Incidental Mutation 'IGL01947:Or4f6'
| ID |
181269 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Or4f6
|
| Ensembl Gene |
ENSMUSG00000108827 |
| Gene Name |
olfactory receptor family 4 subfamily F member 6 |
| Synonyms |
Olfr1310, MOR245-3, GA_x6K02T2Q125-73056609-73055671 |
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.234)
|
| Stock # |
IGL01947
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
2 |
| Chromosomal Location |
111838591-111839529 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
A to T
at 111839361 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Serine to Threonine
at position 57
(S57T)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149701
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000207169]
[ENSMUST00000213559]
|
| AlphaFold |
Q8VF85 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000099602
AA Change: S57T
PolyPhen 2
Score 0.080 (Sensitivity: 0.00; Specificity: 0.00)
|
| SMART Domains |
Protein: ENSMUSP00000097197
Gene: ENSMUSG00000074949
AA Change: S57T
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
305 |
7.7e-41 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
301 |
3.3e-8 |
PFAM |
|
Pfam:7tm_1
|
41 |
287 |
5.9e-24 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000207169
AA Change: S57T
PolyPhen 2
Score 0.859 (Sensitivity: 0.83; Specificity: 0.93)
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000213559
AA Change: S57T
PolyPhen 2
Score 0.859 (Sensitivity: 0.83; Specificity: 0.93)
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 42 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Adgrl4 |
T |
C |
3: 151,216,428 (GRCm39) |
|
probably null |
Het |
| Aloxe3 |
T |
A |
11: 69,033,847 (GRCm39) |
|
probably benign |
Het |
| Atic |
C |
T |
1: 71,609,996 (GRCm39) |
|
probably benign |
Het |
| Avpr1a |
T |
C |
10: 122,288,087 (GRCm39) |
V365A |
probably benign |
Het |
| Brd7 |
A |
G |
8: 89,059,503 (GRCm39) |
|
probably benign |
Het |
| Cc2d2a |
A |
G |
5: 43,845,579 (GRCm39) |
N332D |
probably damaging |
Het |
| Cdh20 |
C |
T |
1: 104,921,649 (GRCm39) |
P649S |
possibly damaging |
Het |
| Cgnl1 |
T |
C |
9: 71,632,326 (GRCm39) |
T342A |
probably damaging |
Het |
| Chst10 |
A |
G |
1: 38,904,646 (GRCm39) |
L349P |
probably damaging |
Het |
| Cox6b2 |
T |
A |
7: 4,754,929 (GRCm39) |
K77* |
probably null |
Het |
| Crnkl1 |
G |
A |
2: 145,763,744 (GRCm39) |
A498V |
probably benign |
Het |
| Cux1 |
A |
G |
5: 136,303,979 (GRCm39) |
L1394P |
probably benign |
Het |
| Dapp1 |
T |
C |
3: 137,641,404 (GRCm39) |
Y197C |
probably damaging |
Het |
| Dcc |
A |
G |
18: 71,959,280 (GRCm39) |
I164T |
probably benign |
Het |
| Disp3 |
T |
A |
4: 148,344,976 (GRCm39) |
I472F |
probably damaging |
Het |
| Gm10392 |
A |
T |
11: 77,408,306 (GRCm39) |
D104E |
probably benign |
Het |
| Gm10718 |
A |
T |
9: 3,025,118 (GRCm39) |
Y194F |
probably benign |
Het |
| Gpd1 |
A |
G |
15: 99,618,112 (GRCm39) |
I143V |
possibly damaging |
Het |
| Hmcn1 |
T |
A |
1: 150,608,643 (GRCm39) |
N1513I |
possibly damaging |
Het |
| Jakmip2 |
T |
C |
18: 43,680,159 (GRCm39) |
I733V |
probably benign |
Het |
| Klhl12 |
T |
A |
1: 134,391,689 (GRCm39) |
L107H |
probably damaging |
Het |
| Lcn8 |
A |
G |
2: 25,545,157 (GRCm39) |
D109G |
probably damaging |
Het |
| Maz |
A |
T |
7: 126,623,614 (GRCm39) |
|
probably null |
Het |
| Mttp |
T |
A |
3: 137,812,890 (GRCm39) |
D595V |
probably damaging |
Het |
| Mymk |
A |
C |
