Transcript: ENSMUST00000191854
AA Change: N296Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000141973
Gene: ENSMUSG00000052613
AA Change: N296Y

DomainStartEndE-ValueType
signal peptide 1 26 N/A INTRINSIC
CA 64 145 1.22e-1 SMART
CA 174 263 5.48e-8 SMART
CA 304 393 1.94e-8 SMART
CA 426 507 2.29e-10 SMART
CA 531 613 4.88e-14 SMART
CA 638 715 4.65e-20 SMART
CA 739 817 1.93e-26 SMART
CA 841 924 5.69e-15 SMART
CA 948 1034 6.85e-9 SMART
CA 1055 1142 3.09e-16 SMART
CA 1166 1250 4.49e-4 SMART
transmembrane domain 1375 1397 N/A INTRINSIC
low complexity region 1418 1445 N/A INTRINSIC
low complexity region 1477 1494 N/A INTRINSIC
Meta Mutation Damage Score 0.1693 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.2%
  • 10x: 96.0%
  • 20x: 91.2%
Validation Efficiency 99% (102/103)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a member of the cadherin superfamily. Family members encode integral membrane proteins that mediate calcium-dependent cell-cell adhesion. It plays an essential role in maintenance of normal retinal and cochlear function. Mutations in this gene result in hearing loss and Usher Syndrome Type IF (USH1F). Extensive alternative splicing resulting in multiple isoforms has been observed in the mouse ortholog. Similar alternatively spliced transcripts are inferred to occur in human, and additional variants are likely to occur. [provided by RefSeq, Dec 2008]
PHENOTYPE: Homozygotes for severe mutations exhibit circling, head-tossing, hyperactivity, impaired swimming and profound deafness. Mice have defects in cochlea and degeneration of hair cells, spiral ganglion cells and saccular macula. Females are poor mothers. [provided by MGI curators]
Allele List at MGI

All alleles(11) : Gene trapped(2) Transgenic(1) Spontaneous(6) Chemically induced(2)

Other mutations in this stock
Total: 101 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcg3 A G 5: 105,125,482 (GRCm39) I67T probably damaging Het
Acoxl G A 2: 127,722,423 (GRCm39) probably null Het
Adam10 T A 9: 70,655,530 (GRCm39) W333R probably damaging Het
Ahnak C T 19: 8,995,596 (GRCm39) R5627* probably null Het
Alms1 A T 6: 85,597,351 (GRCm39) R1195* probably null Het
Ap2m1 T A 16: 20,360,990 (GRCm39) I334N possibly damaging Het
Brd8dc A T 18: 34,729,204 (GRCm39) D42E probably damaging Het
Camta1 C A 4: 151,159,597 (GRCm39) R1614L probably damaging Het
Ccdc110 T A 8: 46,388,194 (GRCm39) N50K probably benign Het
Ccdc168 T A 1: 44,100,257 (GRCm39) K280N possibly damaging Het
Cdhr1 T C 14: 36,802,633 (GRCm39) Y610C probably damaging Het
Cdkal1 C A 13: 29,875,579 (GRCm39) probably null Het
Celsr3 G A 9: 108,704,204 (GRCm39) C229Y possibly damaging Het
Clca4b A T 3: 144,619,112 (GRCm39) Y676N probably damaging Het
