Mutagenetix > Incidental Mutation

Incidental Mutation 'R4843:Srfbp1'

372024

Institutional Source

Beutler Lab

Gene Symbol

Srfbp1

Ensembl Gene

ENSMUSG00000024528

Gene Name

serum response factor binding protein 1

Synonyms

2810036K01Rik

MMRRC Submission

042456-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.964) question?

Stock #

R4843 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

52598765-52625003 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 52621749 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Arginine at position 270 (K270R)

Ref Sequence

ENSEMBL: ENSMUSP00000025406 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000025406]

AlphaFold

Q9CZ91

Predicted Effect

probably benign
Transcript: ENSMUST00000025406
AA Change: K270R

PolyPhen 2 Score 0.407 (Sensitivity: 0.89; Specificity: 0.90)

SMART Domains

Protein: ENSMUSP00000025406
Gene: ENSMUSG00000024528
AA Change: K270R

Domain	Start	End	E-Value	Type
low complexity region	30	43	N/A	INTRINSIC
low complexity region	139	152	N/A	INTRINSIC
low complexity region	180	192	N/A	INTRINSIC
low complexity region	261	271	N/A	INTRINSIC
low complexity region	285	296	N/A	INTRINSIC
Pfam:BUD22	338	440	1.1e-14	PFAM

Meta Mutation Damage Score

0.1193

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 96.6%
20x: 93.1%

Validation Efficiency

95% (58/61)

Allele List at MGI

Other mutations in this stock

Total: 53 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acp1	T	A	12: 30,946,144 (GRCm39)	K124*	probably null	Het
Actl11	G	T	9: 107,806,691 (GRCm39)	C338F	possibly damaging	Het
Adam5	G	A	8: 25,303,552 (GRCm39)	S125F	probably damaging	Het
Ap2s1	C	A	7: 16,477,271 (GRCm39)	A44D	possibly damaging	Het
AW554918	T	C	18: 25,473,057 (GRCm39)	V84A	probably benign	Het
Bsn	G	A	9: 107,984,388 (GRCm39)	T3222M	unknown	Het
Car15	A	G	16: 17,654,472 (GRCm39)	Y155H	possibly damaging	Het
Cdca2	G	T	14: 67,914,425 (GRCm39)	P945T	probably damaging	Het
Cdh16	A	G	8: 105,348,172 (GRCm39)	F182L	probably damaging	Het
Cers6	G	A	2: 68,899,003 (GRCm39)	A214T	probably benign	Het
Ces1g	A	T	8: 94,057,893 (GRCm39)	M136K	probably damaging	Het
Cnppd1	A	G	1: 75,113,086 (GRCm39)	V394A	probably benign	Het
Cyp3a59	A	T	5: 146,033,071 (GRCm39)	I148F	possibly damaging	Het
Dnah1	G	A	14: 30,986,920 (GRCm39)	A3624V	probably damaging	Het
Exoc3l4	T	C	12: 111,394,487 (GRCm39)		probably benign	Het
Fap	G	T	2: 62,374,718 (GRCm39)	P227Q	probably damaging	Het
Fbxw10	G	A	11: 62,738,151 (GRCm39)	R15H	possibly damaging	Het
Gm11011	T	C	2: 169,429,240 (GRCm39)		probably benign	Het
Gm11146	A	C	16: 77,392,144 (GRCm39)		probably benign	Het
Grip1	G	A	10: 119,765,920 (GRCm39)	R84Q	probably damaging	Het
Hipk2	A	G	6: 38,796,192 (GRCm39)	C19R	possibly damaging	Het
Hmgcll1	A	G	9: 75,979,916 (GRCm39)	D102G	possibly damaging	Het
Ighv16-1	A	T	12: 114,032,504 (GRCm39)	Y99*	probably null	Het
Kank1	T	G	19: 25,408,371 (GRCm39)	S1283R	probably damaging	Het
Kcnip1	T	A	11: 33,594,504 (GRCm39)	H95L	probably benign	Het
L3mbtl3	A	T	10: 26,207,777 (GRCm39)	L314Q	unknown	Het
Marveld3	C	A	8: 110,688,702 (GRCm39)	R13L	possibly damaging	Het
Mtrf1l	G	T	10: 5,773,696 (GRCm39)	P23Q	possibly damaging	Het
Npdc1	G	A	2: 25,298,957 (GRCm39)	D284N	probably damaging	Het
Or5p69	G	A	7: 107,967,350 (GRCm39)	A218T	probably benign	Het
Or6c1b	G	T	10: 129,273,316 (GRCm39)	V212L	probably benign	Het
Paqr7	A	G	4: 134,234,278 (GRCm39)	Y45C	probably damaging	Het
Plod3	G	A	5: 137,019,854 (GRCm39)	W428*	probably null	Het
Pnisr	T	A	4: 21,857,400 (GRCm39)		probably benign	Het
Ppip5k1	C	A	2: 121,157,368 (GRCm39)	R1046L	probably damaging	Het
Ppp1r12b	G	T	1: 134,883,471 (GRCm39)	A17E	probably benign	Het
Prmt5	A	T	14: 54,753,582 (GRCm39)	I99N	probably benign	Het
Ripk2	T	C	4: 16,155,073 (GRCm39)	T149A	probably damaging	Het
Rpf2	C	A	10: 40,122,998 (GRCm39)		probably benign	Het
Rtf1	T	A	2: 119,536,017 (GRCm39)	D190E	possibly damaging	Het
Shank2	T	A	7: 143,585,146 (GRCm39)	M49K	probably benign	Het
Snd1	T	G	6: 28,668,642 (GRCm39)	V443G	probably damaging	Het
Spag9	T	C	11: 93,988,644 (GRCm39)	F555L	probably damaging	Het
Tenm2	T	A	11: 35,914,847 (GRCm39)	N2230I	probably damaging	Het
Tmem106a	T	C	11: 101,477,021 (GRCm39)		probably benign	Het
Tpsg1	A	T	17: 25,589,591 (GRCm39)		probably benign	Het
Trank1	A	G	9: 111,195,146 (GRCm39)	S1057G	probably benign	Het
Unc13d	G	A	11: 115,965,085 (GRCm39)	T220M	probably damaging	Het
Vmn1r68	T	C	7: 10,261,904 (GRCm39)	T65A	probably benign	Het
Vps50	T	C	6: 3,536,974 (GRCm39)		probably null	Het
Washc5	A	G	15: 59,222,220 (GRCm39)	I85T	possibly damaging	Het
Zfp677	C	T	17: 21,612,788 (GRCm39)	T2I	probably benign	Het
Zxdc	A	G	6: 90,359,254 (GRCm39)	T629A	probably damaging	Het

