Incidental Mutation 'IGL03258:Akr1c6'
ID414720
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Akr1c6
Ensembl Gene ENSMUSG00000021210
Gene Namealdo-keto reductase family 1, member C6
Synonyms3alpha-HSD, estradiol 17-beta-dehydrogenase (A-specific), Hsd17b5, Akr1c1
Accession Numbers

Genbank: NM_030611; MGI: 1933427

Is this an essential gene? Probably non essential (E-score: 0.078) question?
Stock #IGL03258
Quality Score
Status
Chromosome13
Chromosomal Location4434306-4457877 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) G to T at 4436409 bp
ZygosityHeterozygous
Amino Acid Change Glycine to Cysteine at position 72 (G72C)
Ref Sequence ENSEMBL: ENSMUSP00000152575 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000021630] [ENSMUST00000156277] [ENSMUST00000220941]
Predicted Effect probably damaging
Transcript: ENSMUST00000021630
AA Change: G72C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000021630
Gene: ENSMUSG00000021210
AA Change: G72C

DomainStartEndE-ValueType
Pfam:Aldo_ket_red 18 301 2.2e-58 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000128695
Predicted Effect probably damaging
Transcript: ENSMUST00000156277
AA Change: G19C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000117624
Gene: ENSMUSG00000021210
AA Change: G19C

DomainStartEndE-ValueType
Pfam:Aldo_ket_red 1 173 3e-37 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000220941
AA Change: G72C

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the aldo/keto reductase superfamily, which consists of more than 40 known enzymes and proteins. These enzymes catalyze the conversion of aldehydes and ketones to their corresponding alcohols by utilizing NADH and/or NADPH as cofactors. The enzymes display overlapping but distinct substrate specificity. This enzyme catalyzes the bioreduction of chlordecone, a toxic organochlorine pesticide, to chlordecone alcohol in liver. This gene shares high sequence identity with three other gene members and is clustered with those three genes at chromosome 10p15-p14. [provided by RefSeq, Jul 2008]
Allele List at MGI

All alleles(1) : Targeted, knock-out(1)

Other mutations in this stock
Total: 27 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca4 T A 3: 122,137,561 probably benign Het
Adam1b A G 5: 121,501,384 S533P possibly damaging Het
Carf C T 1: 60,109,229 T28I possibly damaging Het
Cog1 G A 11: 113,655,093 W398* probably null Het
Dmpk A G 7: 19,092,206 probably null Het
Dmxl1 T C 18: 49,920,893 V2534A probably damaging Het
Fam78b A T 1: 167,078,754 T161S probably damaging Het
Fgd6 A T 10: 94,133,353 T1161S probably benign Het
Gpr158 A T 2: 21,825,274 D710V probably damaging Het
H2-Q4 A G 17: 35,380,119 I122V probably benign Het
Ifi211 A T 1: 173,905,532 C188S probably benign Het
Lamc3 A C 2: 31,887,683 S114R probably damaging Het
Lrrc57 C T 2: 120,605,222 A239T probably damaging Het
Mdga1 A G 17: 29,839,913 Y707H probably damaging Het
Ms4a6b T G 19: 11,521,708 L62R probably damaging Het
Mtmr4 A T 11: 87,612,003 H961L possibly damaging Het
Myrip A G 9: 120,441,352 N556S probably benign Het
Osgep T C 14: 50,917,889 T71A possibly damaging Het
Plin4 T C 17: 56,104,371 T887A probably benign Het
Pwwp2a T A 11: 43,704,565 F186I probably benign Het
Serpina1b G T 12: 103,730,396 S251R probably benign Het
Setd7 T C 3: 51,560,515 probably null Het
Slc24a5 G T 2: 125,080,705 probably null Het
Slc25a17 A G 15: 81,329,042 probably benign Het
Slc5a4a T C 10: 76,150,552 V98A possibly damaging Het
Susd1 A T 4: 59,379,655 I324N possibly damaging Het
Tcaf3 A G 6: 42,589,839 L772P probably damaging Het
Other mutations in Akr1c6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00163:Akr1c6 APN 13 4448978 splice site probably benign
IGL01838:Akr1c6 APN 13 4449036 missense probably benign 0.44
IGL02318:Akr1c6 APN 13 4438497 missense probably benign 0.05
IGL02986:Akr1c6 APN 13 4436415 missense probably benign 0.42
IGL03168:Akr1c6 APN 13 4436281 missense probably benign 0.04
IGL03190:Akr1c6 APN 13 4446413 missense possibly damaging 0.49
R0940:Akr1c6 UTSW 13 4436373 missense probably benign 0.42
R1442:Akr1c6 UTSW 13 4457160 missense probably damaging 1.00
R1624:Akr1c6 UTSW 13 4446364 missense probably benign
R1937:Akr1c6 UTSW 13 4446384 missense probably benign 0.01
R2392:Akr1c6 UTSW 13 4434478 splice site probably null
R2398:Akr1c6 UTSW 13 4449036 missense probably benign 0.44
R4655:Akr1c6 UTSW 13 4449429 missense probably damaging 0.98
R4761:Akr1c6 UTSW 13 4447011 missense probably benign 0.01
R4913:Akr1c6 UTSW 13 4454525 missense probably benign 0.18
R4923:Akr1c6 UTSW 13 4454495 missense probably damaging 1.00
R4953:Akr1c6 UTSW 13 4438609 splice site probably null
R5255:Akr1c6 UTSW 13 4447019 missense probably benign 0.20
R5452:Akr1c6 UTSW 13 4454545 missense probably benign 0.00
R5660:Akr1c6 UTSW 13 4449054 missense probably benign 0.13
R6242:Akr1c6 UTSW 13 4436362 missense probably benign 0.01
R6323:Akr1c6 UTSW 13 4447018 missense possibly damaging 0.91
R6599:Akr1c6 UTSW 13 4449319 unclassified probably null
R6847:Akr1c6 UTSW 13 4438498 nonsense probably null
R6989:Akr1c6 UTSW 13 4449046 missense probably damaging 1.00
R7003:Akr1c6 UTSW 13 4454515 missense probably benign 0.14
R7251:Akr1c6 UTSW 13 4447020 missense probably damaging 1.00
R7310:Akr1c6 UTSW 13 4436355 missense probably benign
X0062:Akr1c6 UTSW 13 4438535 missense possibly damaging 0.94
Posted On2016-08-02