Incidental Mutation 'R6599:Vmn1r87'
ID |
525115 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r87
|
Ensembl Gene |
ENSMUSG00000070815 |
Gene Name |
vomeronasal 1 receptor 87 |
Synonyms |
V1rk1 |
MMRRC Submission |
044723-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.050)
|
Stock # |
R6599 (G1)
|
Quality Score |
225.009 |
Status
|
Validated
|
Chromosome |
7 |
Chromosomal Location |
12865398-12866285 bp(-) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 12865886 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Lysine to Stop codon
at position 134
(K134*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000154184
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000094827]
[ENSMUST00000211249]
[ENSMUST00000227443]
[ENSMUST00000228800]
|
AlphaFold |
Q8R255 |
Predicted Effect |
probably null
Transcript: ENSMUST00000094827
AA Change: K134*
|
SMART Domains |
Protein: ENSMUSP00000092422 Gene: ENSMUSG00000070815 AA Change: K134*
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
1 |
285 |
1.2e-11 |
PFAM |
Pfam:V1R
|
14 |
280 |
1.8e-36 |
PFAM |
|
Predicted Effect |
probably null
Transcript: ENSMUST00000211249
AA Change: K134*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000227443
AA Change: K134*
|
Predicted Effect |
probably null
Transcript: ENSMUST00000228800
AA Change: K134*
|
Meta Mutation Damage Score |
0.9755 |
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.6%
- 20x: 95.9%
|
Validation Efficiency |
94% (32/34) |
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
4930579F01Rik |
T |
C |
3: 137,882,250 (GRCm39) |
H150R |
probably benign |
Het |
Acbd5 |
C |
T |
2: 22,959,092 (GRCm39) |
|
probably benign |
Het |
Adcyap1r1 |
G |
A |
6: 55,456,979 (GRCm39) |
V237M |
probably damaging |
Het |
Akr1c6 |
T |
G |
13: 4,499,318 (GRCm39) |
|
probably null |
Het |
Ccdc7b |
T |
A |
8: 129,893,462 (GRCm39) |
F96L |
probably benign |
Het |
Cubn |
T |
C |
2: 13,315,484 (GRCm39) |
H2983R |
possibly damaging |
Het |
Dhx40 |
T |
A |
11: 86,695,175 (GRCm39) |
I112L |
possibly damaging |
Het |
Dnmbp |
A |
T |
19: 43,845,025 (GRCm39) |
D1070E |
probably damaging |
Het |
Eml2 |
G |
A |
7: 18,935,088 (GRCm39) |
V432I |
probably damaging |
Het |
Ep300 |
G |
C |
15: 81,470,914 (GRCm39) |
D29H |
unknown |
Het |
Exoc3 |
T |
C |
13: 74,337,277 (GRCm39) |
|
probably null |
Het |
Fcsk |
A |
T |
8: 111,619,915 (GRCm39) |
|
probably null |
Het |
Gm6401 |
C |
A |
14: 41,788,821 (GRCm39) |
E83* |
probably null |
Het |
Gm8267 |
G |
T |
14: 44,955,367 (GRCm39) |
T218K |
possibly damaging |
Het |
H1f3 |
T |
C |
13: 23,739,451 (GRCm39) |
|
probably null |
Het |
Hif3a |
T |
A |
7: 16,776,530 (GRCm39) |
D470V |
possibly damaging |
Het |
Igf2r |
T |
C |
17: 12,917,505 (GRCm39) |
S1526G |
possibly damaging |
Het |
Lrp2 |
T |
C |
2: 69,299,749 (GRCm39) |
D3101G |
probably damaging |
Het |
Megf6 |
A |
G |
4: 154,342,544 (GRCm39) |
|
probably null |
Het |
Mthfs |
G |
A |
9: 89,121,961 (GRCm39) |
G149D |
probably damaging |
Het |
Nnmt |
T |
C |
9: 48,514,669 (GRCm39) |
D116G |
probably benign |
Het |
Nqo2 |
T |
C |
13: 34,163,539 (GRCm39) |
F22S |
probably damaging |
Het |
Or1e29 |
T |
A |
11: 73,667,506 (GRCm39) |
M216L |
probably benign |
Het |
Or7e175 |
T |
C |
9: 20,049,239 (GRCm39) |
S276P |
probably damaging |
Het |
Parm1 |
T |
C |
5: 91,741,718 (GRCm39) |
S29P |
possibly damaging |
Het |
Prokr2 |
C |
T |
2: 132,215,469 (GRCm39) |
V331M |
possibly damaging |
Het |
Ptch1 |
T |
A |
13: 63,670,918 (GRCm39) |
I871F |
probably damaging |
Het |
Rps6ka5 |
C |
A |
