Mutagenetix > Incidental Mutation

Incidental Mutation 'R1981:Fezf2'

222387

Institutional Source

Beutler Lab

Gene Symbol

Fezf2

Ensembl Gene

ENSMUSG00000021743

Gene Name

Fez family zinc finger 2

Synonyms

Fez, forebrain embryonic zinc finger, Zfp312, Fezl

MMRRC Submission

039993-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.841) question?

Stock #

R1981 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

10121574-10127669 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 12344405 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Proline to Threonine at position 261 (P261T)

Ref Sequence

ENSEMBL: ENSMUSP00000153090 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000022262] [ENSMUST00000224023] [ENSMUST00000224714]

AlphaFold

Q9ESP5

Predicted Effect

probably benign
Transcript: ENSMUST00000022262
AA Change: P261T

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000022262
Gene: ENSMUSG00000021743
AA Change: P261T

Domain	Start	End	E-Value	Type
low complexity region	41	55	N/A	INTRINSIC
low complexity region	101	120	N/A	INTRINSIC
ZnF_C2H2	272	294	1.58e-3	SMART
ZnF_C2H2	300	322	3.39e-3	SMART
ZnF_C2H2	328	350	2.79e-4	SMART
ZnF_C2H2	356	378	2.57e-3	SMART
ZnF_C2H2	384	406	1.45e-2	SMART
ZnF_C2H2	412	435	1.92e-2	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000224023
AA Change: P261T

PolyPhen 2 Score 0.002 (Sensitivity: 0.99; Specificity: 0.30)

Predicted Effect

probably benign
Transcript: ENSMUST00000224714
AA Change: P261T

PolyPhen 2 Score 0.039 (Sensitivity: 0.94; Specificity: 0.83)

Meta Mutation Damage Score

0.0818

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 96.9%
20x: 94.6%

Validation Efficiency

99% (80/81)

