Mutagenetix > Incidental Mutation

Incidental Mutation 'R6760:Vmn2r118'

531205

Institutional Source

Beutler Lab

Gene Symbol

Vmn2r118

Ensembl Gene

ENSMUSG00000091504

Gene Name

vomeronasal 2, receptor 118

Synonyms

Vmn2r119, EG668547, EG383258

MMRRC Submission

044876-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.128) question?

Stock #

R6760 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

55899341-55931672 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 55899714 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 730 (H730L)

Ref Sequence

ENSEMBL: ENSMUSP00000131128 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000168440]

AlphaFold

E9Q1C1

Predicted Effect

possibly damaging
Transcript: ENSMUST00000168440
AA Change: H730L

PolyPhen 2 Score 0.915 (Sensitivity: 0.81; Specificity: 0.94)

SMART Domains

Protein: ENSMUSP00000131128
Gene: ENSMUSG00000091504
AA Change: H730L

Domain	Start	End	E-Value	Type
signal peptide	1	22	N/A	INTRINSIC
Pfam:ANF_receptor	142	470	4.6e-27	PFAM
Pfam:NCD3G	513	566	2.6e-20	PFAM
Pfam:7tm_3	599	834	5.9e-55	PFAM

Meta Mutation Damage Score

0.1795

Coding Region Coverage

1x: 99.9%
3x: 99.5%
10x: 97.6%
20x: 92.8%

Validation Efficiency

97% (35/36)

Allele List at MGI

Other mutations in this stock

Total: 33 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aco1	C	A	4: 40,180,210 (GRCm39)	C370*	probably null	Het
Akap6	C	T	12: 53,186,561 (GRCm39)	S1325L	probably damaging	Het
Atp2a3	A	G	11: 72,873,566 (GRCm39)	D813G	probably damaging	Het
Baz2b	T	A	2: 59,792,776 (GRCm39)	I451F	probably benign	Het
Calm2	T	C	17: 87,743,123 (GRCm39)	D65G	probably benign	Het
Cdh23	C	T	10: 60,141,947 (GRCm39)	V3049M	probably damaging	Het
Cfap46	A	G	7: 139,232,356 (GRCm39)	L869P	probably damaging	Het
Chrna9	T	A	5: 66,128,571 (GRCm39)	Y260N	probably damaging	Het
Clock	G	A	5: 76,374,823 (GRCm39)	P782L	unknown	Het
Coro2a	A	G	4: 46,540,572 (GRCm39)	M449T	probably benign	Het
Crispld1	T	G	1: 17,821,025 (GRCm39)	V355G	possibly damaging	Het
Dnah7c	C	A	1: 46,688,500 (GRCm39)	T1890K	probably benign	Het
Dnah7c	A	G	1: 46,688,511 (GRCm39)	S1894G	probably benign	Het
Enpp5	G	A	17: 44,396,155 (GRCm39)	G356S	probably damaging	Het
Gpr37	T	C	6: 25,669,168 (GRCm39)	I559V	probably benign	Het
Grik5	A	G	7: 24,758,364 (GRCm39)		probably null	Het
Itga8	T	C	2: 12,306,451 (GRCm39)	Y48C	probably damaging	Het
Manba	T	C	3: 135,248,212 (GRCm39)	V367A	probably damaging	Het
Mrgpra1	G	A	7: 46,984,789 (GRCm39)	R297W	probably benign	Het
Myh7b	C	A	2: 155,462,038 (GRCm39)	Y311*	probably null	Het
Nmd3	T	A	3: 69,654,170 (GRCm39)		probably null	Het
Or5m9	T	A	2: 85,877,358 (GRCm39)	C177*	probably null	Het
Pakap	T	C	4: 57,856,026 (GRCm39)	W493R	probably damaging	Het
Pcdhb11	A	T	18: 37,554,637 (GRCm39)		probably benign	Het
Plcb1	C	T	2: 135,313,980 (GRCm39)	T1144M	possibly damaging	Het
Sfrp1	A	G	8: 23,901,904 (GRCm39)	D35G	probably damaging	Het
St3gal1	A	G	15: 66,983,195 (GRCm39)	V187A	possibly damaging	Het
Timeless	A	G	10: 128,081,986 (GRCm39)	K537R	probably benign	Het
Tnrc6a	T	A	7: 122,771,222 (GRCm39)	V1004E	probably damaging	Het
Tubb4a	T	C	17: 57,387,796 (GRCm39)	E410G	possibly damaging	Het
U2surp	G	A	9: 95,375,764 (GRCm39)	A143V	probably benign	Het
Vmn2r28	G	A	7: 5,484,229 (GRCm39)	T657I	probably damaging	Het
Ybey	A	T	10: 76,304,033 (GRCm39)	N56K	probably benign	Het