Other mutations in Srfbp1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02686:Srfbp1	APN	18	52,608,726 (GRCm39)	missense	probably damaging	1.00
R0308:Srfbp1	UTSW	18	52,621,614 (GRCm39)	missense	probably benign	0.01
R0765:Srfbp1	UTSW	18	52,623,507 (GRCm39)	splice site	probably benign
R0811:Srfbp1	UTSW	18	52,620,588 (GRCm39)	missense	probably damaging	0.98
R0812:Srfbp1	UTSW	18	52,620,588 (GRCm39)	missense	probably damaging	0.98
R1625:Srfbp1	UTSW	18	52,621,788 (GRCm39)	missense	probably benign	0.06
R1659:Srfbp1	UTSW	18	52,621,967 (GRCm39)	missense	possibly damaging	0.68
R4438:Srfbp1	UTSW	18	52,621,403 (GRCm39)	missense	probably benign	0.03
R4761:Srfbp1	UTSW	18	52,621,638 (GRCm39)	missense	probably damaging	1.00
R5417:Srfbp1	UTSW	18	52,621,697 (GRCm39)	missense	probably benign
R5613:Srfbp1	UTSW	18	52,616,717 (GRCm39)	missense	probably damaging	1.00
R5708:Srfbp1	UTSW	18	52,622,018 (GRCm39)	missense	probably damaging	1.00
R5900:Srfbp1	UTSW	18	52,621,853 (GRCm39)	missense	probably benign	0.31
R6349:Srfbp1	UTSW	18	52,622,034 (GRCm39)	missense	probably benign	0.38
R6711:Srfbp1	UTSW	18	52,621,373 (GRCm39)	missense	probably damaging	1.00
R7660:Srfbp1	UTSW	18	52,608,671 (GRCm39)	missense	probably damaging	1.00
R7707:Srfbp1	UTSW	18	52,616,726 (GRCm39)	missense	probably damaging	1.00
R8140:Srfbp1	UTSW	18	52,621,762 (GRCm39)	missense	probably damaging	1.00
R8548:Srfbp1	UTSW	18	52,621,463 (GRCm39)	missense	probably benign	0.00
R8912:Srfbp1	UTSW	18	52,623,686 (GRCm39)	missense	possibly damaging	0.94
R8930:Srfbp1	UTSW	18	52,623,117 (GRCm39)	missense	possibly damaging	0.75
R8932:Srfbp1	UTSW	18	52,623,117 (GRCm39)	missense	possibly damaging	0.75
R8992:Srfbp1	UTSW	18	52,609,392 (GRCm39)	nonsense	probably null
R9116:Srfbp1	UTSW	18	52,623,102 (GRCm39)	missense	possibly damaging	0.85
R9365:Srfbp1	UTSW	18	52,623,540 (GRCm39)	missense	possibly damaging	0.62
R9479:Srfbp1	UTSW	18	52,621,332 (GRCm39)	missense	possibly damaging	0.77

Predicted Primers

PCR Primer
(F):5'- TGCAGCAAGTGGTTCAAAAG -3'
(R):5'- CGTTTCTTACATCCCAGGGG -3'

Sequencing Primer
(F):5'- ACCACTCCAGGGTCTCAG -3'
(R):5'- CTTACATCCCAGGGGGTTTCAAG -3'

Posted On

2016-03-01