Mutagenetix > Incidental Mutation

Incidental Mutation 'R1867:Il1rap'

208878

Institutional Source

Beutler Lab

Gene Symbol

Il1rap

Ensembl Gene

ENSMUSG00000022514

Gene Name

interleukin 1 receptor accessory protein

Synonyms

IL-1RAcP, 6430709H04Rik, IL-1R AcP

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R1867 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

26400454-26548867 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 26541676 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Histidine to Leucine at position 639 (H639L)

Ref Sequence

ENSEMBL: ENSMUSP00000128100 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000096129] [ENSMUST00000166294]

AlphaFold

Q61730

Predicted Effect

probably damaging
Transcript: ENSMUST00000096129
AA Change: H639L

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000093843
Gene: ENSMUSG00000022514
AA Change: H639L

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
IG	32	132	1.21e-2	SMART
IG	145	232	4.04e0	SMART
IG	251	350	1.46e-5	SMART
low complexity region	368	381	N/A	INTRINSIC
TIR	404	547	1.38e-25	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000166294
AA Change: H639L

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000128100
Gene: ENSMUSG00000022514
AA Change: H639L

Domain	Start	End	E-Value	Type
signal peptide	1	20	N/A	INTRINSIC
IG	32	132	1.21e-2	SMART
IG	145	232	4.04e0	SMART
IG	251	350	1.46e-5	SMART
low complexity region	368	381	N/A	INTRINSIC
TIR	404	547	1.38e-25	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000172522

