Mutagenetix > Incidental Mutation

Incidental Mutation 'R5932:Fhl3'

461910

Institutional Source

Beutler Lab

Gene Symbol

Fhl3

Ensembl Gene

ENSMUSG00000032643

Gene Name

four and a half LIM domains 3

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.092) question?

Stock #

R5932 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

124594494-124602404 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 124599520 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Histidine at position 32 (Y32H)

Ref Sequence

ENSEMBL: ENSMUSP00000121702 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000038684] [ENSMUST00000106199] [ENSMUST00000145942]

AlphaFold

Q9R059

Predicted Effect

probably damaging
Transcript: ENSMUST00000038684
AA Change: Y32H

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000040150
Gene: ENSMUSG00000032643
AA Change: Y32H

Domain	Start	End	E-Value	Type
LIM	39	92	2.7e-11	SMART
LIM	100	153	1.67e-16	SMART
LIM	161	212	4.48e-17	SMART
LIM	220	284	2.91e-16	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000106199
AA Change: Y32H

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000101805
Gene: ENSMUSG00000032643
AA Change: Y32H

Domain	Start	End	E-Value	Type
LIM	39	92	2.7e-11	SMART
LIM	100	153	1.67e-16	SMART
LIM	161	212	4.48e-17	SMART
LIM	220	275	8.49e-18	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000145942
AA Change: Y32H

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000121702
Gene: ENSMUSG00000032643
AA Change: Y32H

Domain	Start	End	E-Value	Type
Blast:LIM	1	31	5e-6	BLAST
LIM	39	92	2.7e-11	SMART

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.2%
20x: 95.0%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of a family of proteins containing a four-and-a-half LIM domain, which is a highly conserved double zinc finger motif. The encoded protein has been shown to interact with the cancer developmental regulators SMAD2, SMAD3, and SMAD4, the skeletal muscle myogenesis protein MyoD, and the high-affinity IgE beta chain regulator MZF-1. This protein may be involved in tumor suppression, repression of MyoD expression, and repression of IgE receptor expression. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2011]

