Incidental Mutation 'R5131:Cyp4a12a'
| ID |
394995 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Cyp4a12a
|
| Ensembl Gene |
ENSMUSG00000066071 |
| Gene Name |
cytochrome P450, family 4, subfamily a, polypeptide 12a |
| Synonyms |
Cyp4a12 |
| MMRRC Submission |
042719-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.083)
|
| Stock # |
R5131 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
4 |
| Chromosomal Location |
115156243-115190012 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to A
at 115185017 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Aspartic acid to Glutamic Acid
at position 399
(D399E)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000081370
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000084343]
|
| AlphaFold |
Q91WL5 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000084343
AA Change: D399E
PolyPhen 2
Score 0.599 (Sensitivity: 0.87; Specificity: 0.91)
|
| SMART Domains |
Protein: ENSMUSP00000081370
Gene: ENSMUSG00000066071
AA Change: D399E
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
18 |
39 |
N/A |
INTRINSIC |
|
Pfam:p450
|
51 |
503 |
1e-131 |
PFAM |
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.5%
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 41 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aco1 |
C |
T |
4: 40,163,797 (GRCm39) |
P17S |
probably benign |
Het |
| Arhgap35 |
A |
G |
7: 16,245,112 (GRCm39) |
|
probably null |
Het |
| Brd3 |
A |
T |
2: 27,343,427 (GRCm39) |
N480K |
probably benign |
Het |
| Ccnk |
T |
C |
12: 108,168,890 (GRCm39) |
|
probably benign |
Het |
| Cdc23 |
C |
A |
18: 34,784,742 (GRCm39) |
V7L |
unknown |
Het |
| Cdh1 |
T |
C |
8: 107,390,430 (GRCm39) |
V590A |
possibly damaging |
Het |
| Cert1 |
A |
G |
13: 96,751,343 (GRCm39) |
D331G |
probably damaging |
Het |
| Cic |
TCCCCC |
TCCCCCCCC |
7: 24,991,095 (GRCm39) |
|
probably benign |
Het |
| Cmklr2 |
T |
A |
1: 63,222,840 (GRCm39) |
S132C |
probably damaging |
Het |
| Dnah11 |
A |
C |
12: 117,918,486 (GRCm39) |
Y3482D |
probably damaging |
Het |
| Gtf3c3 |
A |
T |
1: 54,458,657 (GRCm39) |
|
probably null |
Het |
| Gzmk |
G |
T |
13: 113,310,482 (GRCm39) |
A73E |
probably benign |
Het |
| Hnrnpul1 |
A |
G |
7: 25,426,219 (GRCm39) |
V444A |
probably benign |
Het |
| Lgr4 |
T |
C |
2: 109,842,678 (GRCm39) |
S864P |
probably benign |
Het |
| Lrp2 |
A |
T |
2: 69,260,686 (GRCm39) |
V4515E |
possibly damaging |
Het |
| Map3k19 |
A |
T |
1: 127,751,427 (GRCm39) |
N641K |
possibly damaging |
Het |
| Mesp2 |
A |
G |
7: 79,461,475 (GRCm39) |
T267A |
possibly damaging |
Het |
| Mipep |
T |
C |
14: 61,140,823 (GRCm39) |
L682P |
probably damaging |
Het |
| Nalcn |
G |
T |
14: 123,753,182 (GRCm39) |
T268K |
probably damaging |
Het |
| Ncam2 |
T |
C |
16: 81,234,550 (GRCm39) |
V135A |
probably benign |
Het |
| Ndufaf6 |
G |
T |
4: 11,060,931 (GRCm39) |
T215K |
probably damaging |
Het |
| Nr1h4 |
T |
C |
10: 89,319,317 (GRCm39) |
D183G |
probably damaging |
Het |
| Pate9 |
C |
T |
9: 36,446,242 (GRCm39) |
A57T |
possibly damaging |
Het |
| Pax2 |
G |
T |
19: 44,749,394 (GRCm39) |
V41L |
probably damaging |
Het |
| Pde4dip |
T |
A |
3: 97,616,830 (GRCm39) |
N1804I |
probably damaging |
Het |
| Phtf2 |
A |
T |
5: 20,979,050 (GRCm39) |
V526E |
probably damaging |
Het |
| Ppp1ca |
G |
A |
19: 4,244,895 (GRCm39) |
C291Y |
probably damaging |
Het |
| Prag1 |
G |
T |
8: 36,607,123 (GRCm39) |
G955C |
probably damaging |
Het |
| Psap |
T |
A |
10: 60,135,736 (GRCm39) |
V394E |
possibly damaging |
Het |
| Rap1b |
C |
T |
10: 117,660,516 (GRCm39) |
V14I |
probably damaging |
Het |
| Rnf181 |
G |
A |
6: 72,337,811 (GRCm39) |
|
probably null |
Het |
| Rsbn1l |
G |
A |
5: 21,101,243 (GRCm39) |
R766C |
possibly damaging |
Het |
| Rusc2 |
C |
T |
4: 43,414,948 (GRCm39) |
P85S |
probably benign |
Het |
| Rxfp1 |
T |
C |
