Mutagenetix > Incidental Mutation

Incidental Mutation 'R9573:Tmem219'

722117

Institutional Source

Beutler Lab

Gene Symbol

Tmem219

Ensembl Gene

ENSMUSG00000060538

Gene Name

transmembrane protein 219

Synonyms

2900045G02Rik, 1110032O16Rik

MMRRC Submission

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.072) question?

Stock #

R9573 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

126485343-126522089 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 126490933 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Asparagine at position 175 (Y175N)

Ref Sequence

ENSEMBL: ENSMUSP00000113647 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000032926] [ENSMUST00000119781] [ENSMUST00000120007] [ENSMUST00000121532] [ENSMUST00000121612] [ENSMUST00000134134]

AlphaFold

Q9D123

Predicted Effect

probably damaging
Transcript: ENSMUST00000032926
AA Change: Y143N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000032926
Gene: ENSMUSG00000060538
AA Change: Y143N

Domain	Start	End	E-Value	Type
Pfam:TMEM219	10	193	4.8e-51	PFAM
transmembrane domain	205	227	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000119781
AA Change: Y168N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000114040
Gene: ENSMUSG00000060538
AA Change: Y168N

Domain	Start	End	E-Value	Type
Pfam:TMEM219	35	218	6.5e-51	PFAM
transmembrane domain	230	252	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000120007
AA Change: Y175N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000113647
Gene: ENSMUSG00000060538
AA Change: Y175N

Domain	Start	End	E-Value	Type
low complexity region	5	20	N/A	INTRINSIC
Pfam:TMEM219	42	119	1.1e-12	PFAM
Pfam:TMEM219	116	216	1.6e-9	PFAM
low complexity region	217	232	N/A	INTRINSIC
transmembrane domain	237	259	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000121532
AA Change: Y143N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000112485
Gene: ENSMUSG00000060538
AA Change: Y143N

Domain	Start	End	E-Value	Type
Pfam:TMEM219	10	193	4.8e-51	PFAM
transmembrane domain	205	227	N/A	INTRINSIC

Predicted Effect

probably damaging
Transcript: ENSMUST00000121612
AA Change: Y72N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000113260
Gene: ENSMUSG00000060538
AA Change: Y72N

Domain	Start	End	E-Value	Type
Pfam:TMEM219	1	122	1e-28	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000134134
AA Change: Y169N

PolyPhen 2 Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)

SMART Domains

Protein: ENSMUSP00000116806
Gene: ENSMUSG00000060538
AA Change: Y169N

Domain	Start	End	E-Value	Type
Pfam:TMEM219	36	219	3.3e-52	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000154174