Other mutations in Vmn2r118

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00091:Vmn2r118	APN	17	55,899,708 (GRCm39)	missense	probably damaging	1.00
IGL00976:Vmn2r118	APN	17	55,900,204 (GRCm39)	missense	probably damaging	1.00
IGL01419:Vmn2r118	APN	17	55,900,000 (GRCm39)	missense	probably benign	0.01
IGL01796:Vmn2r118	APN	17	55,915,585 (GRCm39)	missense	probably benign	0.30
IGL01799:Vmn2r118	APN	17	55,899,990 (GRCm39)	missense	probably damaging	1.00
IGL02002:Vmn2r118	APN	17	55,899,619 (GRCm39)	missense	probably damaging	1.00
IGL02075:Vmn2r118	APN	17	55,917,517 (GRCm39)	missense	probably benign	0.18
IGL02172:Vmn2r118	APN	17	55,931,598 (GRCm39)	missense	probably benign	0.00
IGL02529:Vmn2r118	APN	17	55,917,870 (GRCm39)	missense	possibly damaging	0.58
IGL02712:Vmn2r118	APN	17	55,899,655 (GRCm39)	missense	probably benign	0.21
IGL03096:Vmn2r118	APN	17	55,914,996 (GRCm39)	missense	probably damaging	1.00
R0306:Vmn2r118	UTSW	17	55,915,616 (GRCm39)	missense	possibly damaging	0.89
R0329:Vmn2r118	UTSW	17	55,917,717 (GRCm39)	missense	probably damaging	1.00
R0330:Vmn2r118	UTSW	17	55,917,717 (GRCm39)	missense	probably damaging	1.00
R0396:Vmn2r118	UTSW	17	55,915,643 (GRCm39)	missense	probably benign	0.00
R0411:Vmn2r118	UTSW	17	55,918,021 (GRCm39)	splice site	probably benign
R0513:Vmn2r118	UTSW	17	55,917,970 (GRCm39)	nonsense	probably null
R0627:Vmn2r118	UTSW	17	55,917,772 (GRCm39)	missense	probably benign	0.01
R0638:Vmn2r118	UTSW	17	55,915,466 (GRCm39)	missense	probably benign	0.03
R1328:Vmn2r118	UTSW	17	55,915,620 (GRCm39)	missense	probably benign	0.01
R1366:Vmn2r118	UTSW	17	55,900,237 (GRCm39)	nonsense	probably null
R1465:Vmn2r118	UTSW	17	55,917,935 (GRCm39)	missense	probably benign	0.33
R1465:Vmn2r118	UTSW	17	55,917,935 (GRCm39)	missense	probably benign	0.33
R1511:Vmn2r118	UTSW	17	55,915,496 (GRCm39)	nonsense	probably null
R1515:Vmn2r118	UTSW	17	55,917,643 (GRCm39)	missense	probably benign	0.25
R1550:Vmn2r118	UTSW	17	55,915,083 (GRCm39)	missense	probably damaging	1.00
R1779:Vmn2r118	UTSW	17	55,918,530 (GRCm39)	missense	probably benign	0.03
R1834:Vmn2r118	UTSW	17	55,899,456 (GRCm39)	missense	probably damaging	1.00
R1840:Vmn2r118	UTSW	17	55,917,406 (GRCm39)	nonsense	probably null
R1854:Vmn2r118	UTSW	17	55,918,556 (GRCm39)	missense	possibly damaging	0.57
R1967:Vmn2r118	UTSW	17	55,899,882 (GRCm39)	missense	probably damaging	1.00
R1976:Vmn2r118	UTSW	17	55,899,925 (GRCm39)	missense	probably damaging	1.00
R2308:Vmn2r118	UTSW	17	55,931,650 (GRCm39)	missense	probably benign	0.33
R3700:Vmn2r118	UTSW	17	55,915,421 (GRCm39)	missense	possibly damaging	0.68
R4334:Vmn2r118	UTSW	17	55,917,347 (GRCm39)	missense	possibly damaging	0.58
