Mutagenetix > Incidental Mutation

Incidental Mutation 'R9422:Zfp667'

712377

Institutional Source

Beutler Lab

Gene Symbol

Zfp667

Ensembl Gene

ENSMUSG00000054893

Gene Name

zinc finger protein 667

Synonyms

A830025F02Rik

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.073) question?

Stock #

R9422 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

6289578-6310882 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 6308321 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Methionine to Valine at position 330 (M330V)

Ref Sequence

ENSEMBL: ENSMUSP00000083507 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000086327] [ENSMUST00000108562] [ENSMUST00000153840] [ENSMUST00000170776]

AlphaFold

Q2TL60

Predicted Effect

probably benign
Transcript: ENSMUST00000086327
AA Change: M330V

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000083507
Gene: ENSMUSG00000054893
AA Change: M330V

Domain	Start	End	E-Value	Type
KRAB	14	74	4.77e-30	SMART
ZnF_C2H2	144	166	5.42e-2	SMART
ZnF_C2H2	172	194	3.11e-2	SMART
ZnF_C2H2	200	222	1.67e-2	SMART
ZnF_C2H2	253	275	2.57e-3	SMART
ZnF_C2H2	329	351	2.4e-3	SMART
ZnF_C2H2	357	379	3.16e-3	SMART
ZnF_C2H2	385	407	8.94e-3	SMART
ZnF_C2H2	414	436	5.06e-2	SMART
ZnF_C2H2	442	464	2.4e-3	SMART
ZnF_C2H2	470	492	5.29e-5	SMART
ZnF_C2H2	498	520	7.37e-4	SMART
ZnF_C2H2	526	548	1.38e-3	SMART
ZnF_C2H2	554	576	1.13e-4	SMART
ZnF_C2H2	582	604	1.38e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000108562
AA Change: M330V

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000104202
Gene: ENSMUSG00000054893
AA Change: M330V

Domain	Start	End	E-Value	Type
KRAB	14	74	4.77e-30	SMART
ZnF_C2H2	144	166	5.42e-2	SMART
ZnF_C2H2	172	194	3.11e-2	SMART
ZnF_C2H2	200	222	1.67e-2	SMART
ZnF_C2H2	253	275	2.57e-3	SMART
ZnF_C2H2	329	351	2.4e-3	SMART
ZnF_C2H2	357	379	3.16e-3	SMART
ZnF_C2H2	385	407	8.94e-3	SMART
ZnF_C2H2	414	436	5.06e-2	SMART
ZnF_C2H2	442	464	2.4e-3	SMART
ZnF_C2H2	470	492	5.29e-5	SMART
ZnF_C2H2	498	520	7.37e-4	SMART
ZnF_C2H2	526	548	1.38e-3	SMART
ZnF_C2H2	554	576	1.13e-4	SMART
ZnF_C2H2	582	604	1.38e-3	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000153840

Predicted Effect

probably benign
Transcript: ENSMUST00000170776
AA Change: M330V

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000128658
Gene: ENSMUSG00000054893
AA Change: M330V

Domain	Start	End	E-Value	Type
KRAB	14	74	4.77e-30	SMART
ZnF_C2H2	144	166	5.42e-2	SMART
ZnF_C2H2	172	194	3.11e-2	SMART
ZnF_C2H2	200	222	1.67e-2	SMART
ZnF_C2H2	253	275	2.57e-3	SMART
ZnF_C2H2	329	351	2.4e-3	SMART
ZnF_C2H2	357	379	3.16e-3	SMART
ZnF_C2H2	385	407	8.94e-3	SMART
ZnF_C2H2	414	436	5.06e-2	SMART
ZnF_C2H2	442	464	2.4e-3	SMART
ZnF_C2H2	470	492	5.29e-5	SMART
ZnF_C2H2	498	520	7.37e-4	SMART
ZnF_C2H2	526	548	1.38e-3	SMART
ZnF_C2H2	554	576	1.13e-4	SMART
ZnF_C2H2	582	604	1.38e-3	SMART

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 98.9%

Validation Efficiency

96% (55/57)

Allele List at MGI

All alleles(4) : Targeted, other(2) Gene trapped(2)

