Incidental Mutation 'IGL01531:Stau2'
| ID |
89780 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Stau2
|
| Ensembl Gene |
ENSMUSG00000025920 |
| Gene Name |
staufen double-stranded RNA binding protein 2 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
IGL01531
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
1 |
| Chromosomal Location |
16298898-16590336 bp(-) (GRCm39) |
| Type of Mutation |
makesense |
| DNA Base Change (assembly) |
T to C
at 16415922 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Stop codon to Tryptophan
at position 480
(*480W)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000124303
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000027052]
[ENSMUST00000054668]
[ENSMUST00000127420]
[ENSMUST00000128957]
[ENSMUST00000131257]
[ENSMUST00000149320]
[ENSMUST00000162751]
[ENSMUST00000162007]
[ENSMUST00000159558]
[ENSMUST00000162627]
[ENSMUST00000162435]
|
| AlphaFold |
Q8CJ67 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000027052
|
| SMART Domains |
Protein: ENSMUSP00000027052
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
3e-3 |
SMART |
|
DSRM
|
64 |
148 |
2.36e-7 |
SMART |
|
DSRM
|
176 |
241 |
1.84e-18 |
SMART |
|
DSRM
|
276 |
342 |
5.45e-21 |
SMART |
|
low complexity region
|
415 |
433 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
434 |
479 |
5e-6 |
PDB |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000054668
|
| SMART Domains |
Protein: ENSMUSP00000053190
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
DSRM
|
9 |
74 |
1.17e-11 |
SMART |
|
DSRM
|
96 |
180 |
2.36e-7 |
SMART |
|
DSRM
|
208 |
273 |
1.84e-18 |
SMART |
|
DSRM
|
308 |
374 |
5.45e-21 |
SMART |
|
low complexity region
|
447 |
465 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
466 |
511 |
6e-6 |
PDB |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000115360
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000127420
|
| SMART Domains |
Protein: ENSMUSP00000122116
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
2e-4 |
SMART |
|
Blast:DSRM
|
5 |
42 |
9e-17 |
BLAST |
|
Blast:DSRM
|
64 |
110 |
2e-25 |
BLAST |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000128957
AA Change: *512W
|
| SMART Domains |
Protein: ENSMUSP00000122410
Gene: ENSMUSG00000025920
AA Change: *512W
| Domain | Start | End | E-Value | Type |
|---|
|
DSRM
|
9 |
74 |
1.17e-11 |
SMART |
|
DSRM
|
96 |
180 |
2.36e-7 |
SMART |
|
DSRM
|
208 |
273 |
1.84e-18 |
SMART |
|
DSRM
|
308 |
374 |
5.45e-21 |
SMART |
|
low complexity region
|
447 |
465 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
466 |
511 |
2e-6 |
PDB |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000131257
AA Change: *474W
|
| SMART Domains |
Protein: ENSMUSP00000121410
Gene: ENSMUSG00000025920
AA Change: *474W
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
1 |
34 |
9e-3 |
SMART |
|
DSRM
|
58 |
142 |
2.36e-7 |
SMART |
|
DSRM
|
170 |
235 |
1.84e-18 |
SMART |
|
DSRM
|
270 |
336 |
5.45e-21 |
SMART |
|
low complexity region
|
409 |
427 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
428 |
473 |
2e-6 |
PDB |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000149320
AA Change: *512W
|
| SMART Domains |
Protein: ENSMUSP00000118489
Gene: ENSMUSG00000025920
AA Change: *512W
| Domain | Start | End | E-Value | Type |
|---|
|
DSRM
|
9 |
74 |
1.17e-11 |
SMART |
|
DSRM
|
96 |
180 |
2.36e-7 |
SMART |
|
DSRM
|
208 |
273 |
1.84e-18 |
SMART |
|
DSRM
|
308 |
374 |
5.45e-21 |
SMART |
|
low complexity region
|
447 |
465 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
466 |
511 |
2e-6 |
PDB |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000162751
|
| SMART Domains |
Protein: ENSMUSP00000124505
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
DSRM
|
9 |