R4647:Vmn2r118	UTSW	17	55,917,665 (GRCm39)	missense	probably damaging	1.00
R4709:Vmn2r118	UTSW	17	55,917,860 (GRCm39)	missense	probably damaging	1.00
R4805:Vmn2r118	UTSW	17	55,899,581 (GRCm39)	missense	probably damaging	1.00
R4858:Vmn2r118	UTSW	17	55,899,894 (GRCm39)	missense	probably damaging	0.98
R5384:Vmn2r118	UTSW	17	55,918,565 (GRCm39)	missense	probably benign	0.00
R5385:Vmn2r118	UTSW	17	55,918,565 (GRCm39)	missense	probably benign	0.00
R5664:Vmn2r118	UTSW	17	55,899,765 (GRCm39)	missense	possibly damaging	0.46
R5740:Vmn2r118	UTSW	17	55,900,103 (GRCm39)	missense	probably benign	0.00
R5927:Vmn2r118	UTSW	17	55,931,494 (GRCm39)	missense	probably benign	0.04
R6143:Vmn2r118	UTSW	17	55,899,871 (GRCm39)	missense	possibly damaging	0.92
R6513:Vmn2r118	UTSW	17	55,915,093 (GRCm39)	missense	probably damaging	1.00
R6573:Vmn2r118	UTSW	17	55,899,996 (GRCm39)	missense	probably damaging	1.00
R6794:Vmn2r118	UTSW	17	55,899,348 (GRCm39)	missense	possibly damaging	0.48
R6929:Vmn2r118	UTSW	17	55,917,440 (GRCm39)	missense	probably benign	0.01
R7201:Vmn2r118	UTSW	17	55,915,496 (GRCm39)	nonsense	probably null
R7539:Vmn2r118	UTSW	17	55,899,853 (GRCm39)	missense	probably damaging	0.98
R7836:Vmn2r118	UTSW	17	55,900,242 (GRCm39)	missense	probably damaging	0.99
R8179:Vmn2r118	UTSW	17	55,915,484 (GRCm39)	missense	probably benign	0.36
R8248:Vmn2r118	UTSW	17	55,917,936 (GRCm39)	missense	probably benign	0.18
R8347:Vmn2r118	UTSW	17	55,917,423 (GRCm39)	missense	possibly damaging	0.94
R8415:Vmn2r118	UTSW	17	55,915,057 (GRCm39)	missense	probably benign	0.08
R8428:Vmn2r118	UTSW	17	55,915,642 (GRCm39)	missense	probably benign	0.33
R8917:Vmn2r118	UTSW	17	55,917,216 (GRCm39)	missense	possibly damaging	0.82
R8993:Vmn2r118	UTSW	17	55,917,835 (GRCm39)	missense	possibly damaging	0.72
R9038:Vmn2r118	UTSW	17	55,918,649 (GRCm39)	missense	probably damaging	1.00
R9155:Vmn2r118	UTSW	17	55,917,207 (GRCm39)	missense	probably null	0.83
R9603:Vmn2r118	UTSW	17	55,899,837 (GRCm39)	missense	probably damaging	1.00
R9742:Vmn2r118	UTSW	17	55,918,009 (GRCm39)	missense	probably damaging	0.98
R9749:Vmn2r118	UTSW	17	55,915,415 (GRCm39)	critical splice donor site	probably null
R9792:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
R9793:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
R9795:Vmn2r118	UTSW	17	55,899,496 (GRCm39)	missense	probably damaging	0.99
X0022:Vmn2r118	UTSW	17	55,900,218 (GRCm39)	missense	probably damaging	1.00
Z1176:Vmn2r118	UTSW	17	55,917,655 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- GAAGGTGACCCAAACACTGC -3'
(R):5'- ATTCTGTTCACTGTGGCCG -3'

Sequencing Primer
(F):5'- CAAAACACAAGCATGCTGAATGTTAG -3'
(R):5'- TCTGCGGTCTTGGCTAAAAC -3'

Posted On

2018-08-01