12: 100,564,168 (GRCm39) |
G227V |
probably damaging |
Het |
Tcaim |
C |
T |
9: 122,663,844 (GRCm39) |
Q445* |
probably null |
Het |
Trappc14 |
G |
T |
5: 138,261,720 (GRCm39) |
|
probably null |
Het |
Trpc7 |
T |
C |
13: 56,958,193 (GRCm39) |
|
probably null |
Het |
Ubxn7 |
A |
G |
16: 32,203,743 (GRCm39) |
E465G |
probably damaging |
Het |
Unk |
G |
A |
11: 115,938,628 (GRCm39) |
R77Q |
probably damaging |
Het |
Vmn1r226 |
A |
T |
17: 20,908,551 (GRCm39) |
N261I |
probably benign |
Het |
Vmn2r10 |
T |
A |
5: 109,143,944 (GRCm39) |
I669L |
probably benign |
Het |
Vmn2r115 |
A |
G |
17: 23,565,006 (GRCm39) |
I298V |
probably benign |
Het |
Yipf2 |
T |
C |
9: 21,501,144 (GRCm39) |
K85E |
probably damaging |
Het |
Zfp979 |
A |
T |
4: 147,698,083 (GRCm39) |
C209S |
probably benign |
Het |
|
Other mutations in Vmn1r87 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01400:Vmn1r87
|
APN |
7 |
12,866,230 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01577:Vmn1r87
|
APN |
7 |
12,865,775 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02972:Vmn1r87
|
APN |
7 |
12,866,256 (GRCm39) |
nonsense |
probably null |
|
IGL03246:Vmn1r87
|
APN |
7 |
12,866,288 (GRCm39) |
utr 5 prime |
probably benign |
|
PIT4142001:Vmn1r87
|
UTSW |
7 |
12,866,112 (GRCm39) |
missense |
probably benign |
0.00 |
R0153:Vmn1r87
|
UTSW |
7 |
12,866,211 (GRCm39) |
missense |
probably damaging |
1.00 |
R0502:Vmn1r87
|
UTSW |
7 |
12,865,583 (GRCm39) |
missense |
probably damaging |
1.00 |
R0658:Vmn1r87
|
UTSW |
7 |
12,865,756 (GRCm39) |
missense |
probably damaging |
1.00 |
R1589:Vmn1r87
|
UTSW |
7 |
12,865,703 (GRCm39) |
missense |
possibly damaging |
0.46 |
R1731:Vmn1r87
|
UTSW |
7 |
12,865,703 (GRCm39) |
missense |
possibly damaging |
0.46 |
R2027:Vmn1r87
|
UTSW |
7 |
12,865,823 (GRCm39) |
missense |
probably damaging |
0.99 |
R2044:Vmn1r87
|
UTSW |
7 |
12,865,748 (GRCm39) |
missense |
probably benign |
0.02 |
R3124:Vmn1r87
|
UTSW |
7 |
12,865,493 (GRCm39) |
missense |
probably damaging |
1.00 |
R4208:Vmn1r87
|
UTSW |
7 |
12,866,185 (GRCm39) |
missense |
probably benign |
0.37 |
R4731:Vmn1r87
|
UTSW |
7 |
12,866,254 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4732:Vmn1r87
|
UTSW |
7 |
12,866,254 (GRCm39) |
missense |
possibly damaging |
0.92 |
R4733:Vmn1r87
|
UTSW |
7 |
12,866,254 (GRCm39) |
missense |
possibly damaging |
0.92 |
R5079:Vmn1r87
|
UTSW |
7 |
12,866,253 (GRCm39) |
missense |
probably benign |
0.01 |
R5125:Vmn1r87
|
UTSW |
7 |
12,865,792 (GRCm39) |
missense |
possibly damaging |
0.79 |
R5178:Vmn1r87
|
UTSW |
7 |
12,865,792 (GRCm39) |
missense |
possibly damaging |
0.79 |
R7067:Vmn1r87
|
UTSW |
7 |
12,865,849 (GRCm39) |
missense |
probably benign |
0.02 |
R7560:Vmn1r87
|
UTSW |
7 |
12,865,745 (GRCm39) |
missense |
probably damaging |
1.00 |
R7574:Vmn1r87
|
UTSW |
7 |
12,865,613 (GRCm39) |
missense |
probably benign |
0.01 |
R7910:Vmn1r87
|
UTSW |
7 |
12,865,832 (GRCm39) |
missense |
probably damaging |
1.00 |
R8040:Vmn1r87
|
UTSW |
7 |
12,866,086 (GRCm39) |
missense |
possibly damaging |
0.87 |
R8220:Vmn1r87
|
UTSW |
7 |
12,865,427 (GRCm39) |
missense |
possibly damaging |
0.72 |
R9690:Vmn1r87
|
UTSW |
7 |
12,866,263 (GRCm39) |
missense |
probably benign |
0.01 |
X0028:Vmn1r87
|
UTSW |
7 |
12,865,910 (GRCm39) |
missense |
possibly damaging |
0.52 |
|
Predicted Primers |
PCR Primer
(F):5'- AAACTGTGGACATGCCGTGTAC -3'
(R):5'- GCATACAGTGTTACTAGGGGCC -3'
Sequencing Primer
(F):5'- GGACATGCCGTGTACTCCTATTG -3'
(R):5'- ATACAGTGTTACTAGGGGCCTTTCC -3'
|
Posted On |
2018-06-22 |