Allele List at MGI

Other mutations in this stock

Total: 66 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
A1cf	T	A	19: 31,870,518 (GRCm39)	S7T	possibly damaging	Het
Aatk	C	T	11: 119,912,359 (GRCm39)	G29S	probably damaging	Het
Akap1	A	G	11: 88,722,585 (GRCm39)	L890P	probably damaging	Het
Akap13	T	A	7: 75,259,932 (GRCm39)	M49K	probably damaging	Het
Ankrd17	A	T	5: 90,413,295 (GRCm39)	N1206K	probably damaging	Het
Bbs7	G	A	3: 36,636,847 (GRCm39)	T480I	probably benign	Het
Bbs9	A	G	9: 22,723,627 (GRCm39)	E769G	probably damaging	Het
Bpgm	T	A	6: 34,464,860 (GRCm39)	S192R	probably damaging	Het
Brinp1	C	A	4: 68,711,178 (GRCm39)	K343N	probably benign	Het
Cabyr	T	G	18: 12,887,407 (GRCm39)	V185G	probably damaging	Het
Cadm1	C	A	9: 47,710,749 (GRCm39)	D217E	probably damaging	Het
Camk1g	T	A	1: 193,036,347 (GRCm39)	E171V	probably benign	Het
Casz1	T	A	4: 149,023,570 (GRCm39)	M825K	possibly damaging	Het
Ccdc27	A	G	4: 154,111,231 (GRCm39)	V627A	probably benign	Het
Ccdc40	T	G	11: 119,141,838 (GRCm39)	I808R	probably damaging	Het
Cdh23	G	A	10: 60,228,763 (GRCm39)	R1140C	probably damaging	Het
Celsr1	A	G	15: 85,916,905 (GRCm39)	V356A	probably damaging	Het
Cep126	T	A	9: 8,103,509 (GRCm39)	D167V	probably damaging	Het
Chmp4b	C	T	2: 154,533,201 (GRCm39)	T147I	probably benign	Het
Clstn3	A	T	6: 124,415,291 (GRCm39)	M728K	probably benign	Het
Col7a1	A	T	9: 108,809,279 (GRCm39)	E2618V	unknown	Het
Cplane1	T	A	15: 8,274,079 (GRCm39)		probably null	Het
Crls1	T	A	2: 132,706,087 (GRCm39)	Y170*	probably null	Het
Dennd2b	G	A	7: 109,169,223 (GRCm39)	T24M	probably damaging	Het
Epas1	T	G	17: 87,135,074 (GRCm39)	I569S	possibly damaging	Het
Fibp	G	A	19: 5,514,453 (GRCm39)	G333D	probably benign	Het
Frmd4a	C	T	2: 4,534,650 (GRCm39)	T156I	probably damaging	Het
Gcn1	T	C	5: 115,730,435 (GRCm39)	L873P	possibly damaging	Het
Gpr141b	C	A	13: 19,913,646 (GRCm39)		noncoding transcript	Het
Hectd3	G	A	4: 116,859,470 (GRCm39)	R698H	possibly damaging	Het
Il17a	T	C	1: 20,803,977 (GRCm39)	V124A	probably damaging	Het
Kif14	A	T	1: 136,444,128 (GRCm39)	E1373D	probably benign	Het
Klra4	C	T	6: 130,030,016 (GRCm39)	V190M	possibly damaging	Het
Kmt2a	T	C	9: 44,731,944 (GRCm39)		probably benign	Het
L3mbtl1	GGCCG	GG	2: 162,809,256 (GRCm39)		probably benign	Het
Lamb2	T	C	9: 108,357,810 (GRCm39)	I111T	probably damaging	Het
Lrch3	A	T	16: 32,796,106 (GRCm39)	D204V	probably damaging	Het
Mansc1	C	A	6: 134,587,478 (GRCm39)	R233L	possibly damaging	Het
Mkrn3	A	G	7: 62,068,655 (GRCm39)	C379R	probably damaging	Het
Ncoa3	T	A	2: 165,912,045 (GRCm39)		probably null	Het
Neu3	A	T	7: 99,462,525 (GRCm39)	C399*	probably null	Het
Or10ad1	T	G	15: 98,105,296 (GRCm39)	*323S	probably null	Het
Or52e8	G	A	7: 104,624,862 (GRCm39)	T114M	probably damaging	Het
Pcare	T	C	17: 72,058,748 (GRCm39)	R310G	probably damaging	Het
Pde5a	T	C	3: 122,634,693 (GRCm39)	F713L	probably benign	Het
Pdk1	T	A	2: 71,713,760 (GRCm39)		probably null	Het
Plin4	A	G	17: 56,413,356 (GRCm39)	V423A	possibly damaging	Het
Pstpip1	T	A	9: 56,033,214 (GRCm39)	Y249N	probably damaging	Het
Ptprf	A	T	4: 118,068,964 (GRCm39)	C1673S	probably benign	Het
Pum1	A	G	4: 130,457,677 (GRCm39)	T230A	probably benign	Het
Qsox1	A	T	1: 155,665,079 (GRCm39)	D287E	probably benign	Het
Rad51ap2	A	G	12: 11,508,387 (GRCm39)	N770D	probably damaging	Het
Rtp3	T	A	9: 110,815,760 (GRCm39)	I202F	probably benign	Het
Slc26a4	C	T	12: 31,585,248 (GRCm39)		probably null	Het
Spmip7	A	G	11: 11,438,513 (GRCm39)		probably benign	Het
Sptbn1	C	G	11: 30,086,136 (GRCm39)	V1191L	probably damaging	Het
Tead2	T	C	7: 44,882,323 (GRCm39)	Y121H	probably benign	Het
Thsd7b	T	C	1: 129,358,575 (GRCm39)	L3P	probably benign	Het
Trim24	T	C	6: 37,934,010 (GRCm39)	I651T	probably damaging	Het
Usp2	A	G	9: 44,003,630 (GRCm39)	I481V	probably benign	Het
Vps13d	C	A	4: 144,771,611 (GRCm39)	V4056F	possibly damaging	Het
Yeats2	A	G	16: 20,011,913 (GRCm39)	E496G	probably benign	Het
Zap70	A	G	1: 36,820,227 (GRCm39)	K503E	probably damaging	Het
Zbtb46	A	G	2: 181,053,713 (GRCm39)	L333P	probably benign	Het
Zfc3h1	A	T	10: 115,236,815 (GRCm39)	T430S	probably benign	Het
Zfp618	C	T	4: 63,036,803 (GRCm39)	R368*	probably null	Het

Other mutations in Fhl3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0592:Fhl3	UTSW	4	124,599,470 (GRCm39)	missense	probably benign	0.23
R1118:Fhl3	UTSW	4	124,599,584 (GRCm39)	critical splice donor site	probably null
R2402:Fhl3	UTSW	4	124,599,481 (GRCm39)	missense	probably damaging	1.00
R2921:Fhl3	UTSW	4	124,599,463 (GRCm39)	missense	probably damaging	1.00
R2923:Fhl3	UTSW	4	124,599,463 (GRCm39)	missense	probably damaging	1.00
R4583:Fhl3	UTSW	4	124,601,342 (GRCm39)	missense	probably benign	0.41
R5147:Fhl3	UTSW	4	124,601,724 (GRCm39)	missense	probably benign	0.01
R5460:Fhl3	UTSW	4	124,599,796 (GRCm39)	missense	probably damaging	1.00
R6855:Fhl3	UTSW	4	124,601,315 (GRCm39)	missense	probably benign	0.00
R9267:Fhl3	UTSW	4	124,601,498 (GRCm39)	critical splice donor site	probably null

Predicted Primers

PCR Primer
(F):5'- ACATGCTCTGACCTGGCATC -3'
(R):5'- GTCCTCATAGAACAGTTCCTTCGG -3'

Sequencing Primer
(F):5'- TGCAAAGAGGTTTTATCCAGAGCTG -3'
(R):5'- AACAGTTCCTTCGGGGAGAC -3'

Posted On

2017-02-28