Incidental Mutation 'R4556:Vmn1r229'
ID |
341885 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r229
|
Ensembl Gene |
ENSMUSG00000061150 |
Gene Name |
vomeronasal 1 receptor 229 |
Synonyms |
V1re1 |
MMRRC Submission |
041597-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.054)
|
Stock # |
R4556 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
17 |
Chromosomal Location |
21034757-21035677 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 21034953 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Valine to Glutamic Acid
at position 66
(V66E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000076045
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000076759]
|
AlphaFold |
no structure available at present |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000076759
AA Change: V66E
PolyPhen 2
Score 0.788 (Sensitivity: 0.85; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000076045 Gene: ENSMUSG00000061150 AA Change: V66E
Domain | Start | End | E-Value | Type |
Pfam:TAS2R
|
3 |
286 |
2.7e-13 |
PFAM |
Pfam:7tm_1
|
22 |
285 |
4.3e-10 |
PFAM |
Pfam:V1R
|
31 |
293 |
6.6e-29 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.6%
- 10x: 97.1%
- 20x: 94.9%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 31 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A830005F24Rik |
T |
C |
13: 48,667,937 (GRCm39) |
|
probably benign |
Het |
Adamts16 |
G |
A |
13: 70,927,637 (GRCm39) |
|
probably benign |
Het |
Adamts17 |
A |
T |
7: 66,677,641 (GRCm39) |
E518D |
probably damaging |
Het |
Cdk5rap2 |
A |
G |
4: 70,157,549 (GRCm39) |
S1601P |
probably damaging |
Het |
Erc2 |
A |
C |
14: 28,024,861 (GRCm39) |
D580A |
probably damaging |
Het |
Fbxo4 |
A |
G |
15: 3,995,187 (GRCm39) |
*386R |
probably null |
Het |
Fbxo42 |
T |
A |
4: 140,926,321 (GRCm39) |
H334Q |
probably damaging |
Het |
Gdf5 |
A |
G |
2: 155,783,782 (GRCm39) |
R24G |
probably benign |
Het |
Lama3 |
G |
T |
18: 12,612,816 (GRCm39) |
R1200L |
possibly damaging |
Het |
Lxn |
T |
A |
3: 67,365,953 (GRCm39) |
I182F |
possibly damaging |
Het |
Mbd5 |
G |
A |
2: 49,169,406 (GRCm39) |
G1526R |
probably damaging |
Het |
Mcub |
G |
A |
3: 129,709,384 (GRCm39) |
Q310* |
probably null |
Het |
Ndufaf7 |
T |
C |
17: 79,249,516 (GRCm39) |
S138P |
probably benign |
Het |
Nktr |
A |
G |
9: 121,570,189 (GRCm39) |
T90A |
probably damaging |
Het |
Nr1h5 |
G |
A |
3: 102,853,457 (GRCm39) |
A350V |
probably benign |
Het |
Or1e29 |
G |
A |
11: 73,667,307 (GRCm39) |
T282I |
possibly damaging |
Het |
Or7e174 |
T |
C |
9: 20,012,619 (GRCm39) |
L188P |
possibly damaging |
Het |
Pros1 |
A |
G |
16: 62,721,036 (GRCm39) |
K197R |
possibly damaging |
Het |
Rmnd5b |
G |
T |
11: 51,517,732 (GRCm39) |
|
probably null |
Het |
Rnf25 |
A |
T |
1: 74,638,264 (GRCm39) |
I26N |
probably damaging |
Het |
Scn4a |
T |
C |
11: 106,211,272 (GRCm39) |
I1582V |
probably benign |
Het |
Sh2d3c |
A |
G |
2: 32,643,021 (GRCm39) |