Col11a1 A T 3: 113,899,105 (GRCm39) probably benign Het
Cpe T A 8: 65,064,501 (GRCm39) I233F probably damaging Het
Cpsf1 A T 15: 76,487,857 (GRCm39) probably benign Het
Cpsf2 T C 12: 101,955,045 (GRCm39) V272A probably damaging Het
Creld2 A T 15: 88,704,159 (GRCm39) N50I probably damaging Het
Cyb5r1 T C 1: 134,337,430 (GRCm39) probably benign Het
Dcaf11 T C 14: 55,806,537 (GRCm39) V446A probably damaging Het
Defa34 A G 8: 22,155,988 (GRCm39) probably null Het
Dgat1 T C 15: 76,395,767 (GRCm39) Y72C possibly damaging Het
Efr3b G T 12: 4,032,058 (GRCm39) D183E probably benign Het
Enpp3 A T 10: 24,652,679 (GRCm39) D759E probably damaging Het
Epyc A G 10: 97,485,625 (GRCm39) T22A probably benign Het
Etfbkmt C T 6: 149,052,082 (GRCm39) R96W probably benign Het
Fam83b G T 9: 76,400,108 (GRCm39) L332I possibly damaging Het
Fat3 C A 9: 15,910,981 (GRCm39) E1674* probably null Het
Fbn1 A G 2: 125,184,845 (GRCm39) probably benign Het
Gm5134 C A 10: 75,810,079 (GRCm39) T120N probably benign Het
Gmip C T 8: 70,268,259 (GRCm39) probably benign Het
Gpbp1 G T 13: 111,577,279 (GRCm39) Q204K possibly damaging Het
Gpr108 T C 17: 57,542,358 (GRCm39) D549G possibly damaging Het
Gsdme C A 6: 50,223,107 (GRCm39) probably benign Het
Gucy2e T C 11: 69,126,402 (GRCm39) D326G probably benign Het
H2-Eb2 C T 17: 34,553,218 (GRCm39) Q135* probably null Het
Hectd4 T A 5: 121,419,959 (GRCm39) Y635N possibly damaging Het
Hectd4 G A 5: 121,443,736 (GRCm39) E1319K possibly damaging Het
Hs3st2 T C 7: 121,099,792 (GRCm39) S213P probably damaging Het
Ikbkb A T 8: 23,161,651 (GRCm39) C412* probably null Het
Itpr2 T C 6: 146,319,477 (GRCm39) T188A possibly damaging Het
Kcnh1 T A 1: 192,101,249 (GRCm39) probably benign Het
Kctd21 T C 7: 96,996,748 (GRCm39) F74L probably damaging Het
Krt23 T A 11: 99,377,608 (GRCm39) I133L probably damaging Het
Krt74 T C 15: 101,671,751 (GRCm39) noncoding transcript Het
Krt81 C A 15: 101,361,508 (GRCm39) R24L possibly damaging Het
Lmtk3 T A 7: 45,443,536 (GRCm39) L740M possibly damaging Het
Lrrc10 T A 10: 116,881,695 (GRCm39) L123Q probably damaging Het
Map1a A T 2: 121,136,255 (GRCm39) H2357L probably benign Het
Mbl1 A G 14: 40,880,706 (GRCm39) N198S probably damaging Het
Mcf2l A G 8: 13,047,337 (GRCm39) D233G probably damaging Het
Msto1 A G 3: 88,818,848 (GRCm39) L269P probably benign Het
Mtss1 A T 15: 58,828,387 (GRCm39) D175E probably benign Het
Myef2 A T 2: 124,950,954 (GRCm39) probably benign Het
Neb A T 2: 52,180,755 (GRCm39) probably benign Het
Or14a259 T C 7: 86,013,035 (GRCm39) N170S probably benign Het
Or4a39 A T 2: 89,237,135 (GRCm39) M96K probably damaging Het
Or5w15 A G 2: 87,567,825 (GRCm39) V281A probably damaging Het
Parp2 T A 14: 51,057,130 (GRCm39) Y361N probably damaging Het
Parp3 A G 9: 106,348,995 (GRCm39) F466L possibly damaging Het
