Incidental Mutation 'IGL02102:Vmn1r80'
ID 279780
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn1r80
Ensembl Gene ENSMUSG00000115744
Gene Name vomeronasal 1 receptor 80
Synonyms V1rg3
Accession Numbers
Essential gene? Probably non essential (E-score: 0.146) question?
Stock # IGL02102
Quality Score
Status
Chromosome 7
Chromosomal Location 11926892-11927818 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 11927618 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Phenylalanine to Leucine at position 243 (F243L)
Ref Sequence ENSEMBL: ENSMUSP00000153967 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000075053] [ENSMUST00000227205] [ENSMUST00000227471] [ENSMUST00000227755] [ENSMUST00000228028] [ENSMUST00000228578]
AlphaFold L7N1Z3
Predicted Effect probably damaging
Transcript: ENSMUST00000075053
AA Change: F243L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000074564
Gene: ENSMUSG00000115744
AA Change: F243L

DomainStartEndE-ValueType
Pfam:TAS2R 1 301 5.4e-11 PFAM
Pfam:7tm_1 23 290 5.3e-7 PFAM
Pfam:V1R 31 298 3e-31 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000227205
AA Change: F243L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000227240
Predicted Effect probably benign
Transcript: ENSMUST00000227471
Predicted Effect probably damaging
Transcript: ENSMUST00000227755
AA Change: F243L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Predicted Effect probably benign
Transcript: ENSMUST00000228028
Predicted Effect noncoding transcript
Transcript: ENSMUST00000228047
Predicted Effect probably damaging
Transcript: ENSMUST00000228578
AA Change: F243L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000228563
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 45 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamts9 T C 6: 92,754,420 (GRCm39) T1338A probably benign Het
Adcy3 G A 12: 4,184,699 (GRCm39) C125Y probably damaging Het
Aoc1 A T 6: 48,882,896 (GRCm39) K257N probably damaging Het
Apob T C 12: 8,039,407 (GRCm39) V497A possibly damaging Het
Atp8b5 T A 4: 43,364,167 (GRCm39) V684D probably benign Het
AW551984 A G 9: 39,500,987 (GRCm39) W763R probably damaging Het
Blm G A 7: 80,119,504 (GRCm39) T1026M probably damaging Het
Cd160 A G 3: 96,712,886 (GRCm39) I126T possibly damaging Het
Cdk14 T C 5: 5,430,083 (GRCm39) K15E probably benign Het
Cnot6l T C 5: 96,239,518 (GRCm39) K261R probably damaging Het
Cyp3a13 T G 5: 137,909,865 (GRCm39) T153P probably benign Het
Ddx24 A G 12: 103,374,743 (GRCm39) probably benign Het
Dido1 G A 2: 180,304,040 (GRCm39) T1288I possibly damaging Het
Dnajc13 A G 9: 104,106,208 (GRCm39) V322A possibly damaging Het
Dnajc25 T A 4: 59,017,693 (GRCm39) Y117* probably null Het
Dsg1a A G 18: 20,465,089 (GRCm39) N427D probably benign Het
Gabrq T G X: 71,871,151 (GRCm39) probably null Het
Glce A G 9: 61,977,883 (GRCm39) probably benign Het
Gm10477 T C X: 55,570,761 (GRCm39) L45P probably damaging Het
Htt T A 5: 35,048,825 (GRCm39) probably benign Het
Ift140 A G 17: 25,252,104 (GRCm39) E317G probably benign Het
