Mutagenetix > Incidental Mutation

Incidental Mutation 'R5838:Unk'

449748

Institutional Source

Beutler Lab

Gene Symbol

Unk

Ensembl Gene

ENSMUSG00000020770

Gene Name

unkempt family zinc finger

Synonyms

Zc3h5, B230379M23Rik

MMRRC Submission

044058-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.836) question?

Stock #

R5838 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

115921148-115952040 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 115940157 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamic Acid to Glycine at position 170 (E170G)

Ref Sequence

ENSEMBL: ENSMUSP00000102060 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021116] [ENSMUST00000106452]

AlphaFold

Q8BL48

Predicted Effect

probably damaging
Transcript: ENSMUST00000021116
AA Change: E170G

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000021116
Gene: ENSMUSG00000020770
AA Change: E170G

Domain	Start	End	E-Value	Type
low complexity region	4	19	N/A	INTRINSIC
low complexity region	70	78	N/A	INTRINSIC
ZnF_C3H1	85	112	1.03e-2	SMART
ZnF_C3H1	124	153	4.3e1	SMART
ZnF_C3H1	215	240	1.1e0	SMART
ZnF_C3H1	251	284	2.17e-1	SMART
ZnF_C3H1	293	320	1.38e-3	SMART
low complexity region	347	365	N/A	INTRINSIC
low complexity region	467	489	N/A	INTRINSIC
low complexity region	563	585	N/A	INTRINSIC
coiled coil region	643	723	N/A	INTRINSIC
RING	769	800	2.74e-2	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000106452
AA Change: E170G

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000102060
Gene: ENSMUSG00000020770
AA Change: E170G

Domain	Start	End	E-Value	Type
low complexity region	4	19	N/A	INTRINSIC
low complexity region	70	78	N/A	INTRINSIC
ZnF_C3H1	85	112	1.03e-2	SMART
ZnF_C3H1	124	153	4.3e1	SMART
ZnF_C3H1	215	240	1.1e0	SMART
ZnF_C3H1	251	284	2.17e-1	SMART
ZnF_C3H1	293	320	1.38e-3	SMART
low complexity region	454	476	N/A	INTRINSIC
low complexity region	550	572	N/A	INTRINSIC
coiled coil region	630	710	N/A	INTRINSIC
RING	756	787	2.74e-2	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150759

