Mutagenetix > Incidental Mutation

Incidental Mutation 'PIT4378001:Slc22a28'

555039

Institutional Source

Beutler Lab

Gene Symbol

Slc22a28

Ensembl Gene

ENSMUSG00000063590

Gene Name

solute carrier family 22, member 28

Synonyms

Gm5631

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.299) question?

Stock #

PIT4378001 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

8039574-8109346 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to C at 8049279 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Arginine at position 323 (S323R)

Ref Sequence

ENSEMBL: ENSMUSP00000067114 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000065651]

AlphaFold

B2RT89

Predicted Effect

probably damaging
Transcript: ENSMUST00000065651
AA Change: S323R

PolyPhen 2 Score 0.957 (Sensitivity: 0.78; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000067114
Gene: ENSMUSG00000063590
AA Change: S323R

Domain	Start	End	E-Value	Type
transmembrane domain	13	35	N/A	INTRINSIC
Pfam:Sugar_tr	99	527	1.4e-26	PFAM
Pfam:MFS_1	140	375	1.1e-15	PFAM

Coding Region Coverage

1x: 93.1%
3x: 90.8%
10x: 85.0%
20x: 72.2%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 79 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
2310033P09Rik	T	C	11: 59,099,802 (GRCm39)	V100A	probably benign	Het
Adamtsl1	T	C	4: 86,117,601 (GRCm39)	V188A	possibly damaging	Het
Aldh6a1	T	C	12: 84,488,646 (GRCm39)	D80G	probably benign	Het
Ankrd50	T	C	3: 38,509,412 (GRCm39)	Q62R	possibly damaging	Het
Aopep	T	C	13: 63,163,021 (GRCm39)	L14P	probably damaging	Het
Arrdc1	T	A	2: 24,816,645 (GRCm39)	Y177F	probably damaging	Het
Asap1	C	T	15: 64,007,697 (GRCm39)	R384Q	probably damaging	Het
Atxn2l	A	T	7: 126,096,443 (GRCm39)	V433D	probably benign	Het
Bbs1	G	A	19: 4,941,703 (GRCm39)	A529V	probably benign	Het
Bbx	G	A	16: 50,100,836 (GRCm39)	R20*	probably null	Het
Bend5	T	C	4: 111,288,304 (GRCm39)	V106A	probably benign	Het
C1galt1	A	G	6: 7,863,944 (GRCm39)	N8S	probably benign	Het
Cdc42ep1	G	A	15: 78,733,880 (GRCm39)	D327N	possibly damaging	Het
Cep162	A	G	9: 87,099,198 (GRCm39)	S767P	probably benign	Het
Cep43	T	C	17: 8,401,105 (GRCm39)	S209P	probably damaging	Het
Csmd1	T	C	8: 15,945,728 (GRCm39)	T3562A	probably damaging	Het
Dnah7a	A	G	1: 53,570,362 (GRCm39)	S1815P	probably damaging	Het
Ei24	A	T	9: 36,697,320 (GRCm39)	L136Q	probably damaging	Het
Extl2	T	G	3: 115,804,339 (GRCm39)	M1R	probably null	Het
Fat3	T	C	9: 16,288,104 (GRCm39)	E473G	probably benign	Het
Fcgbpl1	G	A	7: 27,853,889 (GRCm39)	D1618N	possibly damaging	Het
Fhip1a	A	G	3: 85,637,858 (GRCm39)	L147P	probably damaging	Het
G6pc3	T	A	11: 102,080,827 (GRCm39)	W26R	probably damaging	Het
Hc	T	A	2: 34,921,876 (GRCm39)	Y610F	probably benign	Het
Hecw1	T	C	13: 14,552,368 (GRCm39)	D77G	probably damaging	Het
Hgf	T	C	5: 16,816,860 (GRCm39)	V497A	probably damaging	Het
Hjurp	CTCTGGGAGGGCTTGCTCCGGGGGCAGTGTGTCCTGTTCTTGTGCAGCCCCT	C	1: 88,193,999 (GRCm39)		probably benign	Het
Hyou1	A	C	9: 44,302,148 (GRCm39)	D968A	probably benign	Het
Jmjd1c	T	A	10: 67,065,692 (GRCm39)	S1525T	probably damaging	Het