Pdzrn3 A T 6: 101,128,014 (GRCm39) I884N probably damaging Het
Pim1 T C 17: 29,712,883 (GRCm39) probably benign Het
Pou6f2 A G 13: 18,314,308 (GRCm39) probably benign Het
Prelid3b A G 2: 174,307,743 (GRCm39) probably benign Het
Proc G A 18: 32,258,171 (GRCm39) T258I probably benign Het
Rab3gap2 T C 1: 184,992,705 (GRCm39) probably benign Het
Rb1cc1 A C 1: 6,319,395 (GRCm39) K938T probably benign Het
Rem2 T C 14: 54,713,754 (GRCm39) probably benign Het
Rif1 GCCACCA GCCA 2: 52,000,336 (GRCm39) probably benign Het
Rin2 A G 2: 145,702,953 (GRCm39) K550E probably benign Het
Rps6ka4 G T 19: 6,817,866 (GRCm39) T17N probably benign Het
Rtn4 T A 11: 29,683,849 (GRCm39) probably benign Het
Ruvbl2 C T 7: 45,080,730 (GRCm39) probably benign Het
Scaper A G 9: 55,665,346 (GRCm39) probably benign Het
Sdc2 T C 15: 33,017,235 (GRCm39) probably benign Het
Semp2l1 T A 1: 32,584,956 (GRCm39) N318I possibly damaging Het
Slc35e1 T C 8: 73,246,415 (GRCm39) probably benign Het
Slco2b1 T A 7: 99,310,743 (GRCm39) M603L probably benign Het
Smpdl3b A G 4: 132,472,449 (GRCm39) V108A probably damaging Het
Sptbn4 C T 7: 27,060,991 (GRCm39) probably null Het
Srrm1 G A 4: 135,065,854 (GRCm39) probably benign Het
Ssh1 A T 5: 114,084,766 (GRCm39) D448E probably benign Het
Ssmem1 A T 6: 30,519,547 (GRCm39) probably null Het
Sv2b T G 7: 74,786,140 (GRCm39) M427L probably benign Het
Syne1 A G 10: 5,317,600 (GRCm39) L498P probably damaging Het
Syne2 T C 12: 75,900,923 (GRCm39) probably null Het
Taf6l G T 19: 8,755,885 (GRCm39) H254Q probably benign Het
Traf3ip3 T A 1: 192,860,539 (GRCm39) probably null Het
Trpm1 G A 7: 63,873,506 (GRCm39) G587D probably damaging Het
Ttn A G 2: 76,560,756 (GRCm39) V29215A probably damaging Het
Ubr4 T G 4: 139,157,534 (GRCm39) S2364A probably benign Het
Ush2a T A 1: 188,466,860 (GRCm39) probably benign Het
Vmn2r100 C A 17: 19,742,382 (GRCm39) P252Q possibly damaging Het
Vmn2r57 A T 7: 41,077,216 (GRCm39) S317T possibly damaging Het
Vwa2 A G 19: 56,886,500 (GRCm39) probably benign Het
Wdr73 G A 7: 80,547,698 (GRCm39) Q107* probably null Het
Zbtb10 T A 3: 9,329,728 (GRCm39) V362E probably damaging Het
Zfp217 C T 2: 169,957,382 (GRCm39) A539T probably benign Het
Zfp296 A T 7: 19,311,831 (GRCm39) M113L probably benign Het
Zfp729b A T 13: 67,739,253 (GRCm39) V1004E probably benign Het
Other mutations in Pcdh15
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00421:Pcdh15 APN 10 74,021,177 (GRCm39) nonsense probably null
IGL00432:Pcdh15 APN 10 74,126,914 (GRCm39) splice site probably benign
IGL00533:Pcdh15 APN 10 74,338,552 (GRCm39) missense probably damaging 1.00
IGL00596:Pcdh15 APN 10 74,466,576 (GRCm39) missense probably benign 0.00
IGL00930:Pcdh15 APN 10 74,466,530 (GRCm39) missense probably benign 0.08
