Incidental Mutation 'R9316:Pate3'
ID 705883
Institutional Source Beutler Lab
Gene Symbol Pate3
Ensembl Gene ENSMUSG00000094995
Gene Name prostate and testis expressed 3
Synonyms Gm17365
MMRRC Submission
Accession Numbers
Essential gene? Probably non essential (E-score: 0.058) question?
Stock # R9316 (G1)
Quality Score 225.009
Status Validated
Chromosome 9
Chromosomal Location 35556409-35559498 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 35557374 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Cysteine to Tyrosine at position 94 (C94Y)
Ref Sequence ENSEMBL: ENSMUSP00000136668 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000098906] [ENSMUST00000178236]
AlphaFold B3GLJ3
Predicted Effect probably benign
Transcript: ENSMUST00000098906
SMART Domains Protein: ENSMUSP00000096505
Gene: ENSMUSG00000074452

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Predicted Effect probably damaging
Transcript: ENSMUST00000178236
AA Change: C94Y

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000136668
Gene: ENSMUSG00000094995
AA Change: C94Y

DomainStartEndE-ValueType
signal peptide 1 18 N/A INTRINSIC
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.6%
  • 20x: 98.7%
Validation Efficiency 91% (32/35)
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Actr5 C A 2: 158,477,274 (GRCm39) N408K probably benign Het
AI661453 A G 17: 47,747,832 (GRCm39) I35V probably benign Het
Asb10 G T 5: 24,745,045 (GRCm39) N101K possibly damaging Het
Bpifa6 T C 2: 153,828,383 (GRCm39) V163A possibly damaging Het
Dmp1 G T 5: 104,357,767 (GRCm39) D36Y probably benign Het
Eef1d T A 15: 75,781,130 (GRCm39) probably benign Het
Gcm2 C T 13: 41,259,328 (GRCm39) R47H probably damaging Het
Gm7145 A G 1: 117,896,174 (GRCm39) N72S probably benign Het
Gpr45 T A 1: 43,071,534 (GRCm39) V59E probably damaging Het
Gucy1a1 T C 3: 82,016,250 (GRCm39) E246G possibly damaging Het
Hspa12a C T 19: 58,793,079 (GRCm39) E369K probably benign Het
Iho1 T C 9: 108,298,726 (GRCm39) T31A possibly damaging Het
Il6st T A 13: 112,639,349 (GRCm39) N652K possibly damaging Het
Kdm5a T A 6: 120,381,973 (GRCm39) D672E probably damaging Het
Klk6 T C 7: 43,477,912 (GRCm39) S95P probably benign Het
Lrrc51 C T 7: 101,562,351 (GRCm39) R169H probably damaging Het
Or14c41 T C 7: 86,235,134 (GRCm39) V217A probably benign Het
Or3a4 A T 11: 73,944,892 (GRCm39) I231N probably damaging Het
Pacsin1 A G 17: 27,924,707 (GRCm39) K186E possibly damaging Het
Pcdh18 G A 3: 49,709,089 (GRCm39) T742M probably damaging Het
Pogz T A 3: 94,784,659 (GRCm39) S779T probably damaging Het
Prep A T 10: 44,967,192 (GRCm39) K75M probably damaging Het
Qsox2 T G 2: 26,101,084 (GRCm39) K475T probably benign Het
Qsox2 T A 2: 26,101,085 (GRCm39) K475* probably null Het
Rfng A T 11: 120,674,863 (GRCm39) D42E unknown Het
Ripor2 C T 13: 24,905,719 (GRCm39) T955M probably benign Het
Ryr1 C T 7: 28,717,387 (GRCm39) E4554K unknown Het
Slco1a5 A T 6: 142,195,935 (GRCm39) L356H probably damaging Het
Tbc1d21 G A 9: 58,274,215 (GRCm39) A30V probably benign Het
Tmem161b C A 13: 84,430,855 (GRCm39) H158N possibly damaging Het
Tmem217 A G 17: 29,745,383 (GRCm39) F116L probably benign Het
Tnfrsf13c A G 15: 82,108,021 (GRCm39) I119T probably benign Het
Tpp2 G A 1: 44,017,604 (GRCm39) R736H probably damaging Het
Vmn2r75 T A 7: 85,797,313 (GRCm39) R833S possibly damaging Het
Zfp330 A G 8: 83,491,487 (GRCm39) S229P probably damaging Het
Other mutations in Pate3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02079:Pate3 APN 9 35,557,449 (GRCm39) missense probably damaging 1.00
IGL03230:Pate3 APN 9 35,557,402 (GRCm39) missense probably benign 0.03
R0131:Pate3 UTSW 9 35,557,453 (GRCm39) missense probably damaging 1.00
R1777:Pate3 UTSW 9 35,559,412 (GRCm39) missense probably benign 0.01
R1822:Pate3 UTSW 9 35,557,401 (GRCm39) missense probably benign
R2862:Pate3 UTSW 9 35,559,415 (GRCm39) start codon destroyed possibly damaging 0.96
R4006:Pate3 UTSW 9 35,557,398 (GRCm39) missense probably damaging 0.99
R4629:Pate3 UTSW 9 35,557,453 (GRCm39) missense probably damaging 1.00
R6894:Pate3 UTSW 9 35,557,969 (GRCm39) missense probably damaging 1.00
R9075:Pate3 UTSW 9 35,557,893 (GRCm39) critical splice donor site probably null
Predicted Primers PCR Primer
(F):5'- AGATGCCAATTCTAGTACTAGGAG -3'
(R):5'- AAGGCAATGAGTGGTCTGCC -3'

Sequencing Primer
(F):5'- GTTTAAAACCATCATTGCCTGC -3'
(R):5'- TCTGCCTTGGAGACTGAGATCAC -3'
Posted On 2022-03-25