Predicted Effect

unknown
Transcript: ENSMUST00000173136
AA Change: H164L

SMART Domains

Protein: ENSMUSP00000133294
Gene: ENSMUSG00000022514
AA Change: H164L

Domain	Start	End	E-Value	Type
Blast:TIR	2	154	3e-48	BLAST

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174385

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000174644

Coding Region Coverage

1x: 97.3%
3x: 96.8%
10x: 95.3%
20x: 92.8%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Interleukin 1 induces synthesis of acute phase and proinflammatory proteins during infection, tissue damage, or stress, by forming a complex at the cell membrane with an interleukin 1 receptor and an accessory protein. This gene encodes the interleukin 1 receptor accessory protein. The protein is a necessary part of the interleukin 1 receptor complex which initiates signalling events that result in the activation of interleukin 1-responsive genes. Alternative splicing of this gene results in two transcript variants encoding two different isoforms, one membrane-bound and one soluble. The ratio of soluble to membrane-bound forms increases during acute-phase induction or stress. [provided by RefSeq, Nov 2009]
PHENOTYPE: Mice homozygous for a knock-out allele are viable, fertile and grossly normal but show no biological response to IL-1. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 102 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9130230L23Rik	A	T	5: 66,157,560 (GRCm39)	M1K	probably null	Het
Abca4	T	A	3: 121,899,010 (GRCm39)	I664N	probably damaging	Het
Acin1	T	C	14: 54,881,718 (GRCm39)	D335G	probably damaging	Het
Acoxl	A	G	2: 127,719,707 (GRCm39)	Y156C	probably damaging	Het
Adamts20	A	G	15: 94,236,340 (GRCm39)	F844L	probably benign	Het
Ago1	A	G	4: 126,335,029 (GRCm39)	Y398H	probably damaging	Het
Aldob	A	G	4: 49,543,835 (GRCm39)	V49A	possibly damaging	Het
Arhgap18	A	G	10: 26,722,026 (GRCm39)	E71G	probably damaging	Het
Asb12	G	T	X: 94,513,950 (GRCm39)	H307N	probably damaging	Het
Atp2b1	T	C	10: 98,832,750 (GRCm39)	V417A	probably damaging	Het
AY358078	T	C	14: 52,037,504 (GRCm39)	M1T	probably null	Het
Bcl2l15	A	G	3: 103,745,914 (GRCm39)		probably null	Het
Brpf3	A	G	17: 29,026,342 (GRCm39)	M472V	probably benign	Het
Bsn	A	G	9: 107,983,918 (GRCm39)	S3379P	unknown	Het
Cap2	T	C	13: 46,793,555 (GRCm39)	V333A	probably damaging	Het
Cd207	T	A	6: 83,652,635 (GRCm39)	D165V	probably damaging	Het
Cfap210	A	T	2: 69,612,181 (GRCm39)		probably null	Het
Cmtr1	A	G	17: 29,893,148 (GRCm39)	T496A	probably benign	Het
Col14a1	T	A	15: 55,310,858 (GRCm39)		probably benign	Het