Kcnc4	G	A	3: 107,354,879 (GRCm39)	T523I	probably benign	Het
Kcng1	C	T	2: 168,104,604 (GRCm39)	C414Y	probably damaging	Het
Klhdc10	T	C	6: 30,447,411 (GRCm39)	I204T	probably damaging	Het
Krt18	A	T	15: 101,938,358 (GRCm39)	T194S	probably benign	Het
Krt76	A	C	15: 101,800,842 (GRCm39)	N151K	probably damaging	Het
Krtap31-2	A	G	11: 99,827,542 (GRCm39)	T125A	possibly damaging	Het
Lama5	A	G	2: 179,831,238 (GRCm39)	V1807A	possibly damaging	Het
Lats1	T	G	10: 7,581,369 (GRCm39)	V718G	probably damaging	Het
Mef2b	A	G	8: 70,616,910 (GRCm39)	K4E	probably damaging	Het
Mertk	T	C	2: 128,624,537 (GRCm39)		probably null	Het
Mroh8	A	G	2: 157,070,620 (GRCm39)	V577A	possibly damaging	Het
Mtcl1	T	G	17: 66,745,274 (GRCm39)	N381T	probably damaging	Het
Nfyc	T	A	4: 120,647,688 (GRCm39)		probably null	Het
Nol4	C	A	18: 23,172,933 (GRCm39)	W56L	probably damaging	Het
Notch2	A	T	3: 98,050,272 (GRCm39)	D1849V	probably damaging	Het
Or10ad1	G	A	15: 98,105,452 (GRCm39)	T271I	probably damaging	Het
Or10j7	T	C	1: 173,011,381 (GRCm39)	T207A	probably benign	Het
Or14c45	A	T	7: 86,176,306 (GRCm39)	T114S	possibly damaging	Het
Or4n4b	T	C	14: 50,536,355 (GRCm39)	N137S	probably benign	Het
Or5an10	A	G	19: 12,276,076 (GRCm39)	M140T	probably damaging	Het
Or7g28	T	A	9: 19,272,471 (GRCm39)	Y60F	probably damaging	Het
Or8s5	A	G	15: 98,238,153 (GRCm39)	V239A	possibly damaging	Het
Oxr1	G	A	15: 41,664,978 (GRCm39)	V138I	probably benign	Het
Pars2	A	G	4: 106,511,490 (GRCm39)	E424G	possibly damaging	Het
Peli2	C	A	14: 48,405,726 (GRCm39)	Y50*	probably null	Het
Plag1	T	A	4: 3,905,492 (GRCm39)	H66L	probably benign	Het
Psme4	T	C	11: 30,771,079 (GRCm39)		probably benign	Het
Robo1	A	T	16: 72,801,423 (GRCm39)	S1016C	probably damaging	Het
Rrbp1	A	G	2: 143,816,460 (GRCm39)	V723A	probably benign	Het
Sgip1	C	A	4: 102,778,280 (GRCm39)	D292E	unknown	Het
Skint4	T	A	4: 111,944,232 (GRCm39)	C23S	probably benign	Het
Slc41a3	A	G	6: 90,617,891 (GRCm39)	T306A	probably benign	Het
Spata13	A	G	14: 60,987,445 (GRCm39)	M868V	probably damaging	Het
Spata6	T	G	4: 111,603,378 (GRCm39)	I31S	possibly damaging	Het
Sycp3	A	T	10: 88,302,366 (GRCm39)	K119*	probably null	Het
Tlk2	T	A	11: 105,172,046 (GRCm39)	S739T	unknown	Het
Trim10	T	C	17: 37,188,020 (GRCm39)	V412A	probably damaging	Het
Ttc3	T	A	16: 94,211,765 (GRCm39)	F377I	probably benign	Het
Uck1	T	A	2: 32,146,046 (GRCm39)	H283L	probably damaging	Het
Unc5a	T	C	13: 55,143,681 (GRCm39)	Y122H	possibly damaging	Het
Uncx	C	T	5: 139,530,377 (GRCm39)	R152*	probably null	Het
Usp44	A	G	10: 93,681,517 (GRCm39)		probably benign	Het
Vamp2	A	C	11: 68,980,564 (GRCm39)	D44A	probably benign	Het
Vmn2r83	A	G	10: 79,304,849 (GRCm39)	T20A	probably benign	Het
Vmn2r84	A	T	10: 130,221,784 (GRCm39)	I812N	probably damaging	Het
Vrtn	T	G	12: 84,695,943 (GRCm39)	L231R	probably damaging	Het
Wdr75	A	G	1: 45,859,333 (GRCm39)	T677A	probably damaging	Het
Xylt1	C	A	7: 117,148,100 (GRCm39)	S221R	possibly damaging	Het
Zscan22	A	G	7: 12,637,983 (GRCm39)	E125G	possibly damaging	Het
Zxdc	A	T	6: 90,350,698 (GRCm39)	H383L	probably damaging	Het