IGL00970:Pcdh15 APN 10 74,215,172 (GRCm39) missense probably damaging 1.00
IGL01087:Pcdh15 APN 10 74,178,464 (GRCm39) missense possibly damaging 0.90
IGL01763:Pcdh15 APN 10 74,046,293 (GRCm39) missense probably benign 0.09
IGL01787:Pcdh15 APN 10 74,286,115 (GRCm39) missense probably benign 0.25
IGL02070:Pcdh15 APN 10 74,466,700 (GRCm39) missense probably benign 0.00
IGL02234:Pcdh15 APN 10 74,467,694 (GRCm39) missense probably benign 0.02
IGL02268:Pcdh15 APN 10 74,178,504 (GRCm39) missense probably damaging 1.00
IGL02280:Pcdh15 APN 10 74,058,295 (GRCm39) missense probably damaging 1.00
IGL02363:Pcdh15 APN 10 74,152,918 (GRCm39) missense probably damaging 0.98
IGL02420:Pcdh15 APN 10 74,138,938 (GRCm39) missense probably damaging 0.98
IGL02749:Pcdh15 APN 10 74,466,900 (GRCm39) missense probably benign 0.00
IGL02939:Pcdh15 APN 10 74,340,648 (GRCm39) splice site probably benign
IGL02970:Pcdh15 APN 10 74,126,794 (GRCm39) splice site probably benign
IGL03010:Pcdh15 APN 10 74,221,777 (GRCm39) missense probably damaging 1.00
IGL03061:Pcdh15 APN 10 74,152,843 (GRCm39) missense probably damaging 0.97
IGL03095:Pcdh15 APN 10 74,191,706 (GRCm39) missense probably damaging 1.00
IGL03149:Pcdh15 APN 10 74,466,527 (GRCm39) missense probably damaging 1.00
IGL03187:Pcdh15 APN 10 74,191,706 (GRCm39) missense probably damaging 1.00
IGL03279:Pcdh15 APN 10 74,152,904 (GRCm39) missense probably damaging 1.00
IGL03392:Pcdh15 APN 10 74,460,104 (GRCm39) missense probably damaging 1.00
loop UTSW 10 74,021,210 (GRCm39) missense probably damaging 1.00
mcduck UTSW 10 74,462,676 (GRCm39) critical splice donor site probably null
spaz UTSW 10 74,046,257 (GRCm39) missense probably damaging 1.00
sphere UTSW 10 74,460,116 (GRCm39) missense probably damaging 1.00
squirm UTSW 10 0 () large deletion
Tortilla UTSW 10 74,215,249 (GRCm39) splice site probably null
1mM(1):Pcdh15 UTSW 10 74,461,969 (GRCm39) intron probably benign
BB009:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
BB019:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
R0038:Pcdh15 UTSW 10 74,479,272 (GRCm39) missense possibly damaging 0.95
R0103:Pcdh15 UTSW 10 74,046,257 (GRCm39) missense probably damaging 1.00
R0110:Pcdh15 UTSW 10 74,126,808 (GRCm39) missense probably damaging 1.00
R0111:Pcdh15 UTSW 10 74,462,651 (GRCm39) nonsense probably null
R0119:Pcdh15 UTSW 10 74,006,407 (GRCm39) missense probably damaging 1.00
R0131:Pcdh15 UTSW 10 74,006,440 (GRCm39) missense probably null 1.00
R0445:Pcdh15 UTSW 10 74,178,381 (GRCm39) missense probably damaging 1.00
R0464:Pcdh15 UTSW 10 74,462,676 (GRCm39) critical splice donor site probably null
R0503:Pcdh15 UTSW 10 74,046,217 (GRCm39) missense probably damaging 1.00
R0507:Pcdh15 UTSW 10 74,457,129 (GRCm39) missense probably damaging 1.00