Cstb	A	G	10: 78,263,273 (GRCm39)	*99W	probably null	Het
Cstdc6	T	G	16: 36,142,148 (GRCm39)	D76A	possibly damaging	Het
Ddx11	G	A	17: 66,442,934 (GRCm39)		probably null	Het
Dip2c	T	C	13: 9,671,985 (GRCm39)	M990T	possibly damaging	Het
Epc2	A	G	2: 49,422,117 (GRCm39)	Y337C	probably damaging	Het
Fmn1	A	G	2: 113,539,783 (GRCm39)	E1326G	probably damaging	Het
Focad	A	T	4: 88,096,326 (GRCm39)	D236V	probably damaging	Het
Fsd1	G	A	17: 56,298,254 (GRCm39)	S193N	probably benign	Het
Gm4922	T	A	10: 18,660,211 (GRCm39)	R170S	possibly damaging	Het
Gm5129	T	C	5: 29,940,654 (GRCm39)		probably benign	Het
Gucy2d	T	A	7: 98,103,268 (GRCm39)	L504H	probably damaging	Het
Hspbap1	A	T	16: 35,621,934 (GRCm39)	Y93F	possibly damaging	Het
Iars2	A	T	1: 185,050,765 (GRCm39)	D441E	probably benign	Het
Inhbc	A	T	10: 127,193,416 (GRCm39)	V200E	probably benign	Het
Ints8	C	A	4: 11,241,684 (GRCm39)	C253F	probably damaging	Het
Intu	G	T	3: 40,618,765 (GRCm39)	G257V	probably damaging	Het
Kif23	C	A	9: 61,826,243 (GRCm39)	A929S	possibly damaging	Het
Kmt2b	A	T	7: 30,274,083 (GRCm39)	V2207E	possibly damaging	Het
Ksr2	A	C	5: 117,643,594 (GRCm39)	E121A	probably benign	Het
Lce1b	A	G	3: 92,563,318 (GRCm39)	S72P	unknown	Het
Lpl	TGG	TG	8: 69,349,254 (GRCm39)		probably null	Het
Mcmdc2	T	C	1: 10,001,030 (GRCm39)	V435A	probably damaging	Het
Mecom	A	G	3: 30,563,577 (GRCm39)		probably null	Het
Mier2	A	G	10: 79,384,664 (GRCm39)	V150A	probably damaging	Het
Mmp16	A	T	4: 18,116,013 (GRCm39)	D539V	probably benign	Het
Mpp1	A	G	X: 74,168,975 (GRCm39)		probably null	Het
Mpp2	C	T	11: 101,955,493 (GRCm39)	E86K	probably benign	Het
Mtor	T	A	4: 148,539,089 (GRCm39)	F195L	probably damaging	Het
Myo3a	T	C	2: 22,404,657 (GRCm39)	I663T	probably benign	Het
Nlrp5	G	A	7: 23,123,407 (GRCm39)	G756E	possibly damaging	Het
Nudt18	T	C	14: 70,817,335 (GRCm39)	L255P	probably damaging	Het
Nup62	T	A	7: 44,478,472 (GRCm39)	S162R	possibly damaging	Het
Oosp2	C	T	19: 11,626,959 (GRCm39)		probably null	Het
Or52n20	T	A	7: 104,320,524 (GRCm39)	I205N	possibly damaging	Het
Or6c66	A	T	10: 129,461,621 (GRCm39)	I103K	probably damaging	Het
Or7g20	G	A	9: 18,946,562 (GRCm39)	A48T	probably benign	Het
Or8h7	A	G	2: 86,720,956 (GRCm39)	S188P	probably damaging	Het
Pan2	A	G	10: 128,149,050 (GRCm39)	D506G	probably damaging	Het
Pcdh9	G	A	14: 94,125,471 (GRCm39)	S233L	probably damaging	Het
Pcdhgc5	T	G	18: 37,954,471 (GRCm39)	S582A	possibly damaging	Het
Pdik1l	T	C	4: 134,006,222 (GRCm39)	D70G	probably damaging	Het
Peg12	T	C	7: 62,113,416 (GRCm39)	H227R	probably benign	Het