74 |
1.17e-11 |
SMART |
|
DSRM
|
96 |
180 |
2.36e-7 |
SMART |
|
DSRM
|
208 |
273 |
1.84e-18 |
SMART |
|
DSRM
|
308 |
374 |
5.45e-21 |
SMART |
|
Pfam:Staufen_C
|
455 |
523 |
6.5e-19 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000162007
AA Change: *480W
|
| SMART Domains |
Protein: ENSMUSP00000124303
Gene: ENSMUSG00000025920
AA Change: *480W
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
2e-3 |
SMART |
|
DSRM
|
64 |
148 |
2.36e-7 |
SMART |
|
DSRM
|
176 |
241 |
1.84e-18 |
SMART |
|
DSRM
|
276 |
342 |
5.45e-21 |
SMART |
|
low complexity region
|
415 |
433 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
434 |
479 |
2e-6 |
PDB |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000159558
AA Change: *480W
|
| SMART Domains |
Protein: ENSMUSP00000125726
Gene: ENSMUSG00000025920
AA Change: *480W
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
2e-3 |
SMART |
|
DSRM
|
64 |
148 |
2.36e-7 |
SMART |
|
DSRM
|
176 |
241 |
1.84e-18 |
SMART |
|
DSRM
|
276 |
342 |
5.45e-21 |
SMART |
|
low complexity region
|
415 |
433 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
434 |
479 |
2e-6 |
PDB |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000162627
|
| SMART Domains |
Protein: ENSMUSP00000123781
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
3e-3 |
SMART |
|
DSRM
|
64 |
148 |
2.36e-7 |
SMART |
|
DSRM
|
176 |
241 |
1.84e-18 |
SMART |
|
DSRM
|
276 |
342 |
5.45e-21 |
SMART |
|
low complexity region
|
415 |
433 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
434 |
479 |
5e-6 |
PDB |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000162435
|
| SMART Domains |
Protein: ENSMUSP00000123827
Gene: ENSMUSG00000025920
| Domain | Start | End | E-Value | Type |
|---|
|
SCOP:d1di2a_
|
5 |
40 |
3e-3 |
SMART |
|
DSRM
|
64 |
148 |
2.36e-7 |
SMART |
|
DSRM
|
176 |
241 |
1.84e-18 |
SMART |
|
DSRM
|
276 |
342 |
5.45e-21 |
SMART |
|
low complexity region
|
415 |
433 |
N/A |
INTRINSIC |
|
PDB:4DKK|A
|
434 |
479 |
5e-6 |
PDB |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Staufen homolog 2 is a member of the family of double-stranded RNA (dsRNA)-binding proteins involved in the transport and/or localization of mRNAs to different subcellular compartments and/or organelles. These proteins are characterized by the presence of multiple dsRNA-binding domains which are required to bind RNAs having double-stranded secondary structures. Staufen homolog 2 shares 48.5% and 59.9% similarity with drosophila and human staufen, respectively. The exact function of Staufen homolog 2 is not known, but since it contains 3 copies of conserved dsRNA binding domain, it could be involved in double-stranded RNA binding events. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2009]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 34 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 4833420G17Rik |
T |
A |
13: 119,603,494 (GRCm39) |
|
probably null |
Het |
| Abtb3 |
T |
C |
10: 85,465,069 (GRCm39) |
|
probably benign |
Het |
| Adcy1 |
T |
C |
11: 7,119,414 (GRCm39) |
V1019A |
possibly damaging |
Het |
| Blm |
A |
G |
7: 80,123,819 (GRCm39) |
Y1004H |
probably damaging |
Het |
| Cachd1 |
A |
C |
4: 100,810,231 (GRCm39) |
I278L |
probably benign |
Het |
| Ddx18 |
T |
A |
1: 121,492,315 (GRCm39) |
T131S |
probably benign |
Het |
| Dgkd |
T |
C |
1: 87,808,133 (GRCm39) |
F67S |
probably damaging |
Het |
| Dlgap1 |
A |
G |
17: 70,823,374 (GRCm39) |
T120A |
probably damaging |
Het |
| Dnaja3 |
T |
G |
16: 4,512,268 (GRCm39) |
V224G |
probably damaging |
Het |
| Dntt |
A |
T |
19: 41,041,677 (GRCm39) |
R454* |
probably null |
Het |
| Dync2h1 |
T |
A |
9: 7,071,111 (GRCm39) |
T3083S |
probably benign |
Het |
| Eea1 |
C |
A |
10: 95,867,539 (GRCm39) |
T1045K |