Predicted Effect

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.6%
20x: 98.9%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Mice homozygous for a knock-out allele exhibit attenuated IL13 responsiveness, increased susceptibility to exposure to 100% oxygen, and reduced lung metastasis of B16-F10 melanoma cells. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 67 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Afdn	T	A	17: 14,050,229 (GRCm39)	V472E	probably damaging	Het
Ak3	T	C	19: 29,003,667 (GRCm39)	I170V	probably benign	Het
Ank3	T	A	10: 69,791,977 (GRCm39)	L1058*	probably null	Het
Ankrd60	A	G	2: 173,410,791 (GRCm39)	V243A	possibly damaging	Het
Apol11b	C	T	15: 77,524,771 (GRCm39)	E5K	possibly damaging	Het
Arid3c	T	G	4: 41,726,003 (GRCm39)	E200A	probably benign	Het
Astn2	T	G	4: 65,566,591 (GRCm39)	I856L	probably benign	Het
Bcs1l	C	A	1: 74,629,492 (GRCm39)	R177S	probably damaging	Het
Bin2	A	T	15: 100,560,433 (GRCm39)	F43I	probably damaging	Het
Braf	A	G	6: 39,600,544 (GRCm39)	L691P	probably damaging	Het
Bud23	C	T	5: 135,082,274 (GRCm39)	V266I	possibly damaging	Het
Casp12	A	T	9: 5,354,629 (GRCm39)	I333L	probably benign	Het
Cavin2	T	A	1: 51,328,795 (GRCm39)	I84N	probably damaging	Het
Ccdc168	A	C	1: 44,095,307 (GRCm39)	Y1930*	probably null	Het
Ccdc196	A	T	12: 78,244,098 (GRCm39)	N17I		Het
Cep170b	T	A	12: 112,691,154 (GRCm39)	F24I	probably damaging	Het
Chd9	A	G	8: 91,704,302 (GRCm39)	Y719C	unknown	Het
Commd7	A	G	2: 153,463,981 (GRCm39)	M137T	probably damaging	Het
Dmbt1	G	A	7: 130,657,910 (GRCm39)		probably null	Het
Dnah12	A	C	14: 26,414,619 (GRCm39)	T7P	probably benign	Het
Elapor1	A	T	3: 108,373,094 (GRCm39)	I548N	probably damaging	Het
Endod1	A	T	9: 14,292,247 (GRCm39)	L7Q	probably damaging	Het
Galnt14	C	T	17: 73,802,662 (GRCm39)	V477M	probably damaging	Het
Glis2	C	T	16: 4,429,505 (GRCm39)	R211C	probably damaging	Het
Gm4744	A	T	6: 40,925,497 (GRCm39)	V122D		Het
Gm4952	G	A	19: 12,604,090 (GRCm39)	M167I	probably benign	Het
Hyal4	T	C	6: 24,756,508 (GRCm39)	V242A	possibly damaging	Het
Ift122	T	G	6: 115,857,646 (GRCm39)	S131A	probably benign	Het
Il4ra	T	A	7: 125,169,158 (GRCm39)	S137T	possibly damaging	Het
Lcor	T	A	19: 41,573,471 (GRCm39)	L742Q	probably damaging	Het
Lpin2	A	G	17: 71,538,185 (GRCm39)	K315R	probably benign	Het
Map3k6	T	C	4: 132,979,774 (GRCm39)	Y1258H	probably damaging	Het
Mapk9	A	T	11: 49,769,239 (GRCm39)	K290N	probably damaging	Het
Mfhas1	C	T	8: 36,143,903 (GRCm39)	H1045Y	possibly damaging	Het
Ndufaf7	C	A	17: 79,246,036 (GRCm39)	Q90K	probably damaging	Het
Nlrc3	A	T	16: 3,771,841 (GRCm39)	V157E	probably benign	Het
Npas4	A	G	19: 5,035,837 (GRCm39)	F776L	probably benign	Het
Nuggc	A	C	14: 65,848,603 (GRCm39)	D184A	probably benign	Het
Ogdhl	A	G	14: 32,066,678 (GRCm39)	E795G	probably damaging	Het
Or5a1	A	G	19: 12,097,509 (GRCm39)	I189T	probably damaging	Het
Or9a2	T	G	6: 41,748,940 (GRCm39)	I98L	probably benign	Het
Pcbp1	A	T	6: 86,502,677 (GRCm39)	M74K	possibly damaging	Het
Plk4	A	G	3: 40,763,257 (GRCm39)	D476G	probably benign	Het
Prox2	G	A	12: 85,141,766 (GRCm39)	Q146*	probably null	Het
Rab44	A	T	17: 29,364,277 (GRCm39)	Y617F	unknown	Het
Rabepk	T	C	2: 34,675,627 (GRCm39)	R168G	probably benign	Het
Rbmyf9	T	A	Y: 3,775,370 (GRCm39)	M40K	possibly damaging	Het
Rif1	T	G	2: 52,000,466 (GRCm39)	S1307A	probably benign	Het
Ror2	C	T	13: 53,265,467 (GRCm39)	V542I	probably benign	Het
Rtp1	A	G	16: 23,250,159 (GRCm39)	I175V	possibly damaging	Het
Slc11a2	T	A	15: 100,304,225 (GRCm39)	I158F	probably damaging	Het
Slc24a3	T	G	2: 145,455,548 (GRCm39)	M479R	probably damaging	Het
Slc4a9	T	C	18: 36,668,589 (GRCm39)	F723S	probably damaging	Het
Syne2	C	A	12: 75,927,134 (GRCm39)	N93K	probably damaging	Het
Sytl2	A	G	7: 90,057,599 (GRCm39)	Q846R	probably damaging	Het
Tas2r116	A	C	6: 132,833,140 (GRCm39)	H247P	probably benign	Het
Tcstv3	T	C	13: 120,779,130 (GRCm39)	S10P	probably damaging	Het
Tgm7	T	C	2: 120,934,606 (GRCm39)	N124S	probably benign	Het
Tnfrsf18	G	A	4: 156,112,484 (GRCm39)	G114S	possibly damaging	Het
Trim38	G	A	13: 23,966,688 (GRCm39)	C45Y	probably benign	Het
Tshz1	T	C	18: 84,032,404 (GRCm39)	E668G	probably benign	Het
Ubr4	T	A	4: 139,148,450 (GRCm39)	M382K		Het
Vps39	T	C	2: 120,155,179 (GRCm39)	E549G	possibly damaging	Het
Wdr35	G	A	12: 9,078,014 (GRCm39)	G1135D	probably benign	Het
Zbtb46	A	G	2: 181,053,548 (GRCm39)	L388P	probably benign	Het
Zdhhc25	T	A	15: 88,485,307 (GRCm39)	M214K	probably damaging	Het
Zfp735	G	A	11: 73,602,936 (GRCm39)	E627K	possibly damaging	Het

Other mutations in Tmem219

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01759:Tmem219	APN	7	126,496,310 (GRCm39)	missense	probably damaging	1.00
IGL02186:Tmem219	APN	7	126,495,988 (GRCm39)	missense	probably benign	0.02
IGL02742:Tmem219	APN	7	126,496,220 (GRCm39)	missense	probably damaging	1.00
IGL02836:Tmem219	APN	7	126,488,121 (GRCm39)	missense	probably benign	0.33
R1971:Tmem219	UTSW	7	126,496,422 (GRCm39)	missense	probably benign	0.18
R2412:Tmem219	UTSW	7	126,495,939 (GRCm39)	missense	probably damaging	0.99
R6347:Tmem219	UTSW	7	126,495,998 (GRCm39)	missense	possibly damaging	0.94
R7078:Tmem219	UTSW	7	126,490,975 (GRCm39)	missense	probably damaging	1.00
R7095:Tmem219	UTSW	7	126,490,928 (GRCm39)	missense	probably damaging	0.99
R7385:Tmem219	UTSW	7	126,495,947 (GRCm39)	missense	probably damaging	0.99
R9372:Tmem219	UTSW	7	126,496,017 (GRCm39)	missense	possibly damaging	0.69
Z1088:Tmem219	UTSW	7	126,490,846 (GRCm39)	missense	possibly damaging	0.58

Predicted Primers

PCR Primer
(F):5'- TCAACCTAGGCACTTACTGAAG -3'
(R):5'- GTCCAGCAATTTGAAACAGAGTG -3'

Sequencing Primer
(F):5'- TTACTGAAGTAAGGAGCTCGGTG -3'
(R):5'- AACTCACTTGGTAGACTAGGCTG -3'

Posted On

2022-08-09