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000175702

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000176212

Coding Region Coverage

1x: 99.9%
3x: 99.7%
10x: 98.5%
20x: 95.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 72 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Ace	G	A	11: 105,863,706 (GRCm39)	V385I	probably benign	Het
Apmap	T	C	2: 150,427,777 (GRCm39)	Y315C	probably damaging	Het
Arhgef12	G	A	9: 42,916,904 (GRCm39)	T414I	probably damaging	Het
Cd200r1	C	A	16: 44,586,397 (GRCm39)	A9D	possibly damaging	Het
Cdkal1	T	C	13: 29,875,669 (GRCm39)	D183G	probably benign	Het
Clk1	C	A	1: 58,451,819 (GRCm39)	C432F	probably damaging	Het
Col27a1	G	T	4: 63,143,765 (GRCm39)	L484F	probably damaging	Het
Col7a1	A	G	9: 108,807,211 (GRCm39)	E2480G	unknown	Het
Dnah5	A	G	15: 28,290,341 (GRCm39)	I1244V	probably benign	Het
Dock3	G	T	9: 106,772,687 (GRCm39)	P522Q	possibly damaging	Het
Drc1	T	A	5: 30,523,857 (GRCm39)		probably null	Het
Epas1	C	T	17: 87,131,114 (GRCm39)	T298I	possibly damaging	Het
Epha1	A	T	6: 42,338,580 (GRCm39)	I699N	probably damaging	Het
Ephb3	T	C	16: 21,040,437 (GRCm39)	S558P	probably damaging	Het
Epn1	T	A	7: 5,100,165 (GRCm39)	L426*	probably null	Het
Fam234b	T	C	6: 135,202,265 (GRCm39)	V329A	probably benign	Het
Fasn	G	T	11: 120,706,950 (GRCm39)	R901S	probably damaging	Het
Fbln2	T	C	6: 91,248,830 (GRCm39)	M1165T	possibly damaging	Het
Fer1l4	T	C	2: 155,893,913 (GRCm39)	R103G	probably benign	Het
G6pd2	T	A	5: 61,966,568 (GRCm39)	D114E	probably benign	Het
Galnt10	A	G	11: 57,671,882 (GRCm39)	K391E	probably damaging	Het
Gpr150	C	A	13: 76,204,045 (GRCm39)	C300F	probably benign	Het
Hhipl2	A	G	1: 183,204,479 (GRCm39)	T151A	probably damaging	Het
Hmcn2	C	A	2: 31,347,819 (GRCm39)	L4822M	probably damaging	Het
Ifi207	T	A	1: 173,559,953 (GRCm39)	Q173L	unknown	Het
Inca1	T	C	11: 70,580,707 (GRCm39)	E86G	probably damaging	Het
Iqca1	A	G	1: 90,072,667 (GRCm39)	L71P	probably benign	Het
Kank2	G	T	9: 21,706,689 (GRCm39)	Q110K	probably damaging	Het
Katnip	A	T	7: 125,466,827 (GRCm39)	M1361L	possibly damaging	Het
Kif13b	A	T	14: 64,975,004 (GRCm39)	M407L	probably damaging	Het
Kif5a	A	C	10: 127,081,310 (GRCm39)	I208S	probably damaging	Het
Kmt2c	T	C	5: 25,489,469 (GRCm39)	K4490R	probably damaging	Het
Ltbp2	C	T	12: 84,835,875 (GRCm39)	R1352H	probably benign	Het
Macf1	T	C	4: 123,345,947 (GRCm39)	Q2061R	possibly damaging	Het
Marcks	A	G	10: 37,012,163 (GRCm39)	S291P	probably benign	Het
Mccc1	A	G	3: 36,039,231 (GRCm39)	V254A	possibly damaging	Het
Mdn1	C	T	4: 32,754,547 (GRCm39)	R4683W	probably damaging	Het
Mon2	A	G	10: 122,846,397 (GRCm39)		probably null	Het
Ndrg4	A	T	8: 96,433,421 (GRCm39)	H134L	probably damaging	Het
Nek7	C	A	1: 138,462,101 (GRCm39)		probably null	Het
Nlrc3	C	T	16: 3,771,859 (GRCm39)	S151N	probably damaging	Het
Nsl1	C	A	1: 190,802,310 (GRCm39)	A146E	probably benign	Het
Or10a3n	A	T	7: 108,493,292 (GRCm39)	F107L	probably benign	Het
Or2y1e	A	C	11: 49,218,760 (GRCm39)	N174T	probably damaging	Het
Or52ac1	A	G	7: 104,246,104 (GRCm39)	Y95H	probably benign	Het
Or5b120	T	A	19: 13,479,922 (GRCm39)	Y72N	probably damaging	Het
Or6c210	A	T	10: 129,495,907 (GRCm39)	R77S	probably benign	Het
Pde4d	A	C	13: 109,876,976 (GRCm39)	S41R	probably damaging	Het
Phlpp1	T	A	1: 106,274,862 (GRCm39)	L875*	probably null	Het
Pkd1	T	A	17: 24,799,186 (GRCm39)	S2802T	possibly damaging	Het
Polr3b	A	G	10: 84,510,454 (GRCm39)	T500A	probably benign	Het
Ppp2r2c	T	C	5: 37,097,531 (GRCm39)	V239A	probably benign	Het
Pramel11	A	G	4: 143,623,490 (GRCm39)	V228A	probably benign	Het
Reln	T	A	5: 22,104,111 (GRCm39)	I3287F	probably damaging	Het
Scube2	T	C	7: 109,407,651 (GRCm39)	D763G	probably damaging	Het
Setd5	T	C	6: 113,096,396 (GRCm39)	V534A	probably benign	Het
Slc10a4	T	A	5: 73,169,373 (GRCm39)	C333S	probably benign	Het
Slc15a1	G	A	14: 121,722,283 (GRCm39)	A206V	probably damaging	Het
Snx14	A	G	9: 88,273,829 (GRCm39)	L654P	probably damaging	Het
Sowahc	G	A	10: 59,059,012 (GRCm39)	A383T	possibly damaging	Het
Taf1b	A	G	12: 24,550,448 (GRCm39)	D11G	possibly damaging	Het
Tap1	C	T	17: 34,412,279 (GRCm39)	Q164*	probably null	Het
Tbcel	T	A	9: 42,327,168 (GRCm39)	R430W	probably damaging	Het
Trappc11	A	T	8: 47,965,594 (GRCm39)		probably null	Het
Trim15	T	C	17: 37,173,732 (GRCm39)	I259V	probably damaging	Het
Trpt1	T	C	19: 6,975,668 (GRCm39)	S141P	probably damaging	Het
Tsc2	T	A	17: 24,832,190 (GRCm39)	Q732L	probably benign	Het
Tstd3	C	A	4: 21,759,622 (GRCm39)		probably null	Het
Unc13d	T	C	11: 115,955,451 (GRCm39)	K914R	possibly damaging	Het
Uqcc2	T	A	17: 27,344,860 (GRCm39)	K62*	probably null	Het
Vim	A	G	2: 13,585,001 (GRCm39)	D394G	probably damaging	Het
Wdr47	G	A	3: 108,532,052 (GRCm39)		probably null	Het

