Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL01645:Or1d2'

102618

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Or1d2

Ensembl Gene

ENSMUSG00000058275

Gene Name

olfactory receptor family 1 subfamily D member 2

Synonyms

Olfr412, GA_x6K02T2P1NL-4500587-4501525, MOR127-5P

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.265) question?

Stock #

IGL01645

Quality Score

Status

Chromosome

Chromosomal Location

74255497-74256435 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 74256359 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 288 (I288T)

Ref Sequence

ENSEMBL: ENSMUSP00000149922 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000077794] [ENSMUST00000216362]

AlphaFold

Q7TRW7

Predicted Effect

possibly damaging
Transcript: ENSMUST00000077794
AA Change: I288T

PolyPhen 2 Score 0.948 (Sensitivity: 0.79; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000076967
Gene: ENSMUSG00000058275
AA Change: I288T

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	1.7e-51	PFAM
Pfam:7TM_GPCR_Srsx	35	172	1.8e-8	PFAM
Pfam:7tm_1	41	289	3.8e-28	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000216362
AA Change: I288T

PolyPhen 2 Score 0.948 (Sensitivity: 0.79; Specificity: 0.95)

Coding Region Coverage

Validation Efficiency

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc8	C	T	7: 45,764,477 (GRCm39)	C1156Y	possibly damaging	Het
Armh4	T	C	14: 50,011,011 (GRCm39)	E232G	probably damaging	Het
Atp8b1	G	A	18: 64,679,184 (GRCm39)	H766Y	probably benign	Het
Cacna2d1	C	A	5: 16,217,389 (GRCm39)		probably null	Het
Card11	T	A	5: 140,863,778 (GRCm39)	T987S	probably benign	Het
Dennd2b	T	A	7: 109,126,841 (GRCm39)	K540*	probably null	Het
Dmxl2	A	T	9: 54,286,017 (GRCm39)	Y2723N	possibly damaging	Het
Dnah11	T	A	12: 118,150,733 (GRCm39)	I342F	possibly damaging	Het
Dnajc10	A	G	2: 80,170,871 (GRCm39)	H454R	possibly damaging	Het
Dpy19l3	T	C	7: 35,394,763 (GRCm39)	T592A	probably benign	Het
Eea1	T	A	10: 95,825,451 (GRCm39)	S49T	probably damaging	Het
Esd	T	A	14: 74,987,159 (GRCm39)	N294K	probably benign	Het
Fmo3	A	G	1: 162,791,575 (GRCm39)	V234A	possibly damaging	Het
Folh1	A	G	7: 86,391,435 (GRCm39)	F420L	probably damaging	Het
Gabra1	T	C	11: 42,026,389 (GRCm39)	N301S	probably damaging	Het
Gm5422	A	T	10: 31,126,069 (GRCm39)		noncoding transcript	Het
Gorab	A	T	1: 163,214,000 (GRCm39)	L310Q	possibly damaging	Het
Gsdme	A	G	6: 50,228,316 (GRCm39)	Y51H	probably damaging	Het
Hrob	T	C	11: 102,146,012 (GRCm39)	L96P	probably damaging	Het
Itpr1	T	C	6: 108,450,560 (GRCm39)	I1964T	possibly damaging	Het
Lmbr1	A	G	5: 29,440,053 (GRCm39)	L410P	probably damaging	Het
Lrrc37a	T	C	11: 103,395,090 (GRCm39)	R112G	probably benign	Het
Mrgpra6	T	C	7: 46,835,681 (GRCm39)	T247A	probably benign	Het
Mroh4	A	G	15: 74,483,207 (GRCm39)		probably benign	Het
Mycbpap	T	C	11: 94,394,293 (GRCm39)		probably null	Het
Myoz2	T	A	3: 122,827,881 (GRCm39)	K12N	probably damaging	Het
Odad2	T	C	18: 7,268,491 (GRCm39)	S343G	probably benign	Het
P3h1	T	G	4: 119,093,980 (GRCm39)	F212V	probably damaging	Het
Pcnx2	T	C	8: 126,614,656 (GRCm39)	D265G	probably damaging	Het
Pkd1l3	C	T	8: 110,361,934 (GRCm39)	T992I	possibly damaging	Het
Prss58	T	C	6: 40,874,244 (GRCm39)	D144G	probably damaging	Het
Pth2	T	A	7: 44,830,764 (GRCm39)	L29Q	possibly damaging	Het
Rab1b	A	C	19: 5,154,962 (GRCm39)		probably benign	Het
Rasa2	A	T	9: 96,464,834 (GRCm39)	C190*	probably null	Het
Scn9a	T	C	2: 66,317,986 (GRCm39)	K1501E	possibly damaging	Het
Selenoi	A	G	5: 30,462,821 (GRCm39)		probably benign	Het
Slc11a2	T	C	15: 100,286,999 (GRCm39)	N558S	probably benign	Het
Sox10	T	C	15: 79,040,539 (GRCm39)	I173V	probably benign	Het
Sra1	A	C	18: 36,804,526 (GRCm39)	F476C	probably damaging	Het
Tmem119	T	A	5: 113,933,409 (GRCm39)	K131*	probably null	Het
Trim12c	T	A	7: 103,994,261 (GRCm39)	K198*	probably null	Het
Ttn	A	G	2: 76,681,904 (GRCm39)		probably benign	Het
Unc119b	C	T	5: 115,265,371 (GRCm39)	V154I	probably benign	Het
Usp47	T	A	7: 111,654,069 (GRCm39)	S108R	probably damaging	Het
Vmn1r15	T	A	6: 57,235,547 (GRCm39)	C138*	probably null	Het
Vmn1r191	T	C	13: 22,363,614 (GRCm39)	I47V	probably benign	Het
Wnt3	C	T	11: 103,703,204 (GRCm39)	A229V	probably benign	Het