Other mutations in this stock

Total: 57 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930562C15Rik	G	A	16: 4,667,153 (GRCm39)	V209I		Het
Adamts18	T	A	8: 114,501,910 (GRCm39)	Y317F	probably damaging	Het
Adgrg6	C	T	10: 14,302,740 (GRCm39)	R863H	probably damaging	Het
Aipl1	C	T	11: 71,928,253 (GRCm39)	G11D	probably damaging	Het
Ank2	C	A	3: 126,890,505 (GRCm39)	K55N	unknown	Het
B3galnt2	A	G	13: 14,150,136 (GRCm39)	T160A	probably benign	Het
Becn1	C	A	11: 101,192,832 (GRCm39)		probably benign	Het
Ccdc57	T	C	11: 120,764,444 (GRCm39)	N777S	possibly damaging	Het
Cd302	T	C	2: 60,082,697 (GRCm39)	Y209C	probably damaging	Het
Cfap69	A	G	5: 5,699,851 (GRCm39)	V63A	probably benign	Het
Clasp1	T	A	1: 118,390,257 (GRCm39)	I147N	possibly damaging	Het
Cmtm3	A	T	8: 105,067,358 (GRCm39)		probably benign	Het
Cmtm3	G	T	8: 105,067,359 (GRCm39)		probably benign	Het
Col15a1	A	T	4: 47,293,364 (GRCm39)		probably null	Het
Csn3	A	G	5: 88,077,872 (GRCm39)	N126S	probably benign	Het
Dcp2	C	T	18: 44,538,361 (GRCm39)	R173C	probably damaging	Het
Dctn1	T	A	6: 83,170,691 (GRCm39)	H729Q	possibly damaging	Het
Dop1a	C	T	9: 86,425,093 (GRCm39)	H2138Y	probably damaging	Het
Fbxo2	T	C	4: 148,248,616 (GRCm39)	L36P	unknown	Het
Gzmg	T	A	14: 56,395,812 (GRCm39)	Y49F	probably benign	Het
H2bc3	A	G	13: 23,930,940 (GRCm39)	I55V	possibly damaging	Het
Hivep1	A	G	13: 42,313,213 (GRCm39)	T1818A	probably benign	Het
Ipmk	T	C	10: 71,212,550 (GRCm39)	S171P	possibly damaging	Het
Milr1	T	A	11: 106,657,805 (GRCm39)	Y239N	probably damaging	Het
Muc16	T	C	9: 18,553,102 (GRCm39)	N4397S	probably benign	Het
Nell1	C	A	7: 49,712,387 (GRCm39)	S69*	probably null	Het
Nme8	A	G	13: 19,859,918 (GRCm39)	V234A	probably benign	Het
Notch2	A	G	3: 98,054,668 (GRCm39)	S2444G	probably damaging	Het
Odad3	T	A	9: 21,913,628 (GRCm39)	H48L	possibly damaging	Het
Or5p75-ps1	A	T	7: 108,108,155 (GRCm39)	K297N	unknown	Het
Or7g35	T	A	9: 19,495,968 (GRCm39)	I45K	probably damaging	Het
Pex5l	T	C	3: 33,136,401 (GRCm39)		probably benign	Het
Pgm3	A	T	9: 86,443,938 (GRCm39)	L322H	probably damaging	Het
Plxna2	T	A	1: 194,326,730 (GRCm39)	F221L	probably damaging	Het
Pramel22	T	A	4: 143,382,982 (GRCm39)	K79M	probably damaging	Het
Prkaa2	A	G	4: 104,909,195 (GRCm39)	I83T	probably benign	Het
R3hdml	A	G	2: 163,334,526 (GRCm39)	T39A	probably benign	Het
Ralgds	A	G	2: 28,435,184 (GRCm39)	M447V	probably benign	Het
Rgs2	T	C	1: 143,878,783 (GRCm39)	D40G	probably damaging	Het
Robo3	T	C	9: 37,329,789 (GRCm39)	M1176V	probably benign	Het
Rpap1	G	A	2: 119,613,519 (GRCm39)		probably benign	Het
Skic3	A	T	13: 76,278,447 (GRCm39)		probably benign	Het
Slc26a8	T	C	17: 28,857,560 (GRCm39)	D861G	possibly damaging	Het
Slc4a8	A	T	15: 100,698,469 (GRCm39)	I705F	probably benign	Het
Slco3a1	C	T	7: 73,946,996 (GRCm39)	V576I	probably damaging	Het
Socs7	A	G	11: 97,253,973 (GRCm39)	D169G	possibly damaging	Het
Tanc1	T	C	2: 59,637,933 (GRCm39)	V878A	probably benign	Het
Thop1	C	T	10: 80,916,001 (GRCm39)	R395W	probably damaging	Het
Tpp2	T	A	1: 44,017,897 (GRCm39)	H765Q	probably benign	Het
Vipr1	G	A	9: 121,471,993 (GRCm39)		probably null	Het
Vmn1r233	T	A	17: 21,214,069 (GRCm39)	M294L	possibly damaging	Het
Vmn1r27	T	C	6: 58,192,867 (GRCm39)	T46A	probably benign	Het
Vmn2r28	A	G	7: 5,483,747 (GRCm39)	S818P	probably damaging	Het
Vmn2r97	T	A	17: 19,149,333 (GRCm39)	N240K	probably benign	Het
Zfhx3	C	T	8: 109,430,850 (GRCm39)		probably benign	Het
Zhx1	T	C	15: 57,916,071 (GRCm39)	Y725C	probably damaging	Het
Zhx3	C	T	2: 160,624,020 (GRCm39)	S49N	probably benign	Het