R0742:Pcdh15 UTSW 10 74,457,129 (GRCm39) missense probably damaging 1.00
R0790:Pcdh15 UTSW 10 74,466,885 (GRCm39) missense probably benign 0.01
R0829:Pcdh15 UTSW 10 74,338,598 (GRCm39) missense probably damaging 1.00
R0839:Pcdh15 UTSW 10 74,462,614 (GRCm39) missense probably null 1.00
R0882:Pcdh15 UTSW 10 74,178,488 (GRCm39) missense probably damaging 1.00
R0894:Pcdh15 UTSW 10 74,460,087 (GRCm39) missense probably damaging 1.00
R0944:Pcdh15 UTSW 10 74,046,302 (GRCm39) missense probably damaging 0.99
R1081:Pcdh15 UTSW 10 74,286,145 (GRCm39) missense probably damaging 1.00
R1148:Pcdh15 UTSW 10 74,006,392 (GRCm39) missense probably damaging 1.00
R1148:Pcdh15 UTSW 10 74,006,392 (GRCm39) missense probably damaging 1.00
R1484:Pcdh15 UTSW 10 74,126,833 (GRCm39) missense probably damaging 1.00
R1521:Pcdh15 UTSW 10 74,430,023 (GRCm39) missense probably damaging 1.00
R1694:Pcdh15 UTSW 10 74,429,995 (GRCm39) missense probably damaging 1.00
R1795:Pcdh15 UTSW 10 74,460,087 (GRCm39) missense probably damaging 1.00
R2021:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2022:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2023:Pcdh15 UTSW 10 74,467,025 (GRCm39) missense possibly damaging 0.93
R2076:Pcdh15 UTSW 10 74,178,479 (GRCm39) missense probably damaging 1.00
R2199:Pcdh15 UTSW 10 74,006,341 (GRCm39) missense probably damaging 1.00
R2510:Pcdh15 UTSW 10 74,467,331 (GRCm39) missense probably benign 0.39
R2511:Pcdh15 UTSW 10 74,481,828 (GRCm39) missense possibly damaging 0.94
R3418:Pcdh15 UTSW 10 74,420,054 (GRCm39) missense probably benign 0.12
R3419:Pcdh15 UTSW 10 74,420,054 (GRCm39) missense probably benign 0.12
R3433:Pcdh15 UTSW 10 74,467,331 (GRCm39) missense probably benign 0.39
R3619:Pcdh15 UTSW 10 74,479,227 (GRCm39) missense probably benign 0.19
R3723:Pcdh15 UTSW 10 74,481,680 (GRCm39) missense probably benign 0.05
R3724:Pcdh15 UTSW 10 74,481,680 (GRCm39) missense probably benign 0.05
R3778:Pcdh15 UTSW 10 73,782,983 (GRCm39) splice site probably null
R3851:Pcdh15 UTSW 10 74,467,518 (GRCm39) missense probably damaging 0.97
R4175:Pcdh15 UTSW 10 74,467,829 (GRCm39) intron probably benign
R4261:Pcdh15 UTSW 10 74,481,512 (GRCm39) missense probably damaging 1.00
R4385:Pcdh15 UTSW 10 74,386,322 (GRCm39) missense probably damaging 1.00
R4585:Pcdh15 UTSW 10 74,460,116 (GRCm39) missense probably damaging 1.00
R4602:Pcdh15 UTSW 10 74,430,046 (GRCm39) missense probably damaging 1.00
R4639:Pcdh15 UTSW 10 74,479,439 (GRCm39) missense probably benign 0.00
R4703:Pcdh15 UTSW 10 74,285,995 (GRCm39) missense probably damaging 1.00
R4819:Pcdh15 UTSW 10 74,160,221 (GRCm39) missense probably damaging 1.00
R4906:Pcdh15 UTSW 10 74,340,625 (GRCm39) nonsense probably null