MGI Phenotype

PHENOTYPE: Homozygotes for a null allele show hyperactivity, altered feeding behavior leading to delayed growth and premature death, and impaired formation of subplate neurons and thalamocortical projections. Homozygotes for another allele lack a corpus callosum and show severe subcortical projection defects. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 80 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Anks1	T	C	17: 28,204,095 (GRCm39)	V181A	probably damaging	Het
Aqp4	T	C	18: 15,526,608 (GRCm39)	D291G	probably damaging	Het
Atad1	G	T	19: 32,673,210 (GRCm39)	D224E	probably benign	Het
Atp1a3	T	G	7: 24,700,400 (GRCm39)	E33A	probably benign	Het
Baz2b	A	G	2: 59,754,024 (GRCm39)	F1100L	possibly damaging	Het
Car7	C	T	8: 105,275,009 (GRCm39)		probably benign	Het
Casp8	C	A	1: 58,868,121 (GRCm39)		probably null	Het
Cdh23	A	T	10: 60,214,530 (GRCm39)	L1495H	probably damaging	Het
Ceacam9	T	G	7: 16,459,232 (GRCm39)	L177R	probably benign	Het
Col16a1	C	G	4: 129,959,236 (GRCm39)	P346A	unknown	Het
Cyp2c29	A	G	19: 39,296,216 (GRCm39)		probably null	Het
Cyp3a13	T	C	5: 137,910,118 (GRCm39)	S139G	probably damaging	Het
Dapk2	A	G	9: 66,176,180 (GRCm39)	H327R	probably benign	Het
Ddx19b	T	C	8: 111,735,975 (GRCm39)	T357A	possibly damaging	Het
Dnah2	A	G	11: 69,365,151 (GRCm39)	Y1944H	probably damaging	Het
Dnai2	T	A	11: 114,623,755 (GRCm39)	V6E	probably damaging	Het
Eipr1	T	C	12: 28,913,024 (GRCm39)	Y242H	probably damaging	Het
Fam149a	T	G	8: 45,834,778 (GRCm39)	D7A	probably damaging	Het
Fam217a	T	A	13: 35,100,737 (GRCm39)	D140V	probably benign	Het
Fat4	G	A	3: 39,045,813 (GRCm39)	C3944Y	probably damaging	Het
Gcsam	A	T	16: 45,440,337 (GRCm39)	T127S	probably damaging	Het
Git2	C	T	5: 114,887,620 (GRCm39)		probably benign	Het
Gm1527	T	C	3: 28,969,984 (GRCm39)		probably null	Het
Gtf3c1	A	G	7: 125,243,444 (GRCm39)	L1720P	possibly damaging	Het
H2-T9	T	A	17: 36,439,614 (GRCm39)	D122V	probably damaging	Het
Hat1	A	G	2: 71,220,321 (GRCm39)	T28A	probably benign	Het
Igf2r	G	A	17: 12,952,790 (GRCm39)	Q219*	probably null	Het
Impdh1	T	A	6: 29,206,450 (GRCm39)	D129V	possibly damaging	Het
Kcnh8	GAGACCAACGAGCAGCTGATGCTTCAGA	GAGA	17: 53,032,934 (GRCm39)	74	probably benign	Het
Ltbp3	A	G	19: 5,808,107 (GRCm39)	Q1250R	probably benign	Het
Mansc4	T	A	6: 146,977,173 (GRCm39)	I148F	probably benign	Het
Mast2	T	C	4: 116,172,037 (GRCm39)	Y569C	probably damaging	Het
Mcoln3	A	T	3: 145,846,345 (GRCm39)	K552*	probably null	Het
Mctp2	T	C	7: 71,814,446 (GRCm39)	Q601R	probably benign	Het
Mei1	A	G	15: 81,987,513 (GRCm39)	N859S	probably benign	Het
Myo19	A	T	11: 84,782,996 (GRCm39)	Q170L	possibly damaging	Het
Myo1h	T	C	5: 114,491,898 (GRCm39)	F676S	probably damaging	Het
Myo9a	A	G	9: 59,801,429 (GRCm39)	T1876A	probably benign	Het
Nav3	G	T	10: 109,554,951 (GRCm39)		probably benign	Het
Ndor1	T	C	2: 25,145,236 (GRCm39)	Y43C	probably damaging	Het
Nlrp1a	A	G	11: 70,989,764 (GRCm39)	V1102A	probably damaging	Het
Nmnat3	T	C	9: 98,292,352 (GRCm39)	I199T	possibly damaging	Het
Nsun7	T	C	5: 66,418,557 (GRCm39)	S96P	probably damaging	Het
Ntng1	A	G	3: 109,842,326 (GRCm39)	V149A	possibly damaging	Het
Oas3	T	C	5: 120,899,900 (GRCm39)		probably benign	Het
Or10v9	T	G	19: 11,832,371 (GRCm39)	Q315H	possibly damaging	Het
Or4k47	T	A	2: 111,451,586 (GRCm39)	I278F	probably benign	Het
Or5bw2	A	G	7: 6,573,557 (GRCm39)	D189G	probably benign	Het
Or6z7	T	C	7: 6,483,931 (GRCm39)	M75V	probably benign	Het
Or8b3	T	C	9: 38,315,031 (GRCm39)	L287P	probably damaging	Het
Or8k53	A	T	2: 86,177,486 (GRCm39)	I208N	possibly damaging	Het
Pax2	G	A	19: 44,806,904 (GRCm39)	D301N	probably damaging	Het
Pcsk4	T	A	10: 80,161,613 (GRCm39)	E176V	probably damaging	Het
Pkhd1	G	A	1: 20,187,284 (GRCm39)	P3675S	probably benign	Het
Plekho2	A	T	9: 65,465,974 (GRCm39)	L138Q	probably damaging	Het
Ppp4r3c1	A	T	X: 88,975,051 (GRCm39)	V382E	probably damaging	Het
Prkcsh	A	G	9: 21,924,164 (GRCm39)	D458G	probably damaging	Het
Prr11	T	A	11: 86,994,116 (GRCm39)	D100V	probably damaging	Het
Qars1	A	G	9: 108,392,227 (GRCm39)	N136D	probably damaging	Het
Rbm15b	A	G	9: 106,758,822 (GRCm39)		probably benign	Het
Rel	C	T	11: 23,692,761 (GRCm39)	G424D	probably benign	Het
Rsrc1	A	G	3: 67,257,338 (GRCm39)	D250G	probably benign	Het
Samt3	A	C	X: 85,090,740 (GRCm39)	M211L	probably benign	Het
Scn2a	C	A	2: 65,520,514 (GRCm39)	N503K	probably damaging	Het
Sh2d6	G	A	6: 72,494,527 (GRCm39)		probably benign	Het
Smg8	T	C	11: 86,976,157 (GRCm39)	T475A	probably benign	Het
Ssxb10	A	G	X: 8,197,258 (GRCm39)	D77G	probably benign	Het
Tbx20	T	A	9: 24,682,209 (GRCm39)	K48N	possibly damaging	Het
Tead1	C	A	7: 112,490,952 (GRCm39)	D231E	probably benign	Het
Ticam1	C	T	17: 56,578,555 (GRCm39)	R180H	probably damaging	Het
Tjp1	A	T	7: 64,962,603 (GRCm39)	F1111L	probably damaging	Het
Tlr11	T	A	14: 50,599,445 (GRCm39)	I477K	possibly damaging	Het
Ttc13	A	G	8: 125,440,926 (GRCm39)		probably null	Het
Ttc17	T	C	2: 94,157,049 (GRCm39)	N411S	probably benign	Het
Usp15	T	A	10: 122,960,946 (GRCm39)		probably benign	Het
Usp18	A	G	6: 121,229,476 (GRCm39)	K32E	probably benign	Het
Vmn1r12	A	T	6: 57,136,646 (GRCm39)	M248L	probably benign	Het
Zbtb14	C	A	17: 69,695,497 (GRCm39)	F398L	probably damaging	Het
Zfp930	T	A	8: 69,680,824 (GRCm39)	L172H	probably damaging	Het
Zfp976	G	A	7: 42,263,046 (GRCm39)	H264Y	probably damaging	Het