Other mutations in Zfp667

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00821:Zfp667	APN	7	6,308,396 (GRCm39)	missense	possibly damaging	0.53
IGL01325:Zfp667	APN	7	6,293,545 (GRCm39)	missense	probably damaging	1.00
IGL01386:Zfp667	APN	7	6,307,869 (GRCm39)	missense	probably benign	0.00
IGL01960:Zfp667	APN	7	6,308,336 (GRCm39)	missense	probably benign	0.00
IGL03394:Zfp667	APN	7	6,292,438 (GRCm39)	critical splice donor site	probably null
B5639:Zfp667	UTSW	7	6,293,544 (GRCm39)	missense	probably damaging	1.00
R0458:Zfp667	UTSW	7	6,307,844 (GRCm39)	missense	probably benign	0.40
R0845:Zfp667	UTSW	7	6,309,091 (GRCm39)	missense	possibly damaging	0.85
R1768:Zfp667	UTSW	7	6,308,066 (GRCm39)	missense	possibly damaging	0.53
R1953:Zfp667	UTSW	7	6,308,087 (GRCm39)	missense	probably benign	0.04
R2023:Zfp667	UTSW	7	6,308,416 (GRCm39)	missense	possibly damaging	0.85
R3159:Zfp667	UTSW	7	6,308,999 (GRCm39)	missense	probably damaging	1.00
R4080:Zfp667	UTSW	7	6,308,105 (GRCm39)	missense	possibly damaging	0.71
R4476:Zfp667	UTSW	7	6,307,598 (GRCm39)	missense	possibly damaging	0.53
R4584:Zfp667	UTSW	7	6,293,624 (GRCm39)	missense	possibly damaging	0.84
R4783:Zfp667	UTSW	7	6,308,684 (GRCm39)	missense	possibly damaging	0.83
R5037:Zfp667	UTSW	7	6,308,949 (GRCm39)	missense	possibly damaging	0.71
R5300:Zfp667	UTSW	7	6,307,635 (GRCm39)	missense	probably benign
R5311:Zfp667	UTSW	7	6,308,715 (GRCm39)	missense	probably benign	0.10
R5312:Zfp667	UTSW	7	6,308,466 (GRCm39)	missense	probably benign
R5340:Zfp667	UTSW	7	6,308,252 (GRCm39)	missense	possibly damaging	0.53
R6262:Zfp667	UTSW	7	6,307,973 (GRCm39)	missense	probably benign	0.03
R7386:Zfp667	UTSW	7	6,308,949 (GRCm39)	missense	possibly damaging	0.86
R8383:Zfp667	UTSW	7	6,308,370 (GRCm39)	missense	probably damaging	0.98
R8919:Zfp667	UTSW	7	6,308,256 (GRCm39)	missense	possibly damaging	0.53
R9099:Zfp667	UTSW	7	6,308,322 (GRCm39)	missense	probably benign	0.00
Z1177:Zfp667	UTSW	7	6,307,856 (GRCm39)	missense	possibly damaging	0.91

Predicted Primers

PCR Primer
(F):5'- GTCTTCAGTCGGATGTCATCC -3'
(R):5'- GGATGAAAGGCGACTACACACC -3'

Sequencing Primer
(F):5'- CCCTTTTACTTCATAAGAGGAGTCAC -3'
(R):5'- ACACTTGCTGCACTTAAACTG -3'

Posted On

2022-05-16