R4961:Pcdh15 UTSW 10 74,215,249 (GRCm39) splice site probably null
R5018:Pcdh15 UTSW 10 74,479,607 (GRCm39) missense possibly damaging 0.68
R5125:Pcdh15 UTSW 10 74,419,912 (GRCm39) missense probably damaging 0.98
R5225:Pcdh15 UTSW 10 74,138,986 (GRCm39) missense probably damaging 1.00
R5259:Pcdh15 UTSW 10 74,232,204 (GRCm39) missense possibly damaging 0.67
R5279:Pcdh15 UTSW 10 74,430,015 (GRCm39) missense probably damaging 1.00
R5395:Pcdh15 UTSW 10 74,021,119 (GRCm39) missense probably damaging 1.00
R5458:Pcdh15 UTSW 10 74,340,611 (GRCm39) missense probably damaging 1.00
R5617:Pcdh15 UTSW 10 74,471,504 (GRCm39) intron probably benign
R5665:Pcdh15 UTSW 10 74,462,620 (GRCm39) missense probably damaging 1.00
R5770:Pcdh15 UTSW 10 74,021,177 (GRCm39) nonsense probably null
R5805:Pcdh15 UTSW 10 74,066,091 (GRCm39) missense probably damaging 1.00
R5914:Pcdh15 UTSW 10 74,466,768 (GRCm39) missense probably benign 0.42
R5988:Pcdh15 UTSW 10 74,215,189 (GRCm39) missense probably benign 0.05
R6133:Pcdh15 UTSW 10 74,481,805 (GRCm39) splice site probably null
R6189:Pcdh15 UTSW 10 74,178,483 (GRCm39) missense probably null 1.00
R6414:Pcdh15 UTSW 10 74,021,258 (GRCm39) missense probably damaging 1.00
R6536:Pcdh15 UTSW 10 74,467,221 (GRCm39) missense probably damaging 1.00
R6612:Pcdh15 UTSW 10 74,021,210 (GRCm39) missense probably damaging 1.00
R6711:Pcdh15 UTSW 10 74,478,219 (GRCm39) missense possibly damaging 0.83
R6793:Pcdh15 UTSW 10 74,466,971 (GRCm39) missense probably damaging 1.00
R6841:Pcdh15 UTSW 10 74,286,052 (GRCm39) missense probably damaging 1.00
R6845:Pcdh15 UTSW 10 74,466,465 (GRCm39) missense probably benign
R6915:Pcdh15 UTSW 10 74,479,641 (GRCm39) missense probably benign 0.16
R6954:Pcdh15 UTSW 10 74,481,821 (GRCm39) missense possibly damaging 0.92
R6970:Pcdh15 UTSW 10 74,338,519 (GRCm39) missense probably damaging 0.98
R7018:Pcdh15 UTSW 10 74,302,186 (GRCm39) missense probably damaging 1.00
R7064:Pcdh15 UTSW 10 74,466,446 (GRCm39) missense possibly damaging 0.67
R7079:Pcdh15 UTSW 10 74,152,957 (GRCm39) missense probably benign 0.21
R7172:Pcdh15 UTSW 10 74,338,597 (GRCm39) missense probably damaging 1.00
R7220:Pcdh15 UTSW 10 74,178,441 (GRCm39) missense possibly damaging 0.64
R7237:Pcdh15 UTSW 10 74,420,023 (GRCm39) missense possibly damaging 0.88
R7266:Pcdh15 UTSW 10 74,215,222 (GRCm39) nonsense probably null
R7276:Pcdh15 UTSW 10 74,160,224 (GRCm39) missense probably benign 0.25
R7359:Pcdh15 UTSW 10 74,420,048 (GRCm39) missense probably damaging 0.99
R7396:Pcdh15 UTSW 10 74,466,522 (GRCm39) missense probably benign 0.17
R7421:Pcdh15 UTSW 10 74,289,897 (GRCm39) missense possibly damaging 0.90
R7424:Pcdh15 UTSW 10 74,342,317 (GRCm39) missense probably benign 0.09
R7463:Pcdh15 UTSW 10 74,467,602 (GRCm39) missense possibly damaging 0.66
