Incidental Mutation 'IGL02450:Or13a19'
| ID |
294138 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or13a19
|
| Ensembl Gene |
ENSMUSG00000061489 |
| Gene Name |
olfactory receptor family 13 subfamily A member 19 |
| Synonyms |
Olfr525, MOR251-2, GA_x6K02T2PBJ9-42472898-42473827 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.069)
|
| Stock # |
IGL02450
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
139902614-139903543 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to G
at 139903140 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Histidine to Arginine
at position 176
(H176R)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149361
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000078103]
[ENSMUST00000214594]
|
| AlphaFold |
Q8VGL5 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000078103
AA Change: H176R
PolyPhen 2
Score 0.947 (Sensitivity: 0.79; Specificity: 0.95)
|
| SMART Domains |
Protein: ENSMUSP00000077243
Gene: ENSMUSG00000061489
AA Change: H176R
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
307 |
1.1e-53 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
260 |
1.5e-5 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.3e-26 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000214594
AA Change: H176R
PolyPhen 2
Score 0.947 (Sensitivity: 0.79; Specificity: 0.95)
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000215542
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aco2 |
A |
G |
15: 81,798,963 (GRCm39) |
*781W |
probably null |
Het |
| Adamts16 |
C |
A |
13: 70,984,419 (GRCm39) |
R81S |
probably damaging |
Het |
| Aldh1l1 |
A |
G |
6: 90,546,855 (GRCm39) |
D386G |
probably benign |
Het |
| Anxa6 |
G |
A |
11: 54,885,767 (GRCm39) |
R393W |
probably damaging |
Het |
| Bdnf |
G |
A |
2: 109,553,949 (GRCm39) |
V108I |
possibly damaging |
Het |
| Bpgm |
C |
T |
6: 34,464,399 (GRCm39) |
R39W |
probably damaging |
Het |
| Cd101 |
T |
C |
3: 100,901,054 (GRCm39) |
E1006G |
probably damaging |
Het |
| Cd109 |
A |
T |
9: 78,603,132 (GRCm39) |
E972V |
possibly damaging |
Het |
| Cdhr3 |
T |
A |
12: 33,132,224 (GRCm39) |
Q133L |
probably benign |
Het |
| Cdk5r1 |
C |
T |
11: 80,368,666 (GRCm39) |
A111V |
probably benign |
Het |
| Cnga4 |
A |
T |
7: 105,054,955 (GRCm39) |
I77F |
probably damaging |
Het |
| Egfem1 |
G |
A |
3: 29,711,417 (GRCm39) |
|
probably null |
Het |
| Fbxl21 |
T |
A |
13: 56,674,766 (GRCm39) |
V39D |
possibly damaging |
Het |
| Gimap6 |
T |
C |
6: 48,681,351 (GRCm39) |
I94M |
probably benign |
Het |
| Glis1 |
T |
C |
4: 107,484,726 (GRCm39) |
V407A |
probably benign |
Het |
| Gm5784 |
C |
T |
12: 19,437,970 (GRCm39) |
|
noncoding transcript |
Het |
| Gm9839 |
A |
T |
1: 32,559,964 (GRCm39) |
|
probably benign |
Het |
| Heatr5a |
T |
A |
12: 51,992,213 (GRCm39) |
M566L |
probably benign |
Het |
| Jph1 |
G |
A |
1: 17,074,201 (GRCm39) |
P606S |
possibly damaging |
Het |
| Jup |
C |
T |
11: 100,269,183 (GRCm39) |
C410Y |
probably damaging |
Het |
| Kif23 |
A |
G |
9: 61,831,239 (GRCm39) |
M777T |
probably benign |
Het |
| Lifr |
G |
T |
15: 7,220,246 (GRCm39) |
D959Y |
probably damaging |
Het |
| Lsm1 |
C |
A |
8: 26,283,806 (GRCm39) |
L73I |
possibly damaging |
Het |
| Maneal |
G |
A |
4: 124,750,928 (GRCm39) |
A276V |
probably benign |
Het |
| Myh4 |
A |
G |
11: 67,142,635 (GRCm39) |
D932G |
probably damaging |
Het |
| Nipbl |
C |
T |
15: 8,373,058 (GRCm39) |
V1063M |
probably damaging |
Het |
| Nlrx1 |
A |
G |
9: 44,164,798 (GRCm39) |
V882A |
probably benign |
Het |
