Incidental Mutation 'IGL03132:Abtb1'
ID |
410381 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Abtb1
|
Ensembl Gene |
ENSMUSG00000030083 |
Gene Name |
ankyrin repeat and BTB domain containing 1 |
Synonyms |
EF1ABP, BPOZ |
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.326)
|
Stock # |
IGL03132
|
Quality Score |
|
Status
|
|
Chromosome |
6 |
Chromosomal Location |
88812896-88818966 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
G to A
at 88815941 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Arginine to Cysteine
at position 177
(R177C)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000032169
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000032169]
[ENSMUST00000038409]
[ENSMUST00000061262]
[ENSMUST00000145944]
[ENSMUST00000205082]
[ENSMUST00000204327]
[ENSMUST00000204458]
[ENSMUST00000203864]
[ENSMUST00000203137]
[ENSMUST00000204932]
[ENSMUST00000203272]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000032169
AA Change: R177C
PolyPhen 2
Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
|
SMART Domains |
Protein: ENSMUSP00000032169 Gene: ENSMUSG00000030083 AA Change: R177C
Domain | Start | End | E-Value | Type |
ANK
|
1 |
31 |
5.03e2 |
SMART |
ANK
|
35 |
64 |
2.81e-4 |
SMART |
BTB
|
115 |
212 |
7.8e-18 |
SMART |
BTB
|
272 |
376 |
4.24e-19 |
SMART |
low complexity region
|
412 |
433 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000038409
|
SMART Domains |
Protein: ENSMUSP00000040417 Gene: ENSMUSG00000033152
Domain | Start | End | E-Value | Type |
coiled coil region
|
88 |
125 |
N/A |
INTRINSIC |
low complexity region
|
132 |
152 |
N/A |
INTRINSIC |
Pfam:CD34_antigen
|
328 |
539 |
9e-77 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000061262
|
SMART Domains |
Protein: ENSMUSP00000058985 Gene: ENSMUSG00000033152
Domain | Start | End | E-Value | Type |
coiled coil region
|
88 |
125 |
N/A |
INTRINSIC |
low complexity region
|
132 |
152 |
N/A |
INTRINSIC |
Pfam:CD34_antigen
|
328 |
539 |
5.4e-70 |
PFAM |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124562
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000141401
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000145944
|
SMART Domains |
Protein: ENSMUSP00000117954 Gene: ENSMUSG00000033152
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
28 |
N/A |
INTRINSIC |
low complexity region
|
39 |
57 |
N/A |
INTRINSIC |
coiled coil region
|
152 |
189 |
N/A |
INTRINSIC |
low complexity region
|
196 |
216 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000147542
|
Predicted Effect |
unknown
Transcript: ENSMUST00000205082
AA Change: P38L
|
Predicted Effect |
unknown
Transcript: ENSMUST00000204327
AA Change: P13L
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000204458
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000203864
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000203137
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000203514
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000204932
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000204560
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000203272
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000203460
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000203120
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein with an ankyrin repeat region and two BTB/POZ domains, which are thought to be involved in protein-protein interactions. Expression of this gene is activated by the phosphatase and tensin homolog, a tumor suppressor. Alternate splicing results in three transcript variants. [provided by RefSeq, Mar 2010]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 29 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Adam21 |
C |
A |
12: 81,607,148 (GRCm39) |
G205* |
probably null |
Het |
Baz2b |
T |
A |
2: 59,738,097 (GRCm39) |
|
probably benign |
Het |
Col6a3 |
C |
T |
1: 90,731,615 (GRCm39) |
G939D |
probably damaging |
Het |
Csf1r |
A |
G |
18: 61,261,171 (GRCm39) |
E749G |
probably benign |
Het |
Dnm3 |
C |
T |
1: 161,838,674 (GRCm39) |
|
probably null |