R7469:Pcdh15 UTSW 10 74,481,812 (GRCm39) missense probably benign
R7512:Pcdh15 UTSW 10 74,477,214 (GRCm39) missense possibly damaging 0.81
R7767:Pcdh15 UTSW 10 74,322,088 (GRCm39) missense probably benign 0.07
R7830:Pcdh15 UTSW 10 74,221,733 (GRCm39) missense probably damaging 1.00
R7890:Pcdh15 UTSW 10 74,478,146 (GRCm39) missense probably damaging 1.00
R7897:Pcdh15 UTSW 10 74,289,827 (GRCm39) missense probably damaging 1.00
R7908:Pcdh15 UTSW 10 74,479,414 (GRCm39) missense probably benign 0.04
R7932:Pcdh15 UTSW 10 74,481,359 (GRCm39) missense probably benign 0.18
R7940:Pcdh15 UTSW 10 74,430,022 (GRCm39) missense probably damaging 1.00
R8230:Pcdh15 UTSW 10 74,191,707 (GRCm39) missense probably damaging 1.00
R8307:Pcdh15 UTSW 10 74,342,307 (GRCm39) nonsense probably null
R8382:Pcdh15 UTSW 10 74,479,227 (GRCm39) missense probably benign 0.19
R8397:Pcdh15 UTSW 10 74,126,865 (GRCm39) missense probably damaging 1.00
R8498:Pcdh15 UTSW 10 74,317,974 (GRCm39) missense probably damaging 1.00
R8692:Pcdh15 UTSW 10 74,289,805 (GRCm39) missense possibly damaging 0.63
R8797:Pcdh15 UTSW 10 74,419,978 (GRCm39) missense probably damaging 1.00
R9020:Pcdh15 UTSW 10 74,481,443 (GRCm39) missense probably benign 0.01
R9033:Pcdh15 UTSW 10 74,302,138 (GRCm39) missense probably damaging 1.00
R9056:Pcdh15 UTSW 10 74,221,731 (GRCm39) missense probably damaging 1.00
R9177:Pcdh15 UTSW 10 74,479,455 (GRCm39) missense probably benign 0.13
R9191:Pcdh15 UTSW 10 74,161,981 (GRCm39) missense probably benign 0.38
R9268:Pcdh15 UTSW 10 74,479,455 (GRCm39) missense probably benign 0.13
R9279:Pcdh15 UTSW 10 74,461,756 (GRCm39) intron probably benign
R9294:Pcdh15 UTSW 10 74,479,560 (GRCm39) missense unknown
R9387:Pcdh15 UTSW 10 74,066,192 (GRCm39) missense probably damaging 0.98
R9409:Pcdh15 UTSW 10 74,160,190 (GRCm39) missense probably damaging 0.98
R9410:Pcdh15 UTSW 10 74,481,663 (GRCm39) frame shift probably null
R9412:Pcdh15 UTSW 10 74,481,663 (GRCm39) frame shift probably null
R9432:Pcdh15 UTSW 10 74,460,170 (GRCm39) missense probably damaging 1.00
R9444:Pcdh15 UTSW 10 74,478,176 (GRCm39) missense probably damaging 1.00
R9579:Pcdh15 UTSW 10 74,457,117 (GRCm39) missense possibly damaging 0.89
R9643:Pcdh15 UTSW 10 74,479,335 (GRCm39) missense probably benign 0.18
R9784:Pcdh15 UTSW 10 74,467,212 (GRCm39) missense probably benign 0.00
RF020:Pcdh15 UTSW 10 74,021,242 (GRCm39) missense probably damaging 1.00
Z1176:Pcdh15 UTSW 10 74,466,533 (GRCm39) missense probably benign 0.00
Z1177:Pcdh15 UTSW 10 74,340,632 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- GCACACATAGCTACTACAGGCTTTCG -3'
(R):5'- GCTTAAACATTTTCAGAGGAGAAACGGG -3'

Sequencing Primer
(F):5'- ATAGCTACTACAGGCTTTCGTTTTG -3'
(R):5'- GAAACGGGCTATGTGTTTCTATATC -3'
Posted On 2013-06-12