Mutagenetix > Incidental Mutation

Incidental Mutation 'R7049:Tubal3'

547494

Institutional Source

Beutler Lab

Gene Symbol

Tubal3

Ensembl Gene

ENSMUSG00000021216

Gene Name

tubulin, alpha-like 3

Synonyms

MMRRC Submission

045147-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.206) question?

Stock #

R7049 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

3974695-3985277 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 3982756 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Histidine at position 179 (Y179H)

Ref Sequence

ENSEMBL: ENSMUSP00000021639 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021639]

AlphaFold

Q3UX10

Predicted Effect

probably damaging
Transcript: ENSMUST00000021639
AA Change: Y179H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000021639
Gene: ENSMUSG00000021216
AA Change: Y179H

Domain	Start	End	E-Value	Type
Tubulin	56	253	9.39e-66	SMART
Tubulin_C	255	400	8.93e-49	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.8%

Validation Efficiency

100% (46/46)

Allele List at MGI

Other mutations in this stock

Total: 43 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca4	T	C	3: 121,941,497 (GRCm39)	V447A	probably benign	Het
Adam6b	A	G	12: 113,454,122 (GRCm39)	D313G	probably damaging	Het
Adcy10	G	T	1: 165,367,443 (GRCm39)	C571F	probably damaging	Het
Anxa1	A	G	19: 20,352,635 (GRCm39)	V313A	probably benign	Het
Bpifb6	A	T	2: 153,750,733 (GRCm39)		probably null	Het
Cacna1c	C	A	6: 118,578,124 (GRCm39)	C1713F	probably benign	Het
Cep135	A	G	5: 76,754,585 (GRCm39)	N354S	probably benign	Het
Cers2	A	G	3: 95,228,965 (GRCm39)	D200G	probably damaging	Het
Cpne1	A	G	2: 155,920,727 (GRCm39)	L133P	probably damaging	Het
Ddhd1	A	G	14: 45,840,138 (GRCm39)	Y16H	probably damaging	Het
Depp1	T	C	6: 116,629,254 (GRCm39)	L199P	probably damaging	Het
Fastkd2	T	C	1: 63,771,009 (GRCm39)	F122L	probably benign	Het
Fastkd5	A	T	2: 130,457,431 (GRCm39)	D386E	probably damaging	Het
Gm5134	T	A	10: 75,828,292 (GRCm39)	C291S	probably damaging	Het
Gria2	T	C	3: 80,596,634 (GRCm39)	S811G	probably damaging	Het
Hcn1	C	T	13: 118,111,998 (GRCm39)	P654L	unknown	Het
Hrnr	C	A	3: 93,230,461 (GRCm39)	S233*	probably null	Het
Hspa5	C	T	2: 34,663,204 (GRCm39)	P127L	probably damaging	Het
Itgal	A	T	7: 126,895,573 (GRCm39)		probably benign	Het
L3mbtl4	G	T	17: 68,768,561 (GRCm39)	R223L	probably benign	Het
Mical1	A	G	10: 41,358,246 (GRCm39)	R420G	possibly damaging	Het
Mllt6	T	A	11: 97,564,637 (GRCm39)	L481Q	probably damaging	Het
Mtdh	T	A	15: 34,131,311 (GRCm39)	N174K	probably damaging	Het
Nhsl1	A	G	10: 18,407,386 (GRCm39)	M1507V	probably damaging	Het
Npm3	A	T	19: 45,737,994 (GRCm39)	M1K	probably null	Het
Or1e21	C	T	11: 73,344,430 (GRCm39)	G203R	probably damaging	Het
Pold1	A	T	7: 44,190,795 (GRCm39)	W290R	possibly damaging	Het
Prss52	C	T	14: 64,350,021 (GRCm39)	T216I	probably damaging	Het
Psme4	T	C	11: 30,763,904 (GRCm39)		probably null	Het
Pwwp2a	T	A	11: 43,597,018 (GRCm39)	F453I	probably damaging	Het
Rttn	A	G	18: 89,082,340 (GRCm39)	N1422S	probably damaging	Het
Scaf4	A	C	16: 90,057,075 (GRCm39)	I92R	unknown	Het
Slc12a1	A	G	2: 125,013,177 (GRCm39)	K345E	probably benign	Het
Slc22a28	A	T	19: 8,049,270 (GRCm39)	N326K	probably benign	Het
Smgc	A	G	15: 91,744,576 (GRCm39)	E311G	possibly damaging	Het
Snx7	C	T	3: 117,633,680 (GRCm39)	R90H	possibly damaging	Het
Tex101	A	G	7: 24,367,683 (GRCm39)	I223T	probably benign	Het
Tnik	A	T	3: 28,715,853 (GRCm39)	K1093*	probably null	Het
Tnxb	T	G	17: 34,936,242 (GRCm39)		probably null	Het
Trio	T	C	15: 27,749,885 (GRCm39)	N2272S	possibly damaging	Het
Vmn2r4	C	T	3: 64,296,550 (GRCm39)	G745D	probably benign	Het
Vps9d1	A	T	8: 123,973,882 (GRCm39)	Y300*	probably null	Het
Zfp646	T	A	7: 127,479,199 (GRCm39)	C459S	possibly damaging	Het