Het |
Dsg3 |
A |
G |
18: 20,657,653 (GRCm39) |
D241G |
probably damaging |
Het |
Dst |
T |
C |
1: 34,295,722 (GRCm39) |
S6015P |
probably benign |
Het |
Dvl2 |
T |
C |
11: 69,896,514 (GRCm39) |
S183P |
probably benign |
Het |
Exoc6b |
T |
C |
6: 84,768,246 (GRCm39) |
N699S |
possibly damaging |
Het |
Fat2 |
T |
C |
11: 55,144,746 (GRCm39) |
R4043G |
probably benign |
Het |
Gbp9 |
T |
A |
5: 105,232,819 (GRCm39) |
T278S |
possibly damaging |
Het |
Gm2a |
T |
A |
11: 54,994,474 (GRCm39) |
I48N |
probably damaging |
Het |
Gorasp2 |
T |
C |
2: 70,514,379 (GRCm39) |
V232A |
probably benign |
Het |
Gpa33 |
G |
A |
1: 165,980,218 (GRCm39) |
D94N |
probably benign |
Het |
Il1rap |
A |
T |
16: 26,498,869 (GRCm39) |
S123C |
probably damaging |
Het |
Kctd17 |
T |
C |
15: 78,319,887 (GRCm39) |
S102P |
probably damaging |
Het |
Lamb1 |
A |
G |
12: 31,350,333 (GRCm39) |
|
probably null |
Het |
Mfsd1 |
T |
A |
3: 67,495,273 (GRCm39) |
I131K |
possibly damaging |
Het |
Pkhd1l1 |
G |
A |
15: 44,438,013 (GRCm39) |
C3576Y |
probably damaging |
Het |
Pla2g4a |
A |
T |
1: 149,778,035 (GRCm39) |
|
probably benign |
Het |
Ptpn11 |
T |
A |
5: 121,272,878 (GRCm39) |
D575V |
possibly damaging |
Het |
Reck |
A |
T |
4: 43,938,898 (GRCm39) |
R755* |
probably null |
Het |
Scgb2b21 |
A |
G |
7: 33,219,299 (GRCm39) |
V35A |
possibly damaging |
Het |
Srpra |
G |
A |
9: 35,125,574 (GRCm39) |
|
probably null |
Het |
Stk11ip |
T |
C |
1: 75,512,733 (GRCm39) |
S1025P |
probably benign |
Het |
Tmprss9 |
G |
A |
10: 80,730,699 (GRCm39) |
V742M |
probably damaging |
Het |
Trh |
T |
C |
6: 92,220,755 (GRCm39) |
T36A |
probably benign |
Het |
Trim35 |
A |
G |
14: 66,546,595 (GRCm39) |
E454G |
probably damaging |
Het |
Vmn2r99 |
C |
T |
17: 19,598,485 (GRCm39) |
Q170* |
probably null |
Het |
|
Other mutations in Abtb1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01487:Abtb1
|
APN |
6 |
88,816,431 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02264:Abtb1
|
APN |
6 |
88,813,517 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02376:Abtb1
|
APN |
6 |
88,815,466 (GRCm39) |
splice site |
probably benign |
|
IGL02702:Abtb1
|
APN |
6 |
88,815,120 (GRCm39) |
missense |
probably benign |
|
IGL03266:Abtb1
|
APN |
6 |
88,815,916 (GRCm39) |
missense |
probably damaging |
0.97 |
PIT4243001:Abtb1
|
UTSW |
6 |
88,815,708 (GRCm39) |
missense |
probably benign |
0.16 |
PIT4418001:Abtb1
|
UTSW |
6 |
88,816,630 (GRCm39) |
missense |
possibly damaging |
0.78 |
R0331:Abtb1
|
UTSW |
6 |
88,817,684 (GRCm39) |
unclassified |
probably benign |
|
R0763:Abtb1
|
UTSW |
6 |
88,815,261 (GRCm39) |
missense |
probably damaging |
0.96 |
R1565:Abtb1
|
UTSW |
6 |
88,813,536 (GRCm39) |
missense |
probably benign |
0.03 |
R1796:Abtb1
|
UTSW |
6 |
88,813,601 (GRCm39) |
missense |
possibly damaging |
0.68 |
R1822:Abtb1
|
UTSW |
6 |
88,813,536 (GRCm39) |
missense |
probably benign |
0.03 |
R1824:Abtb1
|
UTSW |
6 |
88,813,536 (GRCm39) |
missense |
probably benign |
0.03 |
R2225:Abtb1
|
UTSW |
6 |
88,813,349 (GRCm39) |
missense |
probably damaging |
1.00 |
R2227:Abtb1
|
UTSW |
6 |
88,813,349 (GRCm39) |
missense |
probably damaging |
1.00 |
R2399:Abtb1
|
UTSW |
6 |
88,815,720 (GRCm39) |
missense |
possibly damaging |
0.89 |
R4394:Abtb1
|
UTSW |
6 |
88,813,566 (GRCm39) |
missense |
probably damaging |
0.96 |
R4625:Abtb1
|
UTSW |
6 |
88,813,269 (GRCm39) |
missense |
probably benign |
0.00 |
R5312:Abtb1
|
UTSW |
6 |
88,815,240 (GRCm39) |
missense |
probably damaging |
1.00 |
R5552:Abtb1
|
UTSW |
6 |
88,813,530 (GRCm39) |
missense |
probably benign |
0.04 |
R6035:Abtb1
|
UTSW |
6 |
88,818,788 (GRCm39) |
missense |
probably damaging |
1.00 |
R6035:Abtb1
|
UTSW |
6 |
88,818,788 (GRCm39) |
missense |
probably damaging |
1.00 |
R6092:Abtb1
|
UTSW |
6 |
88,815,433 (GRCm39) |
missense |
probably benign |
|
R6195:Abtb1
|
UTSW |
6 |
88,817,718 (GRCm39) |
missense |
probably benign |
0.04 |
R7257:Abtb1
|
UTSW |
6 |
88,816,434 (GRCm39) |
missense |
probably benign |
0.01 |
R9547:Abtb1
|
UTSW |
6 |
88,815,917 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2016-08-02 |