Incidental Mutation 'IGL03397:Tcam1'
ID421300
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tcam1
Ensembl Gene ENSMUSG00000020712
Gene Nametesticular cell adhesion molecule 1
Synonyms
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #IGL03397
Quality Score
Status
Chromosome11
Chromosomal Location106276672-106288745 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 106285386 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Valine at position 313 (I313V)
Ref Sequence ENSEMBL: ENSMUSP00000115544 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000044462] [ENSMUST00000142472]
Predicted Effect probably benign
Transcript: ENSMUST00000044462
AA Change: I313V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000044757
Gene: ENSMUSG00000020712
AA Change: I313V

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Pfam:ICAM_N 22 112 5.4e-30 PFAM
IG_like 117 214 1.66e2 SMART
IG_like 316 397 5.04e1 SMART
IG 408 478 2.79e0 SMART
transmembrane domain 488 510 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000142472
AA Change: I313V

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000115544
Gene: ENSMUSG00000020712
AA Change: I313V

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Pfam:ICAM_N 22 112 3.2e-30 PFAM
Pfam:Ig_2 109 214 1.7e-2 PFAM
Pfam:Ig_2 311 396 5.1e-3 PFAM
Coding Region Coverage
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit normal male fertility. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 30 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930435E12Rik G A 16: 38,828,693 P18L probably damaging Het
Abcc2 A T 19: 43,784,304 Y51F probably benign Het
Ankrd42 G A 7: 92,619,554 L194F probably damaging Het
Ccdc81 G T 7: 89,896,828 T56N probably damaging Het
Cdh10 T C 15: 18,964,028 I92T probably damaging Het
Eif2b4 A G 5: 31,187,653 I550T probably damaging Het
Epb41l3 A G 17: 69,248,692 Y304C probably damaging Het
Gm10244 A G 6: 39,420,806 probably benign Het
Gm5416 A T 16: 36,213,614 I55F probably damaging Het
Hist1h2bm T C 13: 21,722,381 I95T possibly damaging Het
Lrrc74a T C 12: 86,758,538 V378A probably benign Het
Mcm6 C T 1: 128,344,302 D453N probably damaging Het
Mctp2 A G 7: 72,259,277 L96P probably damaging Het
Nlrp5 G A 7: 23,413,334 V139M probably damaging Het
Nrcam T G 12: 44,559,757 S429A probably damaging Het
Olfr235 C A 19: 12,268,502 Q91K probably benign Het
Pdgfrb A T 18: 61,079,681 T886S probably benign Het
Rapgef5 T A 12: 117,748,441 F754L probably damaging Het
Sbf1 T C 15: 89,288,721 K1863R probably damaging Het
Sis T C 3: 72,935,879 T751A probably benign Het
Six3 G T 17: 85,621,646 R136L probably damaging Het
Slc6a12 A G 6: 121,357,045 D280G probably damaging Het
Sox2 A G 3: 34,650,537 D41G probably damaging Het
Stxbp4 A T 11: 90,540,234 L417M probably damaging Het
Tgm2 T C 2: 158,120,258 Y547C probably damaging Het
Thsd7b A G 1: 129,596,164 R312G probably benign Het
Tmem94 G T 11: 115,787,568 probably benign Het
Usp39 A G 6: 72,336,313 M298T possibly damaging Het
Vmn2r85 C T 10: 130,425,394 C358Y probably damaging Het
Zscan18 A T 7: 12,773,561 S497T probably damaging Het
Other mutations in Tcam1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03189:Tcam1 APN 11 106285386 missense probably benign
IGL03396:Tcam1 APN 11 106285386 missense probably benign
R0241:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0241:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0306:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0313:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0378:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0380:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0381:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0382:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0393:Tcam1 UTSW 11 106284214 missense probably benign 0.19
R0401:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0448:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0537:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0602:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R0669:Tcam1 UTSW 11 106285426 missense possibly damaging 0.94
R0706:Tcam1 UTSW 11 106284078 missense probably benign 0.31
R2307:Tcam1 UTSW 11 106284114 missense probably damaging 1.00
R4957:Tcam1 UTSW 11 106282879 missense probably damaging 1.00
R5050:Tcam1 UTSW 11 106285452 missense possibly damaging 0.93
R5269:Tcam1 UTSW 11 106285527 missense probably benign 0.24
R5437:Tcam1 UTSW 11 106285423 missense probably damaging 1.00
R6235:Tcam1 UTSW 11 106284054 nonsense probably null
R6248:Tcam1 UTSW 11 106282826 missense probably benign 0.17
R6302:Tcam1 UTSW 11 106286450 missense probably damaging 1.00
R7399:Tcam1 UTSW 11 106284085 missense probably damaging 1.00
R8236:Tcam1 UTSW 11 106286417 missense probably benign 0.01
R8402:Tcam1 UTSW 11 106286905 missense probably damaging 0.99
Z1177:Tcam1 UTSW 11 106282847 frame shift probably null
Z1177:Tcam1 UTSW 11 106282850 missense probably benign 0.20
Posted On2016-08-02