Mutagenetix > Incidental Mutation

Incidental Mutation 'R6645:Zmat4'

526071

Institutional Source

Beutler Lab

Gene Symbol

Zmat4

Ensembl Gene

ENSMUSG00000037492

Gene Name

zinc finger, matrin type 4

Synonyms

9630048M01Rik

MMRRC Submission

044766-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.134) question?

Stock #

R6645 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

24137347-24553133 bp(+) (GRCm39)

Type of Mutation

splice site

DNA Base Change (assembly)

G to A at 24287417 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000121337 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042352] [ENSMUST00000123412] [ENSMUST00000131410] [ENSMUST00000135747] [ENSMUST00000207301]

AlphaFold

Q8BZ94

Predicted Effect

silent
Transcript: ENSMUST00000042352

SMART Domains

Protein: ENSMUSP00000049430
Gene: ENSMUSG00000037492

Domain	Start	End	E-Value	Type
ZnF_U1	11	45	8.34e-6	SMART
ZnF_C2H2	14	38	4.99e1	SMART
ZnF_U1	72	106	8.6e-8	SMART
ZnF_C2H2	75	99	1.33e1	SMART
ZnF_U1	142	176	4.37e-9	SMART
ZnF_C2H2	145	169	4.38e1	SMART
ZnF_U1	195	229	3.08e-2	SMART
ZnF_C2H2	198	222	1.62e0	SMART

Predicted Effect

silent
Transcript: ENSMUST00000123412

SMART Domains

Protein: ENSMUSP00000121626
Gene: ENSMUSG00000037492

Domain	Start	End	E-Value	Type
ZnF_U1	11	45	8.34e-6	SMART
ZnF_C2H2	14	38	4.99e1	SMART
ZnF_U1	72	106	8.6e-8	SMART
ZnF_C2H2	75	99	1.33e1	SMART
ZnF_U1	142	176	4.37e-9	SMART
ZnF_C2H2	145	169	4.38e1	SMART
ZnF_U1	195	225	5.76e0	SMART
ZnF_C2H2	198	222	1.62e0	SMART

Predicted Effect

silent
Transcript: ENSMUST00000131410

SMART Domains

Protein: ENSMUSP00000115719
Gene: ENSMUSG00000037492

Domain	Start	End	E-Value	Type
ZnF_U1	11	45	8.34e-6	SMART
ZnF_U1	72	96	1.09e1	SMART

Predicted Effect

probably null
Transcript: ENSMUST00000135747

SMART Domains

Protein: ENSMUSP00000121337
Gene: ENSMUSG00000037492

Domain	Start	End	E-Value	Type
ZnF_U1	25	59	8.34e-6	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000207301

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.0%
20x: 93.9%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Anp32e	T	A	3: 95,844,414 (GRCm39)	F95I	probably damaging	Het
Arap1	A	G	7: 101,057,318 (GRCm39)	K628R	possibly damaging	Het
Arid4b	A	T	13: 14,294,737 (GRCm39)	E6D	probably damaging	Het
Atxn10	G	T	15: 85,260,904 (GRCm39)		probably null	Het
Ccdc170	A	G	10: 4,510,974 (GRCm39)	I678V	possibly damaging	Het
Ccdc18	T	A	5: 108,286,796 (GRCm39)	V110D	probably benign	Het
Cep85l	C	T	10: 53,177,768 (GRCm39)	E322K	probably benign	Het
Cilp	A	T	9: 65,186,587 (GRCm39)	Y894F	possibly damaging	Het
Ddx4	A	G	13: 112,777,708 (GRCm39)	S62P	possibly damaging	Het
Dph7	T	C	2: 24,855,663 (GRCm39)	V154A	probably benign	Het
Ephb6	T	C	6: 41,594,206 (GRCm39)	S579P	probably benign	Het
Fam53a	G	T	5: 33,758,128 (GRCm39)	Q332K	probably benign	Het
Fancm	A	G	12: 65,152,874 (GRCm39)	D1110G	probably damaging	Het
Fh1	A	T	1: 175,442,442 (GRCm39)	V136E	possibly damaging	Het
Greb1	G	T	12: 16,748,580 (GRCm39)	H1132Q	probably benign	Het
Jph1	A	G	1: 17,161,985 (GRCm39)	S226P	probably damaging	Het
Kbtbd8	C	T	6: 95,103,730 (GRCm39)	R460*	probably null	Het
Lama5	T	A	2: 179,821,463 (GRCm39)	N3059Y	probably damaging	Het
Lipc	G	A	9: 70,711,030 (GRCm39)	T289I	probably damaging	Het
Lrrc2	T	C	9: 110,799,175 (GRCm39)	W241R	probably damaging	Het
Mfn2	T	A	4: 147,979,069 (GRCm39)	I88F	probably damaging	Het
Mms19	G	C	19: 41,943,630 (GRCm39)	N366K	probably benign	Het
Myo15a	A	G	11: 60,368,118 (GRCm39)	T293A	probably benign	Het
Ndfip2	T	A	14: 105,529,707 (GRCm39)	Y179N	probably damaging	Het
Notch4	A	G	17: 34,806,790 (GRCm39)	D1909G	probably benign	Het
Obscn	C	T	11: 58,976,088 (GRCm39)	S2013N	probably damaging	Het
Oca2	G	T	7: 55,964,522 (GRCm39)	A357S	probably benign	Het
Or8b43	T	C	9: 38,360,219 (GRCm39)	L17S	probably damaging	Het
Or8g35	T	A	9: 39,381,562 (GRCm39)	L153F	probably benign	Het
Pde7b	C	A	10: 20,486,312 (GRCm39)		probably null	Het
Ppef2	T	C	5: 92,378,320 (GRCm39)	N625S	probably benign	Het
Prom1	A	T	5: 44,204,856 (GRCm39)	L192Q	probably damaging	Het
Satb2	T	C	1: 56,836,166 (GRCm39)	I542V	possibly damaging	Het
Sgpp2	C	T	1: 78,336,799 (GRCm39)	T59M	probably damaging	Het
Skint6	T	C	4: 112,749,235 (GRCm39)	T782A	possibly damaging	Het
Slc13a4	G	T	6: 35,245,774 (GRCm39)	Q624K	probably benign	Het
Slc9a3	T	A	13: 74,312,291 (GRCm39)	H629Q	probably damaging	Het
Slitrk3	G	T	3: 72,957,194 (GRCm39)	A526E	probably benign	Het
Spata31e2	T	A	1: 26,722,198 (GRCm39)	D994V	probably benign	Het
Sptssa	T	C	12: 54,693,275 (GRCm39)	Y53C	probably damaging	Het
Srsf10	T	C	4: 135,590,874 (GRCm39)	S159P	possibly damaging	Het
Tbce	T	C	13: 14,179,814 (GRCm39)	T341A	probably benign	Het
Tdrd6	A	G	17: 43,935,423 (GRCm39)	L1875P	probably benign	Het
Tkt	G	A	14: 30,292,168 (GRCm39)	G425R	probably damaging	Het
Tmprss7	T	C	16: 45,511,326 (GRCm39)	I17M	possibly damaging	Het
Ttc21b	T	C	2: 66,066,721 (GRCm39)	S311G	probably benign	Het
Ubr5	A	G	15: 38,029,750 (GRCm39)	Y492H	probably damaging	Het
Ush2a	T	C	1: 188,255,528 (GRCm39)	I1535T	probably damaging	Het
Vmn2r17	A	T	5: 109,576,247 (GRCm39)	N373Y	probably damaging	Het
Vmn2r6	A	T	3: 64,464,297 (GRCm39)	V179E	probably damaging	Het
Vps13b	A	G	15: 35,910,451 (GRCm39)	E3405G	probably benign	Het
Wac	A	T	18: 7,973,523 (GRCm39)	Q212H	probably damaging	Het
Washc4	C	T	10: 83,408,059 (GRCm39)	R555*	probably null	Het