Pms1	C	T	1: 53,228,546 (GRCm39)	V901I	probably benign	Het
Pnisr	C	T	4: 21,874,086 (GRCm39)		probably benign	Het
Pole	A	G	5: 110,482,063 (GRCm39)	E135G	probably benign	Het
Ppp6r2	C	A	15: 89,166,141 (GRCm39)	A715E	probably benign	Het
Prickle4	T	G	17: 48,001,044 (GRCm39)	H174P	possibly damaging	Het
Prl2a1	T	C	13: 27,988,923 (GRCm39)	L16P	probably damaging	Het
Prss32	C	T	17: 24,072,868 (GRCm39)	T33M	probably benign	Het
Psmd13	C	T	7: 140,463,430 (GRCm39)	T38I	probably damaging	Het
Rai14	C	A	15: 10,633,314 (GRCm39)	Q25H	probably damaging	Het
Rbbp6	T	C	7: 122,596,252 (GRCm39)	V598A	probably damaging	Het
Rbm34	C	A	8: 127,697,631 (GRCm39)	A27S	probably benign	Het
Rbm4b	A	G	19: 4,812,331 (GRCm39)	T247A	probably benign	Het
Riiad1	G	A	3: 94,380,176 (GRCm39)	P40S	possibly damaging	Het
Sema4f	T	C	6: 82,894,824 (GRCm39)	D457G	possibly damaging	Het
Sema6c	A	T	3: 95,078,099 (GRCm39)	I492F	probably damaging	Het
Serpina3a	A	T	12: 104,084,886 (GRCm39)	I94L	probably benign	Het
Skida1	TTGCTGCTGCTGCTGCTGCTGCTGCTG	TTGCTGCTGCTGCTGCTGCTGCTG	2: 18,051,155 (GRCm39)		probably benign	Het
Slc38a1	G	A	15: 96,485,016 (GRCm39)	T221M	probably damaging	Het
Slc6a17	T	A	3: 107,379,492 (GRCm39)	M559L	probably damaging	Het
Sntg2	T	C	12: 30,286,650 (GRCm39)	N315D	probably benign	Het
Snx10	T	A	6: 51,552,890 (GRCm39)	V11E	probably damaging	Het
Spta1	A	G	1: 174,047,405 (GRCm39)	E1683G	probably benign	Het
Ssc5d	A	T	7: 4,931,506 (GRCm39)	R238W	probably damaging	Het
Ssh1	A	T	5: 114,081,512 (GRCm39)	F617L	probably damaging	Het
Taf1	T	G	X: 100,606,563 (GRCm39)	M1254R	probably damaging	Het
Tcirg1	A	G	19: 3,948,835 (GRCm39)	L450P	probably damaging	Het
Ticam1	C	A	17: 56,578,718 (GRCm39)	A126S	probably benign	Het
Tnxb	T	A	17: 34,890,821 (GRCm39)	V388E	probably damaging	Het
Tomm5	A	G	4: 45,107,939 (GRCm39)	L32P	probably damaging	Het
Ubr5	A	T	15: 38,042,090 (GRCm39)	S169T	probably benign	Het
Usp28	T	G	9: 48,920,494 (GRCm39)	D240E	probably benign	Het
Usp34	T	C	11: 23,311,593 (GRCm39)	Y462H	possibly damaging	Het
Utp14b	C	A	1: 78,643,148 (GRCm39)	Q349K	probably damaging	Het
Utp20	G	T	10: 88,585,305 (GRCm39)	D2586E	probably benign	Het
Vmn1r173	A	G	7: 23,402,660 (GRCm39)	I298M	unknown	Het
Vmn1r37	T	A	6: 66,708,461 (GRCm39)	I29K	probably benign	Het
Vmn2r23	G	A	6: 123,679,874 (GRCm39)	G32D	probably damaging	Het
Xpo7	A	T	14: 70,931,431 (GRCm39)	F296I	probably damaging	Het
Zfhx4	A	G	3: 5,477,774 (GRCm39)	E3463G	probably damaging	Het
Zfp455	G	T	13: 67,355,509 (GRCm39)	R194L	probably benign	Het
Zfp663	T	C	2: 165,194,651 (GRCm39)	T523A	possibly damaging	Het