T583A |
possibly damaging |
Het |
Sh3tc1 |
T |
C |
5: 35,864,426 (GRCm39) |
Y587C |
probably damaging |
Het |
Slc6a11 |
A |
G |
6: 114,221,773 (GRCm39) |
S488G |
probably benign |
Het |
Smim22 |
T |
A |
16: 4,825,730 (GRCm39) |
F38L |
possibly damaging |
Het |
Stab2 |
T |
G |
10: 86,803,543 (GRCm39) |
E335D |
possibly damaging |
Het |
Tas2r102 |
T |
C |
6: 132,739,878 (GRCm39) |
F262S |
probably damaging |
Het |
Thap12 |
A |
G |
7: 98,365,052 (GRCm39) |
N407D |
probably benign |
Het |
Tmem225 |
T |
C |
9: 40,060,762 (GRCm39) |
F107S |
probably damaging |
Het |
Vmn1r27 |
A |
G |
6: 58,192,804 (GRCm39) |
S67P |
possibly damaging |
Het |
Xrcc4 |
A |
T |
13: 90,140,623 (GRCm39) |
H195Q |
probably benign |
Het |
|
Other mutations in Vmn1r229 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
R0682:Vmn1r229
|
UTSW |
17 |
21,034,950 (GRCm39) |
missense |
probably benign |
0.43 |
R1401:Vmn1r229
|
UTSW |
17 |
21,034,904 (GRCm39) |
missense |
possibly damaging |
0.63 |
R1484:Vmn1r229
|
UTSW |
17 |
21,034,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R1551:Vmn1r229
|
UTSW |
17 |
21,035,051 (GRCm39) |
missense |
probably benign |
0.36 |
R1568:Vmn1r229
|
UTSW |
17 |
21,035,067 (GRCm39) |
missense |
probably damaging |
1.00 |
R1793:Vmn1r229
|
UTSW |
17 |
21,034,974 (GRCm39) |
missense |
possibly damaging |
0.61 |
R2157:Vmn1r229
|
UTSW |
17 |
21,035,638 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4458:Vmn1r229
|
UTSW |
17 |
21,034,894 (GRCm39) |
missense |
probably damaging |
1.00 |
R4891:Vmn1r229
|
UTSW |
17 |
21,035,081 (GRCm39) |
missense |
probably damaging |
1.00 |
R6310:Vmn1r229
|
UTSW |
17 |
21,034,976 (GRCm39) |
missense |
probably benign |
0.01 |
R6995:Vmn1r229
|
UTSW |
17 |
21,035,277 (GRCm39) |
missense |
probably damaging |
1.00 |
R8109:Vmn1r229
|
UTSW |
17 |
21,035,268 (GRCm39) |
missense |
probably benign |
0.05 |
R8155:Vmn1r229
|
UTSW |
17 |
21,035,472 (GRCm39) |
missense |
probably damaging |
1.00 |
R8232:Vmn1r229
|
UTSW |
17 |
21,035,309 (GRCm39) |
missense |
probably damaging |
0.96 |
R8828:Vmn1r229
|
UTSW |
17 |
21,034,990 (GRCm39) |
missense |
probably damaging |
0.97 |
R8943:Vmn1r229
|
UTSW |
17 |
21,035,418 (GRCm39) |
missense |
possibly damaging |
0.91 |
R9147:Vmn1r229
|
UTSW |
17 |
21,034,758 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R9148:Vmn1r229
|
UTSW |
17 |
21,034,758 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R9407:Vmn1r229
|
UTSW |
17 |
21,035,259 (GRCm39) |
missense |
probably damaging |
1.00 |
R9621:Vmn1r229
|
UTSW |
17 |
21,035,315 (GRCm39) |
missense |
probably benign |
0.00 |
Z1088:Vmn1r229
|
UTSW |
17 |
21,035,327 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Predicted Primers |
PCR Primer
(F):5'- GCTGAATGACATAATGGATTTTGGG -3'
(R):5'- GCCCATGAACTTTGCTGTTTG -3'
Sequencing Primer
(F):5'- CTGGCAATGGGAATTGTACTCTCAC -3'
(R):5'- GCTCTTTAAATTCCTTCCAGCAGGAG -3'
|
Posted On |
2015-09-24 |