Other mutations in Tubal3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00595:Tubal3	APN	13	3,983,015 (GRCm39)	missense	probably damaging	1.00
IGL02053:Tubal3	APN	13	3,983,159 (GRCm39)	missense	probably damaging	0.97
IGL02120:Tubal3	APN	13	3,980,675 (GRCm39)	missense	probably damaging	0.96
IGL02426:Tubal3	APN	13	3,982,750 (GRCm39)	missense	probably damaging	0.99
IGL02548:Tubal3	APN	13	3,980,554 (GRCm39)	missense	probably benign	0.05
IGL02981:Tubal3	APN	13	3,983,257 (GRCm39)	missense	probably benign	0.02
R0458:Tubal3	UTSW	13	3,983,137 (GRCm39)	missense	probably damaging	1.00
R1626:Tubal3	UTSW	13	3,982,841 (GRCm39)	missense	probably damaging	1.00
R1657:Tubal3	UTSW	13	3,983,011 (GRCm39)	missense	possibly damaging	0.87
R2084:Tubal3	UTSW	13	3,978,192 (GRCm39)	missense	possibly damaging	0.62
R3545:Tubal3	UTSW	13	3,983,560 (GRCm39)	makesense	probably null
R3976:Tubal3	UTSW	13	3,982,946 (GRCm39)	missense	probably benign
R4700:Tubal3	UTSW	13	3,983,514 (GRCm39)	missense	probably damaging	0.99
R4722:Tubal3	UTSW	13	3,978,185 (GRCm39)	missense	probably damaging	1.00
R5617:Tubal3	UTSW	13	3,983,432 (GRCm39)	missense	probably damaging	1.00
R6474:Tubal3	UTSW	13	3,983,107 (GRCm39)	missense	probably benign	0.10
R7082:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.56
R7273:Tubal3	UTSW	13	3,980,675 (GRCm39)	missense	probably damaging	0.96
R7586:Tubal3	UTSW	13	3,978,198 (GRCm39)	missense	possibly damaging	0.78
R8805:Tubal3	UTSW	13	3,983,293 (GRCm39)	missense	probably damaging	1.00
R8921:Tubal3	UTSW	13	3,983,428 (GRCm39)	missense	probably damaging	1.00
R9043:Tubal3	UTSW	13	3,982,708 (GRCm39)	nonsense	probably null
R9173:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.86
R9487:Tubal3	UTSW	13	3,980,674 (GRCm39)	missense	probably benign	0.03
Z1088:Tubal3	UTSW	13	3,983,511 (GRCm39)	missense	probably benign	0.06

Predicted Primers

PCR Primer
(F):5'- GTTAACTGACTGTAATTCTCACTCC -3'
(R):5'- TCAAAACGCAGTGATGCAGTG -3'

Sequencing Primer
(F):5'- AGGGTCGGGATTTACATC -3'
(R):5'- GCAATCAGCCTGTTGATACTAGC -3'

Posted On

2019-05-13