Other mutations in Fezf2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01895:Fezf2	APN	14	12,342,498 (GRCm38)	makesense	probably null
IGL02008:Fezf2	APN	14	12,343,705 (GRCm38)	missense	probably benign	0.01
IGL02238:Fezf2	APN	14	12,344,494 (GRCm38)	missense	probably damaging	0.98
IGL02428:Fezf2	APN	14	12,344,494 (GRCm38)	missense	probably damaging	0.98
IGL02588:Fezf2	APN	14	12,343,687 (GRCm38)	missense	probably damaging	1.00
K3955:Fezf2	UTSW	14	12,345,097 (GRCm38)	missense	probably damaging	1.00
R0266:Fezf2	UTSW	14	12,342,607 (GRCm38)	missense	probably damaging	1.00
R0281:Fezf2	UTSW	14	12,343,977 (GRCm38)	missense	probably damaging	1.00
R0849:Fezf2	UTSW	14	12,342,607 (GRCm38)	missense	probably damaging	1.00
R1061:Fezf2	UTSW	14	12,342,713 (GRCm38)	missense	probably damaging	1.00
R1107:Fezf2	UTSW	14	12,342,624 (GRCm38)	missense	probably damaging	1.00
R1326:Fezf2	UTSW	14	12,342,644 (GRCm38)	missense	probably benign	0.12
R1914:Fezf2	UTSW	14	12,343,988 (GRCm38)	missense	probably damaging	1.00
R1955:Fezf2	UTSW	14	12,342,644 (GRCm38)	missense	probably benign	0.12
R1980:Fezf2	UTSW	14	12,344,405 (GRCm38)	missense	probably benign	0.04
R1982:Fezf2	UTSW	14	12,344,405 (GRCm38)	missense	probably benign	0.04
R1988:Fezf2	UTSW	14	12,344,350 (GRCm38)	missense	probably damaging	0.98
R4023:Fezf2	UTSW	14	12,343,986 (GRCm38)	missense	probably damaging	1.00
R4025:Fezf2	UTSW	14	12,343,986 (GRCm38)	missense	probably damaging	1.00
R4026:Fezf2	UTSW	14	12,343,986 (GRCm38)	missense	probably damaging	1.00
R5373:Fezf2	UTSW	14	12,344,803 (GRCm38)	missense	possibly damaging	0.67
R6982:Fezf2	UTSW	14	12,343,645 (GRCm38)	missense	probably damaging	1.00
R7650:Fezf2	UTSW	14	12,342,653 (GRCm38)	missense	probably damaging	0.97
R7677:Fezf2	UTSW	14	12,344,941 (GRCm38)	missense	probably benign	0.38
R7898:Fezf2	UTSW	14	12,342,701 (GRCm38)	missense	possibly damaging	0.82
R8842:Fezf2	UTSW	14	12,345,079 (GRCm38)	missense	probably damaging	1.00
Z1177:Fezf2	UTSW	14	12,344,765 (GRCm38)	missense	probably benign	0.19

Predicted Primers

PCR Primer
(F):5'- CCTTTTGTCAACTGTGTGGC -3'
(R):5'- TTTTCTGCTGGAGAACGCC -3'

Sequencing Primer
(F):5'- CAACTGTGTGGCGATTTTACAGC -3'
(R):5'- CTGCTGGAGAACGCCAAACTG -3'

Posted On

2014-08-25