| Obox6 |
A |
G |
7: 15,567,638 (GRCm39) |
C270R |
probably damaging |
Het |
| Pard3b |
A |
G |
1: 62,571,835 (GRCm39) |
I925V |
possibly damaging |
Het |
| Pdhx |
A |
G |
2: 102,872,594 (GRCm39) |
S163P |
probably benign |
Het |
| Pdzrn3 |
T |
C |
6: 101,331,461 (GRCm39) |
D271G |
probably damaging |
Het |
| Plec |
A |
G |
15: 76,075,515 (GRCm39) |
I399T |
probably damaging |
Het |
| Pthlh |
T |
G |
6: 147,158,666 (GRCm39) |
D98A |
possibly damaging |
Het |
| Spata31f3 |
A |
G |
4: 42,874,127 (GRCm39) |
S14P |
probably benign |
Het |
| Spock3 |
T |
A |
8: 63,698,249 (GRCm39) |
|
probably null |
Het |
| Tgtp2 |
C |
T |
11: 48,950,317 (GRCm39) |
G85D |
probably benign |
Het |
| Tmem94 |
A |
G |
11: 115,683,897 (GRCm39) |
D739G |
probably damaging |
Het |
| Washc5 |
G |
A |
15: 59,204,166 (GRCm39) |
R706* |
probably null |
Het |
| Zfp13 |
C |
T |
17: 23,795,072 (GRCm39) |
A493T |
probably benign |
Het |
| Zscan20 |
G |
T |
4: 128,480,450 (GRCm39) |
D680E |
probably damaging |
Het |
|
| Other mutations in Or13a19 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02143:Or13a19
|
APN |
7 |
139,903,505 (GRCm39) |
nonsense |
probably null |
|
|
IGL02927:Or13a19
|
APN |
7 |
139,902,654 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03008:Or13a19
|
APN |
7 |
139,903,445 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03202:Or13a19
|
APN |
7 |
139,903,019 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R0268:Or13a19
|
UTSW |
7 |
139,903,068 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R0612:Or13a19
|
UTSW |
7 |
139,903,101 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
R0751:Or13a19
|
UTSW |
7 |
139,903,238 (GRCm39) |
missense |
probably benign |
|
|
R0801:Or13a19
|
UTSW |
7 |
139,902,831 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0940:Or13a19
|
UTSW |
7 |
139,903,065 (GRCm39) |
missense |
probably benign |
0.01 |
|
R2220:Or13a19
|
UTSW |
7 |
139,903,484 (GRCm39) |
missense |
probably benign |
0.03 |
|
R3748:Or13a19
|
UTSW |
7 |
139,903,041 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R4660:Or13a19
|
UTSW |
7 |
139,903,325 (GRCm39) |
missense |
possibly damaging |
0.67 |
|
R4683:Or13a19
|
UTSW |
7 |
139,902,681 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4887:Or13a19
|
UTSW |
7 |
139,903,014 (GRCm39) |
missense |
probably benign |
|
|
R4919:Or13a19
|
UTSW |
7 |
139,903,427 (GRCm39) |
nonsense |
probably null |
|
|
R5097:Or13a19
|
UTSW |
7 |
139,903,008 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5836:Or13a19
|
UTSW |
7 |
139,902,827 (GRCm39) |
missense |
probably benign |
|
|
R7024:Or13a19
|
UTSW |
7 |
139,902,759 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R8242:Or13a19
|
UTSW |
7 |
139,902,696 (GRCm39) |
nonsense |
probably null |
|
|
R8390:Or13a19
|
UTSW |
7 |
139,903,027 (GRCm39) |
missense |
possibly damaging |
0.56 |
|
R8739:Or13a19
|
UTSW |
7 |
139,902,647 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8813:Or13a19
|
UTSW |
7 |
139,902,793 (GRCm39) |
nonsense |
probably null |
|
|
R8876:Or13a19
|
UTSW |
7 |
139,902,716 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8988:Or13a19
|
UTSW |
7 |
139,902,938 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R9044:Or13a19
|
UTSW |
7 |
139,902,485 (GRCm39) |
splice site |
probably benign |
|
|
R9176:Or13a19
|
UTSW |
7 |
139,903,121 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9626:Or13a19
|
UTSW |
7 |
139,903,236 (GRCm39) |
missense |
probably benign |
0.06 |
|
| Posted On |
2015-04-16 |
Incidental Mutation