Other mutations in Il1rap

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00402:Il1rap	APN	16	26,541,151 (GRCm39)	missense	possibly damaging	0.77
IGL00976:Il1rap	APN	16	26,517,589 (GRCm39)	missense	probably benign	0.09
IGL01075:Il1rap	APN	16	26,498,987 (GRCm39)	missense	possibly damaging	0.94
IGL01665:Il1rap	APN	16	26,541,463 (GRCm39)	missense	probably damaging	1.00
IGL01962:Il1rap	APN	16	26,529,318 (GRCm39)	nonsense	probably null
IGL02101:Il1rap	APN	16	26,442,932 (GRCm39)	missense	possibly damaging	0.61
IGL02411:Il1rap	APN	16	26,529,366 (GRCm39)	missense	probably damaging	1.00
IGL03132:Il1rap	APN	16	26,498,869 (GRCm39)	missense	probably damaging	1.00
bacchus	UTSW	16	26,529,382 (GRCm39)	critical splice donor site	probably null
I1329:Il1rap	UTSW	16	26,511,600 (GRCm39)	missense	probably benign	0.07
LCD18:Il1rap	UTSW	16	26,450,343 (GRCm39)	intron	probably benign
PIT1430001:Il1rap	UTSW	16	26,529,343 (GRCm39)	missense	possibly damaging	0.53
R0302:Il1rap	UTSW	16	26,511,544 (GRCm39)	missense	probably benign	0.02
R0454:Il1rap	UTSW	16	26,517,625 (GRCm39)	missense	probably damaging	1.00
R0481:Il1rap	UTSW	16	26,511,585 (GRCm39)	missense	probably damaging	1.00
R0612:Il1rap	UTSW	16	26,519,855 (GRCm39)	missense	possibly damaging	0.48
R0765:Il1rap	UTSW	16	26,529,382 (GRCm39)	critical splice donor site	probably null
R1552:Il1rap	UTSW	16	26,541,184 (GRCm39)	missense	possibly damaging	0.79
R1801:Il1rap	UTSW	16	26,517,625 (GRCm39)	missense	probably damaging	1.00
R1942:Il1rap	UTSW	16	26,541,205 (GRCm39)	missense	probably damaging	1.00
R1996:Il1rap	UTSW	16	26,541,243 (GRCm39)	missense	probably benign	0.06
R2118:Il1rap	UTSW	16	26,529,315 (GRCm39)	missense	probably damaging	1.00
R2122:Il1rap	UTSW	16	26,529,315 (GRCm39)	missense	probably damaging	1.00
R2124:Il1rap	UTSW	16	26,529,315 (GRCm39)	missense	probably damaging	1.00
R3104:Il1rap	UTSW	16	26,541,502 (GRCm39)	missense	probably benign	0.01
R3105:Il1rap	UTSW	16	26,541,502 (GRCm39)	missense	probably benign	0.01
R3106:Il1rap	UTSW	16	26,541,502 (GRCm39)	missense	probably benign	0.01
R3891:Il1rap	UTSW	16	26,495,606 (GRCm39)	missense	probably damaging	1.00
R4133:Il1rap	UTSW	16	26,541,636 (GRCm39)	missense	probably benign	0.34
R4409:Il1rap	UTSW	16	26,531,015 (GRCm39)	splice site	probably null
R4610:Il1rap	UTSW	16	26,533,526 (GRCm39)	missense	probably benign	0.11
R4755:Il1rap	UTSW	16	26,541,532 (GRCm39)	missense	probably benign	0.20
R4776:Il1rap	UTSW	16	26,511,549 (GRCm39)	missense	possibly damaging	0.57
R4793:Il1rap	UTSW	16	26,513,984 (GRCm39)	missense	probably benign	0.09
R4811:Il1rap	UTSW	16	26,519,988 (GRCm39)	critical splice donor site	probably null
R4834:Il1rap	UTSW	16	26,495,685 (GRCm39)	missense	probably damaging	1.00
R5119:Il1rap	UTSW	16	26,442,949 (GRCm39)	missense	probably benign	0.01
R5744:Il1rap	UTSW	16	26,498,974 (GRCm39)	missense	probably benign	0.01
R6108:Il1rap	UTSW	16	26,541,457 (GRCm39)	missense	probably damaging	1.00
R6149:Il1rap	UTSW	16	26,530,969 (GRCm39)	missense	probably damaging	1.00
R6233:Il1rap	UTSW	16	26,529,256 (GRCm39)	missense	probably benign	0.24
R6246:Il1rap	UTSW	16	26,533,631 (GRCm39)	missense	probably benign
R6249:Il1rap	UTSW	16	26,511,598 (GRCm39)	missense	possibly damaging	0.88
R6254:Il1rap	UTSW	16	26,514,020 (GRCm39)	missense	probably benign
R6748:Il1rap	UTSW	16	26,541,106 (GRCm39)	missense	probably benign	0.02
R7151:Il1rap	UTSW	16	26,530,878 (GRCm39)	missense	probably damaging	1.00
R7794:Il1rap	UTSW	16	26,541,658 (GRCm39)	missense	probably benign
R7818:Il1rap	UTSW	16	26,517,597 (GRCm39)	missense	probably damaging	1.00
R7819:Il1rap	UTSW	16	26,541,151 (GRCm39)	missense	possibly damaging	0.77
R7863:Il1rap	UTSW	16	26,495,461 (GRCm39)	missense	probably damaging	1.00
R8240:Il1rap	UTSW	16	26,520,001 (GRCm39)	missense	probably benign
R8559:Il1rap	UTSW	16	26,530,884 (GRCm39)	missense	probably benign	0.29
R8934:Il1rap	UTSW	16	26,495,734 (GRCm39)	missense	probably damaging	1.00
R8986:Il1rap	UTSW	16	26,533,696 (GRCm39)	missense	probably damaging	1.00
R9261:Il1rap	UTSW	16	26,541,724 (GRCm39)	missense	possibly damaging	0.83
R9286:Il1rap	UTSW	16	26,517,604 (GRCm39)	missense	possibly damaging	0.89
R9326:Il1rap	UTSW	16	26,495,641 (GRCm39)	missense	probably damaging	1.00
R9408:Il1rap	UTSW	16	26,533,675 (GRCm39)	missense	possibly damaging	0.91
R9493:Il1rap	UTSW	16	26,541,702 (GRCm39)	missense	probably benign	0.00
R9723:Il1rap	UTSW	16	26,442,907 (GRCm39)	start codon destroyed	probably null	0.97
X0027:Il1rap	UTSW	16	26,519,897 (GRCm39)	missense	probably benign	0.20
X0028:Il1rap	UTSW	16	26,495,714 (GRCm39)	missense	probably damaging	1.00
Z1176:Il1rap	UTSW	16	26,541,149 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- GTCTGGATCATGTTCAGAGGAG -3'
(R):5'- GTTGGTAGAAACAGCAGCCAC -3'

Sequencing Primer
(F):5'- AGTCGTTTGAAAGAGCCCC -3'
(R):5'- GCCACCACCCTCCACATAAAG -3'

Posted On

2014-06-30