3: 79,559,471 (GRCm39) |
|
probably null |
Het |
| Serpinb6a |
T |
A |
13: 34,102,855 (GRCm39) |
M202L |
probably benign |
Het |
| Snd1 |
T |
C |
6: 28,885,049 (GRCm39) |
F800S |
probably damaging |
Het |
| Tbc1d2b |
G |
A |
9: 90,091,812 (GRCm39) |
T830I |
probably damaging |
Het |
| Tmem209 |
A |
T |
6: 30,497,166 (GRCm39) |
N183K |
probably benign |
Het |
| Tmtc3 |
T |
C |
10: 100,284,841 (GRCm39) |
D598G |
probably damaging |
Het |
| Ube3b |
A |
G |
5: 114,545,607 (GRCm39) |
D622G |
probably damaging |
Het |
| Zbtb43 |
A |
T |
2: 33,344,778 (GRCm39) |
M112K |
probably damaging |
Het |
|
| Other mutations in Cyp4a12a |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00931:Cyp4a12a
|
APN |
4 |
115,159,153 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
IGL00948:Cyp4a12a
|
APN |
4 |
115,159,159 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL03143:Cyp4a12a
|
APN |
4 |
115,159,200 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0099:Cyp4a12a
|
UTSW |
4 |
115,183,869 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0371:Cyp4a12a
|
UTSW |
4 |
115,183,880 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R1893:Cyp4a12a
|
UTSW |
4 |
115,183,864 (GRCm39) |
missense |
probably benign |
0.03 |
|
R2018:Cyp4a12a
|
UTSW |
4 |
115,184,702 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3423:Cyp4a12a
|
UTSW |
4 |
115,184,471 (GRCm39) |
missense |
probably benign |
0.37 |
|
R4445:Cyp4a12a
|
UTSW |
4 |
115,183,980 (GRCm39) |
critical splice donor site |
probably null |
|
|
R4586:Cyp4a12a
|
UTSW |
4 |
115,184,509 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4765:Cyp4a12a
|
UTSW |
4 |
115,183,388 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4823:Cyp4a12a
|
UTSW |
4 |
115,184,610 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R5841:Cyp4a12a
|
UTSW |
4 |
115,183,899 (GRCm39) |
missense |
probably benign |
0.03 |
|
R6017:Cyp4a12a
|
UTSW |
4 |
115,183,476 (GRCm39) |
nonsense |
probably null |
|
|
R6039:Cyp4a12a
|
UTSW |
4 |
115,184,420 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6039:Cyp4a12a
|
UTSW |
4 |
115,184,420 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6170:Cyp4a12a
|
UTSW |
4 |
115,184,643 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R6883:Cyp4a12a
|
UTSW |
4 |
115,159,221 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7308:Cyp4a12a
|
UTSW |
4 |
115,184,955 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R7327:Cyp4a12a
|
UTSW |
4 |
115,184,756 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7452:Cyp4a12a
|
UTSW |
4 |
115,184,795 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7595:Cyp4a12a
|
UTSW |
4 |
115,189,089 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7638:Cyp4a12a
|
UTSW |
4 |
115,184,670 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R8040:Cyp4a12a
|
UTSW |
4 |
115,183,412 (GRCm39) |
missense |
probably benign |
0.12 |
|
R8303:Cyp4a12a
|
UTSW |
4 |
115,186,130 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8491:Cyp4a12a
|
UTSW |
4 |
115,158,650 (GRCm39) |
splice site |
probably null |
|
|
R8954:Cyp4a12a
|
UTSW |
4 |
115,185,935 (GRCm39) |
nonsense |
probably null |
|
|
R9031:Cyp4a12a
|
UTSW |
4 |
115,189,199 (GRCm39) |
makesense |
probably null |
|
|
R9356:Cyp4a12a
|
UTSW |
4 |
115,185,915 (GRCm39) |
missense |
probably benign |
|
|
R9674:Cyp4a12a
|
UTSW |
4 |
115,186,156 (GRCm39) |
missense |
probably benign |
0.00 |
|
X0024:Cyp4a12a
|
UTSW |
4 |
115,185,009 (GRCm39) |
missense |
probably benign |
0.39 |
|
Z1176:Cyp4a12a
|
UTSW |
4 |
115,186,200 (GRCm39) |
critical splice donor site |
probably null |
|
|
| Predicted Primers |
PCR Primer
(F):5'- GCTCAAGATGGATGAGATTTCTG -3'
(R):5'- AGTGTAACTGTATGCAAAGCACTTC -3'
Sequencing Primer
(F):5'- TCTTTTGCTAATGGGAAGCTCC -3'
(R):5'- TGTATGCAAAGCACTTCATACAC -3'
|
| Posted On |
2016-06-21 |
Incidental Mutation