Jak1 A G 4: 101,016,283 (GRCm39) M827T probably benign Het
Kalrn A G 16: 34,040,592 (GRCm39) V932A probably damaging Het
Mdm2 A C 10: 117,528,622 (GRCm39) S227R possibly damaging Het
Or14a259 T C 7: 86,013,074 (GRCm39) Y157C probably benign Het
Or4c111 A G 2: 88,843,470 (GRCm39) probably benign Het
Or5ak25 A G 2: 85,268,611 (GRCm39) V297A probably damaging Het
Or5g27 G A 2: 85,410,017 (GRCm39) V145I probably damaging Het
Or5w22 T C 2: 87,362,805 (GRCm39) F143L probably benign Het
Pdilt T G 7: 119,086,173 (GRCm39) E514A probably benign Het
Pepd A G 7: 34,645,028 (GRCm39) D153G probably damaging Het
Ptgis A T 2: 167,067,367 (GRCm39) V70E probably damaging Het
Rnf112 T C 11: 61,342,841 (GRCm39) K262E probably benign Het
Setd5 G T 6: 113,127,946 (GRCm39) G1300* probably null Het
Snx15 A G 19: 6,172,104 (GRCm39) L113P possibly damaging Het
Sptbn1 T C 11: 30,087,427 (GRCm39) D1004G probably damaging Het
Ston2 A C 12: 91,606,498 (GRCm39) *896G probably null Het
Suco A G 1: 161,655,274 (GRCm39) S1073P probably damaging Het
Susd1 A C 4: 59,369,636 (GRCm39) D344E possibly damaging Het
Trnt1 G T 6: 106,755,073 (GRCm39) probably null Het
Ttll12 A G 15: 83,466,264 (GRCm39) F399S probably damaging Het
Vmn1r124 C T 7: 20,994,467 (GRCm39) V26I probably benign Het
Vmn1r52 T A 6: 90,156,189 (GRCm39) N164K possibly damaging Het
Vmn1r56 A T 7: 5,199,335 (GRCm39) M94K possibly damaging Het
Zdhhc8 G A 16: 18,043,063 (GRCm39) S379F possibly damaging Het
Other mutations in Vmn1r80
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01610:Vmn1r80 APN 7 11,927,307 (GRCm39) missense possibly damaging 0.69
IGL01652:Vmn1r80 APN 7 11,927,063 (GRCm39) missense probably benign 0.19
IGL02165:Vmn1r80 APN 7 11,927,379 (GRCm39) missense probably benign 0.31
IGL02328:Vmn1r80 APN 7 11,927,405 (GRCm39) missense probably benign 0.12
IGL02336:Vmn1r80 APN 7 11,927,181 (GRCm39) missense probably benign 0.23
IGL02606:Vmn1r80 APN 7 11,926,959 (GRCm39) missense probably damaging 1.00
R0310:Vmn1r80 UTSW 7 11,927,775 (GRCm39) missense probably benign 0.00
R0399:Vmn1r80 UTSW 7 11,927,244 (GRCm39) missense possibly damaging 0.88
R1983:Vmn1r80 UTSW 7 11,927,588 (GRCm39) missense probably benign 0.01
R2079:Vmn1r80 UTSW 7 11,927,121 (GRCm39) missense probably damaging 1.00
R4278:Vmn1r80 UTSW 7 11,927,454 (GRCm39) missense probably benign 0.00
R4501:Vmn1r80 UTSW 7 11,927,318 (GRCm39) missense probably benign 0.39
R5894:Vmn1r80 UTSW 7 11,927,654 (GRCm39) missense probably damaging 0.99
R5991:Vmn1r80 UTSW 7 11,927,423 (GRCm39) missense probably benign 0.09
R6552:Vmn1r80 UTSW 7 11,927,684 (GRCm39) missense probably damaging 0.98
R7560:Vmn1r80 UTSW 7 11,927,750 (GRCm39) missense probably damaging 0.98
R7659:Vmn1r80 UTSW 7 11,926,977 (GRCm39) missense probably damaging 1.00
R8313:Vmn1r80 UTSW 7 11,926,994 (GRCm39) missense probably benign 0.00
R9171:Vmn1r80 UTSW 7 11,927,124 (GRCm39) missense possibly damaging 0.88
Z1189:Vmn1r80 UTSW 7 11,927,360 (GRCm39) missense probably damaging 0.99
Posted On 2015-04-16