probably damaging |
Het |
| Gpnmb |
T |
A |
6: 49,024,392 (GRCm39) |
|
probably benign |
Het |
| Hirip3 |
A |
G |
7: 126,462,548 (GRCm39) |
E108G |
possibly damaging |
Het |
| Il33 |
C |
A |
19: 29,929,381 (GRCm39) |
Q35K |
possibly damaging |
Het |
| Il6ra |
G |
A |
3: 89,793,350 (GRCm39) |
L267F |
probably damaging |
Het |
| Impact |
C |
T |
18: 13,109,076 (GRCm39) |
S69F |
probably benign |
Het |
| Klk1b9 |
G |
A |
7: 43,441,675 (GRCm39) |
G39D |
probably damaging |
Het |
| Ldah |
A |
G |
12: 8,277,337 (GRCm39) |
D91G |
probably benign |
Het |
| Lrp4 |
T |
C |
2: 91,341,898 (GRCm39) |
L1837P |
probably damaging |
Het |
| Mov10l1 |
T |
A |
15: 88,938,555 (GRCm39) |
H1204Q |
probably damaging |
Het |
| Nlrp4c |
A |
G |
7: 6,063,655 (GRCm39) |
E21G |
probably damaging |
Het |
| Or12k8 |
T |
C |
2: 36,975,407 (GRCm39) |
M118V |
possibly damaging |
Het |
| Or52ae9 |
T |
A |
7: 103,390,321 (GRCm39) |
N42I |
probably damaging |
Het |
| Osbpl1a |
T |
G |
18: 13,066,638 (GRCm39) |
K40N |
probably damaging |
Het |
| Ptprd |
T |
C |
4: 76,003,757 (GRCm39) |
T1010A |
probably damaging |
Het |
| Rp1 |
A |
G |
1: 4,419,168 (GRCm39) |
V648A |
probably benign |
Het |
| Scn9a |
T |
C |
2: 66,367,722 (GRCm39) |
K654E |
probably benign |
Het |
| Sema3d |
A |
G |
5: 12,591,047 (GRCm39) |
I309V |
probably benign |
Het |
| Slc6a2 |
T |
C |
8: 93,722,310 (GRCm39) |
L519P |
probably damaging |
Het |
| Stard9 |
A |
G |
2: 120,504,085 (GRCm39) |
I211V |
possibly damaging |
Het |
| Svopl |
T |
C |
6: 38,003,876 (GRCm39) |
|
probably benign |
Het |
| Virma |
A |
G |
4: 11,528,753 (GRCm39) |
E1330G |
probably damaging |
Het |
| Zan |
G |
A |
5: 137,422,874 (GRCm39) |
T2713I |
unknown |
Het |
|
| Other mutations in Stau2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01809:Stau2
|
APN |
1 |
16,510,539 (GRCm39) |
splice site |
probably null |
|
|
IGL01895:Stau2
|
APN |
1 |
16,416,161 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02164:Stau2
|
APN |
1 |
16,416,052 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02507:Stau2
|
APN |
1 |
16,556,293 (GRCm39) |
missense |
possibly damaging |
0.93 |
|
R0124:Stau2
|
UTSW |
1 |
16,533,352 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0595:Stau2
|
UTSW |
1 |
16,510,674 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1104:Stau2
|
UTSW |
1 |
16,510,585 (GRCm39) |
nonsense |
probably null |
|
|
R1296:Stau2
|
UTSW |
1 |
16,510,596 (GRCm39) |
missense |
probably benign |
|
|
R1359:Stau2
|
UTSW |
1 |
16,462,790 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2884:Stau2
|
UTSW |
1 |
16,301,290 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R4066:Stau2
|
UTSW |
1 |
16,464,283 (GRCm39) |
missense |
possibly damaging |
0.83 |
|
R4718:Stau2
|
UTSW |
1 |
16,416,269 (GRCm39) |
splice site |
probably null |
|
|
R5496:Stau2
|
UTSW |
1 |
16,460,245 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6232:Stau2
|
UTSW |
1 |
16,445,035 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6447:Stau2
|
UTSW |
1 |
16,460,049 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R6964:Stau2
|
UTSW |
1 |
16,460,229 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7317:Stau2
|
UTSW |
1 |
16,530,553 (GRCm39) |
missense |
unknown |
|
|
R7885:Stau2
|
UTSW |
1 |
16,530,577 (GRCm39) |
missense |
unknown |
|
|
R8142:Stau2
|
UTSW |
1 |
16,530,575 (GRCm39) |
missense |
unknown |
|
|
R8161:Stau2
|
UTSW |
1 |
16,416,049 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9173:Stau2
|
UTSW |
1 |
16,444,933 (GRCm39) |
nonsense |
probably null |
|
|
R9774:Stau2
|
UTSW |
1 |
16,445,010 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R9787:Stau2
|
UTSW |
1 |
16,530,595 (GRCm39) |
missense |
unknown |
|
|
| Posted On |
2013-12-03 |
Incidental Mutation