Incidental Mutation 'IGL03281:Selenbp1'
ID 415600
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Selenbp1
Ensembl Gene ENSMUSG00000068874
Gene Name selenium binding protein 1
Synonyms Lp56, Lpsb
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL03281
Quality Score
Status
Chromosome 3
Chromosomal Location 94840394-94852069 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) A to T at 94844621 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Stop codon at position 93 (K93*)
Ref Sequence ENSEMBL: ENSMUSP00000118563 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000090839] [ENSMUST00000134202] [ENSMUST00000140757]
AlphaFold P17563
Predicted Effect probably null
Transcript: ENSMUST00000090839
AA Change: K93*
SMART Domains Protein: ENSMUSP00000088349
Gene: ENSMUSG00000068874
AA Change: K93*

DomainStartEndE-ValueType
Pfam:SBP56 6 472 3.2e-225 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000134202
AA Change: K93*
SMART Domains Protein: ENSMUSP00000120159
Gene: ENSMUSG00000068874
AA Change: K93*

DomainStartEndE-ValueType
Pfam:SBP56 6 123 4.7e-56 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000139949
Predicted Effect probably null
Transcript: ENSMUST00000140757
AA Change: K93*
SMART Domains Protein: ENSMUSP00000118563
Gene: ENSMUSG00000068874
AA Change: K93*

DomainStartEndE-ValueType
Pfam:SBP56 6 123 4.7e-56 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000145551
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit sex-specific changes in organ weights. Mice homozygous for a different allele lack methanethiol oxidase activity and exhibit an increase in dimethylsulfide and dimethyl-sulfone serum levels. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 26 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2810021J22Rik G A 11: 58,771,601 (GRCm39) R361H probably benign Het
Abcd2 G T 15: 91,035,876 (GRCm39) T663K probably damaging Het
Btbd8 A T 5: 107,651,742 (GRCm39) T212S probably benign Het
Bud23 C T 5: 135,092,741 (GRCm39) R28H probably benign Het
Celsr2 T C 3: 108,320,256 (GRCm39) Y852C probably damaging Het
Dll1 C A 17: 15,593,866 (GRCm39) R167L probably benign Het
Hmgxb4 A G 8: 75,750,790 (GRCm39) T538A probably damaging Het
Hrh4 T C 18: 13,155,526 (GRCm39) V355A possibly damaging Het
Hrnr A T 3: 93,230,158 (GRCm39) E132V probably benign Het
Ighv7-1 A T 12: 113,860,571 (GRCm39) probably benign Het
Kcnu1 A T 8: 26,382,105 (GRCm39) Q485L probably null Het
Lrp1b T A 2: 40,615,526 (GRCm39) M3626L probably benign Het
Magea6 G T X: 153,707,623 (GRCm39) C144* probably null Het
Map1a G T 2: 121,135,541 (GRCm39) R1881L probably damaging Het
Naip2 T A 13: 100,298,128 (GRCm39) Y636F probably damaging Het
Or12j5 T A 7: 140,083,713 (GRCm39) I220F probably damaging Het
Or6c2 T A 10: 129,362,272 (GRCm39) F59I probably benign Het
Prg4 A G 1: 150,325,839 (GRCm39) probably benign Het
Ptpn4 T G 1: 119,587,642 (GRCm39) Q900H probably damaging Het
Ralgps1 A G 2: 33,062,428 (GRCm39) probably null Het
Rasgrp4 C T 7: 28,845,450 (GRCm39) A381V possibly damaging Het
Skint5 T A 4: 113,524,415 (GRCm39) K855N unknown Het
Tssk4 T C 14: 55,887,885 (GRCm39) V27A possibly damaging Het
Ttc39a C A 4: 109,290,219 (GRCm39) Q310K possibly damaging Het
Utp18 C T 11: 93,766,784 (GRCm39) V276I probably damaging Het
Vmn2r45 C A 7: 8,486,603 (GRCm39) L228F probably damaging Het
Other mutations in Selenbp1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01970:Selenbp1 APN 3 94,844,313 (GRCm39) missense probably benign 0.24
PIT4131001:Selenbp1 UTSW 3 94,844,607 (GRCm39) missense probably damaging 0.99
R0415:Selenbp1 UTSW 3 94,844,224 (GRCm39) missense possibly damaging 0.61
R1132:Selenbp1 UTSW 3 94,844,644 (GRCm39) missense probably benign 0.02
R1421:Selenbp1 UTSW 3 94,851,183 (GRCm39) missense probably benign
R1522:Selenbp1 UTSW 3 94,844,669 (GRCm39) missense probably damaging 1.00
R1676:Selenbp1 UTSW 3 94,851,854 (GRCm39) missense probably damaging 1.00
R1701:Selenbp1 UTSW 3 94,844,701 (GRCm39) missense probably damaging 1.00
R2152:Selenbp1 UTSW 3 94,851,441 (GRCm39) missense probably damaging 1.00
R3033:Selenbp1 UTSW 3 94,845,351 (GRCm39) missense probably benign 0.22
R4363:Selenbp1 UTSW 3 94,850,060 (GRCm39) splice site probably null
R4631:Selenbp1 UTSW 3 94,851,879 (GRCm39) makesense probably null
R4798:Selenbp1 UTSW 3 94,851,211 (GRCm39) missense probably benign 0.27
R4935:Selenbp1 UTSW 3 94,845,269 (GRCm39) missense probably benign 0.10
R5464:Selenbp1 UTSW 3 94,851,727 (GRCm39) missense probably benign
R6253:Selenbp1 UTSW 3 94,851,157 (GRCm39) missense possibly damaging 0.95
R6314:Selenbp1 UTSW 3 94,844,576 (GRCm39) missense probably damaging 1.00
R7199:Selenbp1 UTSW 3 94,851,745 (GRCm39) missense possibly damaging 0.79
R7330:Selenbp1 UTSW 3 94,847,021 (GRCm39) missense probably benign
R7637:Selenbp1 UTSW 3 94,844,659 (GRCm39) nonsense probably null
R7658:Selenbp1 UTSW 3 94,851,413 (GRCm39) missense probably benign 0.03
R8739:Selenbp1 UTSW 3 94,844,601 (GRCm39) missense probably damaging 0.99
R8803:Selenbp1 UTSW 3 94,851,821 (GRCm39) missense possibly damaging 0.88
R8987:Selenbp1 UTSW 3 94,847,425 (GRCm39) missense probably benign 0.10
R9145:Selenbp1 UTSW 3 94,851,414 (GRCm39) missense probably benign 0.38
R9209:Selenbp1 UTSW 3 94,847,079 (GRCm39) missense probably benign 0.08
R9747:Selenbp1 UTSW 3 94,844,648 (GRCm39) missense probably damaging 0.99
Posted On 2016-08-02