Other mutations in Unk

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01782:Unk	APN	11	115,949,205 (GRCm39)	missense	probably benign	0.44
IGL01956:Unk	APN	11	115,947,160 (GRCm39)	missense	probably damaging	1.00
IGL02044:Unk	APN	11	115,940,154 (GRCm39)	missense	probably damaging	0.99
IGL02738:Unk	APN	11	115,947,017 (GRCm39)	missense	probably damaging	1.00
IGL02861:Unk	APN	11	115,947,125 (GRCm39)	missense	possibly damaging	0.58
legal_midget	UTSW	11	115,941,550 (GRCm39)	missense	probably damaging	1.00
produce	UTSW	11	115,942,285 (GRCm39)	missense	probably damaging	1.00
R0098:Unk	UTSW	11	115,940,995 (GRCm39)	missense	probably damaging	1.00
R0098:Unk	UTSW	11	115,940,995 (GRCm39)	missense	probably damaging	1.00
R0827:Unk	UTSW	11	115,943,935 (GRCm39)	missense	possibly damaging	0.59
R1471:Unk	UTSW	11	115,940,235 (GRCm39)	missense	probably benign	0.45
R1824:Unk	UTSW	11	115,921,268 (GRCm39)	unclassified	probably benign
R1900:Unk	UTSW	11	115,949,907 (GRCm39)	missense	probably benign	0.01
R3052:Unk	UTSW	11	115,940,949 (GRCm39)	missense	probably benign	0.01
R4033:Unk	UTSW	11	115,944,353 (GRCm39)	missense	probably benign	0.00
R4449:Unk	UTSW	11	115,944,460 (GRCm39)	missense	probably damaging	1.00
R4593:Unk	UTSW	11	115,939,882 (GRCm39)	missense	probably benign	0.02
R4847:Unk	UTSW	11	115,945,232 (GRCm39)	missense	probably damaging	1.00
R4921:Unk	UTSW	11	115,945,771 (GRCm39)	missense	probably benign
R4940:Unk	UTSW	11	115,944,491 (GRCm39)	missense	possibly damaging	0.63
R5099:Unk	UTSW	11	115,949,936 (GRCm39)	missense	probably benign	0.00
R6351:Unk	UTSW	11	115,945,772 (GRCm39)	missense	probably benign
R6387:Unk	UTSW	11	115,945,766 (GRCm39)	missense	possibly damaging	0.88
R6551:Unk	UTSW	11	115,941,550 (GRCm39)	missense	probably damaging	1.00
R6554:Unk	UTSW	11	115,942,285 (GRCm39)	missense	probably damaging	1.00
R6599:Unk	UTSW	11	115,938,628 (GRCm39)	missense	probably damaging	1.00
R6733:Unk	UTSW	11	115,941,581 (GRCm39)	missense	probably damaging	1.00
R7743:Unk	UTSW	11	115,940,262 (GRCm39)	missense	possibly damaging	0.74
R7765:Unk	UTSW	11	115,943,908 (GRCm39)	missense	probably benign	0.25
R8693:Unk	UTSW	11	115,938,640 (GRCm39)	missense	probably damaging	0.98
R9242:Unk	UTSW	11	115,940,184 (GRCm39)	missense	probably benign	0.01
R9569:Unk	UTSW	11	115,950,035 (GRCm39)	missense	probably damaging	1.00
Z1176:Unk	UTSW	11	115,938,590 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- CCTGTTTACGACATCAGGTAGG -3'
(R):5'- CAGACAGGGCAGTTTCAGTTG -3'

Sequencing Primer
(F):5'- TTACGACATCAGGTAGGCTGATGC -3'
(R):5'- AGGCAGGCAGTTTCAAGCC -3'

Posted On

2016-12-20