Other mutations in Zmat4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01317:Zmat4	APN	8	24,392,185 (GRCm39)	missense	probably benign	0.00
IGL01678:Zmat4	APN	8	24,392,064 (GRCm39)	missense	probably damaging	1.00
IGL02528:Zmat4	APN	8	24,505,212 (GRCm39)	missense	probably damaging	0.99
IGL02638:Zmat4	APN	8	24,287,389 (GRCm39)	missense	probably damaging	1.00
IGL03203:Zmat4	APN	8	24,505,200 (GRCm39)	missense	probably damaging	0.99
R0208:Zmat4	UTSW	8	24,392,083 (GRCm39)	missense	probably damaging	1.00
R0884:Zmat4	UTSW	8	24,505,143 (GRCm39)	missense	probably benign	0.00
R1856:Zmat4	UTSW	8	24,419,151 (GRCm39)	missense	probably benign	0.41
R1888:Zmat4	UTSW	8	24,505,177 (GRCm39)	missense	probably damaging	0.99
R1888:Zmat4	UTSW	8	24,505,177 (GRCm39)	missense	probably damaging	0.99
R2166:Zmat4	UTSW	8	24,392,152 (GRCm39)	missense	probably damaging	1.00
R3704:Zmat4	UTSW	8	24,287,430 (GRCm39)	missense	probably benign	0.18
R4966:Zmat4	UTSW	8	24,392,085 (GRCm39)	missense	probably damaging	1.00
R5063:Zmat4	UTSW	8	24,238,457 (GRCm39)	missense	probably damaging	0.97
R5536:Zmat4	UTSW	8	24,238,508 (GRCm39)	missense	probably damaging	1.00
R5990:Zmat4	UTSW	8	24,419,279 (GRCm39)	missense	probably damaging	1.00
R6191:Zmat4	UTSW	8	24,392,083 (GRCm39)	missense	probably damaging	1.00
R6962:Zmat4	UTSW	8	24,392,181 (GRCm39)	missense	probably benign	0.00
R7944:Zmat4	UTSW	8	24,238,436 (GRCm39)	missense	possibly damaging	0.95
R7945:Zmat4	UTSW	8	24,238,436 (GRCm39)	missense	possibly damaging	0.95
R8536:Zmat4	UTSW	8	24,238,523 (GRCm39)	critical splice donor site	probably null
R9182:Zmat4	UTSW	8	24,419,226 (GRCm39)	missense	probably damaging	1.00
R9718:Zmat4	UTSW	8	24,238,507 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ACTTCCATGGAATTTTCAGGAGC -3'
(R):5'- AGCAGGTTCCCGTAGAAAGG -3'

Sequencing Primer
(F):5'- TCCATGGAATTTTCAGGAGCACAAG -3'
(R):5'- TCCCGTAGAAAGGAAAAGGCCATC -3'

Posted On

2018-06-22