2: 26,956,406 (GRCm39) |
L58R |
possibly damaging |
Het |
| Nckap1 |
A |
C |
2: 80,339,097 (GRCm39) |
I977S |
probably damaging |
Het |
| Nckap1l |
A |
T |
15: 103,399,442 (GRCm39) |
I1021F |
probably benign |
Het |
| Or12d2 |
A |
T |
17: 37,624,556 (GRCm39) |
C240S |
probably damaging |
Het |
| Or4f14b |
A |
T |
2: 111,775,339 (GRCm39) |
M154K |
probably benign |
Het |
| Or6c38 |
G |
A |
10: 128,929,747 (GRCm39) |
T32I |
possibly damaging |
Het |
| Pde5a |
T |
A |
3: 122,629,259 (GRCm39) |
F644L |
probably damaging |
Het |
| Pdzd2 |
A |
G |
15: 12,592,440 (GRCm39) |
I68T |
probably damaging |
Het |
| Pik3r4 |
T |
A |
9: 105,563,349 (GRCm39) |
V1242D |
possibly damaging |
Het |
| Ppp6r2 |
G |
T |
15: 89,162,929 (GRCm39) |
W517L |
probably damaging |
Het |
| Scrib |
A |
T |
15: 75,933,616 (GRCm39) |
I703K |
probably benign |
Het |
| Serpina1b |
T |
C |
12: 103,695,576 (GRCm39) |
S322G |
probably benign |
Het |
| Siglecg |
C |
A |
7: 43,058,187 (GRCm39) |
Q25K |
probably benign |
Het |
| Slc12a3 |
G |
A |
8: 95,092,447 (GRCm39) |
|
probably null |
Het |
| Slc6a13 |
G |
T |
6: 121,302,116 (GRCm39) |
|
probably null |
Het |
| Stard13 |
A |
T |
5: 150,986,309 (GRCm39) |
D282E |
probably damaging |
Het |
| Tpte |
A |
T |
8: 22,845,489 (GRCm39) |
Y513F |
possibly damaging |
Het |
| Ubox5 |
T |
A |
2: 130,442,579 (GRCm39) |
K36I |
possibly damaging |
Het |
|
| Other mutations in Or4f6 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02700:Or4f6
|
APN |
2 |
111,839,036 (GRCm39) |
missense |
probably benign |
0.04 |
|
IGL03008:Or4f6
|
APN |
2 |
111,838,868 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
IGL03121:Or4f6
|
APN |
2 |
111,838,953 (GRCm39) |
missense |
probably benign |
0.02 |
|
R0025:Or4f6
|
UTSW |
2 |
111,839,365 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1624:Or4f6
|
UTSW |
2 |
111,838,877 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1851:Or4f6
|
UTSW |
2 |
111,839,036 (GRCm39) |
missense |
probably benign |
0.04 |
|
R3872:Or4f6
|
UTSW |
2 |
111,838,668 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R3873:Or4f6
|
UTSW |
2 |
111,838,668 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R3874:Or4f6
|
UTSW |
2 |
111,838,668 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R4651:Or4f6
|
UTSW |
2 |
111,838,595 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4652:Or4f6
|
UTSW |
2 |
111,838,595 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4834:Or4f6
|
UTSW |
2 |
111,839,276 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5076:Or4f6
|
UTSW |
2 |
111,838,937 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7262:Or4f6
|
UTSW |
2 |
111,838,902 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7339:Or4f6
|
UTSW |
2 |
111,838,820 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7657:Or4f6
|
UTSW |
2 |
111,839,093 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7798:Or4f6
|
UTSW |
2 |
111,838,617 (GRCm39) |
missense |
probably benign |
|
|
R7875:Or4f6
|
UTSW |
2 |
111,839,192 (GRCm39) |
missense |
probably benign |
0.32 |
|
R8869:Or4f6
|
UTSW |
2 |
111,838,596 (GRCm39) |
missense |
possibly damaging |
0.88 |
|
R9689:Or4f6
|
UTSW |
2 |
111,839,124 (GRCm39) |
missense |
probably benign |
0.29 |
|
X0027:Or4f6
|
UTSW |
2 |
111,839,169 (GRCm39) |
missense |
probably damaging |
1.00 |
|
Z1176:Or4f6
|
UTSW |
2 |
111,838,802 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Posted On |
2014-05-07 |
Incidental Mutation