Other mutations in Slc22a28

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00155:Slc22a28	APN	19	8,107,567 (GRCm39)	missense	possibly damaging	0.89
IGL00515:Slc22a28	APN	19	8,094,428 (GRCm39)	missense	probably benign	0.34
IGL01025:Slc22a28	APN	19	8,094,272 (GRCm39)	splice site	probably benign
IGL02697:Slc22a28	APN	19	8,094,491 (GRCm39)	missense	probably benign	0.06
R0744:Slc22a28	UTSW	19	8,094,197 (GRCm39)	missense	possibly damaging	0.94
R0836:Slc22a28	UTSW	19	8,094,197 (GRCm39)	missense	possibly damaging	0.94
R1398:Slc22a28	UTSW	19	8,107,566 (GRCm39)	nonsense	probably null
R1456:Slc22a28	UTSW	19	8,049,223 (GRCm39)	missense	possibly damaging	0.50
R1603:Slc22a28	UTSW	19	8,040,674 (GRCm39)	missense	probably damaging	1.00
R1993:Slc22a28	UTSW	19	8,094,488 (GRCm39)	missense	possibly damaging	0.79
R2254:Slc22a28	UTSW	19	8,041,858 (GRCm39)	missense	probably benign
R2262:Slc22a28	UTSW	19	8,048,573 (GRCm39)	missense	probably benign	0.00
R4078:Slc22a28	UTSW	19	8,078,777 (GRCm39)	missense	probably benign	0.15
R4165:Slc22a28	UTSW	19	8,040,773 (GRCm39)	missense	possibly damaging	0.95
R4612:Slc22a28	UTSW	19	8,078,770 (GRCm39)	missense	probably damaging	1.00
R4947:Slc22a28	UTSW	19	8,108,816 (GRCm39)	missense	probably benign	0.03
R5573:Slc22a28	UTSW	19	8,048,462 (GRCm39)	missense	possibly damaging	0.50
R5611:Slc22a28	UTSW	19	8,040,698 (GRCm39)	missense	probably damaging	1.00
R5621:Slc22a28	UTSW	19	8,048,376 (GRCm39)	missense	probably benign	0.00
R5671:Slc22a28	UTSW	19	8,108,795 (GRCm39)	missense	probably damaging	1.00
R6063:Slc22a28	UTSW	19	8,094,386 (GRCm39)	missense	probably benign	0.01
R6358:Slc22a28	UTSW	19	8,049,253 (GRCm39)	missense	probably damaging	0.99
R6385:Slc22a28	UTSW	19	8,078,844 (GRCm39)	missense	probably damaging	0.99
R6680:Slc22a28	UTSW	19	8,078,757 (GRCm39)	missense	probably benign	0.07
R6767:Slc22a28	UTSW	19	8,094,409 (GRCm39)	missense	probably damaging	1.00
R6865:Slc22a28	UTSW	19	8,041,856 (GRCm39)	nonsense	probably null
R6947:Slc22a28	UTSW	19	8,041,875 (GRCm39)	missense	possibly damaging	0.58
R7049:Slc22a28	UTSW	19	8,049,270 (GRCm39)	missense	probably benign
R7269:Slc22a28	UTSW	19	8,094,491 (GRCm39)	missense	probably benign	0.06
R7484:Slc22a28	UTSW	19	8,048,492 (GRCm39)	missense	probably benign
R7823:Slc22a28	UTSW	19	8,041,890 (GRCm39)	missense	probably benign	0.38
R7856:Slc22a28	UTSW	19	8,040,698 (GRCm39)	missense	probably damaging	1.00
R7980:Slc22a28	UTSW	19	8,078,837 (GRCm39)	missense	probably damaging	0.99
R8323:Slc22a28	UTSW	19	8,108,788 (GRCm39)	missense	probably damaging	1.00
R8404:Slc22a28	UTSW	19	8,108,793 (GRCm39)	nonsense	probably null
R8435:Slc22a28	UTSW	19	8,048,565 (GRCm39)	missense	probably benign	0.13
R8529:Slc22a28	UTSW	19	8,040,778 (GRCm39)	missense	probably benign	0.01
R9149:Slc22a28	UTSW	19	8,049,205 (GRCm39)	missense	probably benign	0.00
R9727:Slc22a28	UTSW	19	8,108,818 (GRCm39)	missense	probably benign
R9782:Slc22a28	UTSW	19	8,041,813 (GRCm39)	missense	probably null	1.00
Z1088:Slc22a28	UTSW	19	8,039,763 (GRCm39)	missense	probably damaging	0.96
Z1176:Slc22a28	UTSW	19	8,039,748 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- GAGCCTGGCATGAAGTTTGG -3'
(R):5'- ACTTCACTGTAGAAATCCCCTGAG -3'

Sequencing Primer
(F):5'- GGCATGAAGTTTGGATGTACACACTC -3'
(R):5'- GAAATCCCCTGAGTATTTTTGTCTTG -3'

Posted On

2019-06-07