Other mutations in Or1d2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01327:Or1d2	APN	11	74,255,738 (GRCm39)	missense	possibly damaging	0.82
IGL01395:Or1d2	APN	11	74,255,713 (GRCm39)	missense	probably damaging	1.00
IGL01418:Or1d2	APN	11	74,255,810 (GRCm39)	missense	possibly damaging	0.85
IGL02421:Or1d2	APN	11	74,256,017 (GRCm39)	missense	probably damaging	1.00
IGL02424:Or1d2	APN	11	74,256,299 (GRCm39)	missense	probably benign	0.09
R0206:Or1d2	UTSW	11	74,255,968 (GRCm39)	missense	probably benign	0.00
R0206:Or1d2	UTSW	11	74,255,968 (GRCm39)	missense	probably benign	0.00
R0278:Or1d2	UTSW	11	74,256,028 (GRCm39)	missense	probably damaging	1.00
R0698:Or1d2	UTSW	11	74,255,968 (GRCm39)	missense	probably benign	0.00
R1424:Or1d2	UTSW	11	74,255,780 (GRCm39)	missense	probably benign	0.05
R1549:Or1d2	UTSW	11	74,256,076 (GRCm39)	missense	probably benign	0.00
R1659:Or1d2	UTSW	11	74,255,759 (GRCm39)	missense	probably benign	0.01
R1755:Or1d2	UTSW	11	74,255,819 (GRCm39)	missense	probably damaging	1.00
R2031:Or1d2	UTSW	11	74,255,777 (GRCm39)	missense	probably damaging	1.00
R2185:Or1d2	UTSW	11	74,255,572 (GRCm39)	missense	probably benign
R3620:Or1d2	UTSW	11	74,256,050 (GRCm39)	missense	probably damaging	1.00
R4568:Or1d2	UTSW	11	74,256,035 (GRCm39)	missense	probably damaging	0.99
R4878:Or1d2	UTSW	11	74,255,674 (GRCm39)	missense	probably damaging	1.00
R7779:Or1d2	UTSW	11	74,255,771 (GRCm39)	missense	probably damaging	1.00
R8086:Or1d2	UTSW	11	74,255,780 (GRCm39)	missense	probably benign	0.05
R9155:Or1d2	UTSW	11	74,255,791 (GRCm39)	missense	probably benign	0.03
R9396:Or1d2	UTSW	11	74,256,089 (GRCm39)	missense	probably benign	0.01
R9750:Or1d2	UTSW	11	74,255,858 (GRCm39)	missense	possibly damaging	0.84

Posted On

2014-01-21