Mutagenetix > Incidental Mutations

Incidental Mutation 'R0285:Folh1'

24670

Institutional Source

Beutler Lab

Gene Symbol

Folh1

Ensembl Gene

ENSMUSG00000001773

Gene Name

folate hydrolase 1

Synonyms

prostate-specific membrane antigen, glutamate carboxypeptidase II, mopsm, GCP2

MMRRC Submission

038506-MU

Accession Numbers

Is this an essential gene?

Non essential (E-score: 0.000) question?

Stock #

R0285 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

86718977-86775943 bp(-) (GRCm38)

Type of Mutation

splice site

DNA Base Change (assembly)

A to G at 86742165 bp

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000102892 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000001824] [ENSMUST00000107271]

Predicted Effect

probably benign
Transcript: ENSMUST00000001824

SMART Domains

Protein: ENSMUSP00000001824
Gene: ENSMUSG00000001773

Domain	Start	End	E-Value	Type
transmembrane domain	20	42	N/A	INTRINSIC
Pfam:PA	171	264	2.5e-16	PFAM
Pfam:Peptidase_M28	359	561	1.2e-18	PFAM
Pfam:TFR_dimer	629	749	1.6e-37	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000107271

SMART Domains

Protein: ENSMUSP00000102892
Gene: ENSMUSG00000001773

Domain	Start	End	E-Value	Type
transmembrane domain	20	42	N/A	INTRINSIC
Pfam:PA	167	265	7e-18	PFAM
Pfam:Peptidase_M28	339	475	2.1e-15	PFAM
Pfam:TFR_dimer	595	718	1.1e-43	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000209082

Coding Region Coverage

1x: 99.0%
3x: 98.1%
10x: 96.1%
20x: 92.9%

Validation Efficiency

99% (80/81)

MGI Phenotype

PHENOTYPE: Homozygous mutation of this gene results in protection from peripheral neuropathy and ischemic brain injury. Homozygotes for a null allele show increased food intake, anxiety-like behavior, smaller sciatic nerve axons, and impaired angiogenesis. Homozygotes for a different null allele show less neuron degeneration and astrocyte damage after traumatic brain injury. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 78 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700011I03Rik	G	A	18: 57,533,865	G5S	probably damaging	Het
Acy3	A	G	19: 3,988,193	E162G	probably benign	Het
Angptl1	T	C	1: 156,845,215	S204P	probably benign	Het
Atf6b	C	T	17: 34,650,396		probably benign	Het
Card11	G	A	5: 140,887,101	S619F	probably damaging	Het
Ccl11	G	A	11: 82,062,258	V81I	probably damaging	Het
Cds1	T	C	5: 101,797,038	I126T	probably damaging	Het
Chd1	A	G	17: 17,374,680		probably benign	Het
Cndp1	C	A	18: 84,618,238	V384F	possibly damaging	Het
Cuta	A	G	17: 26,939,449		probably null	Het
Diaph3	G	A	14: 87,115,024	T47I	possibly damaging	Het
Dopey1	A	T	9: 86,512,639	S598C	probably damaging	Het
Dsp	A	G	13: 38,172,794	M217V	probably benign	Het
Esyt1	T	A	10: 128,512,218	I898F	possibly damaging	Het
Fam189a2	G	A	19: 23,979,385		probably benign	Het
Fam205a1	G	A	4: 42,850,236	T640M	probably benign	Het
Fam84b	T	C	15: 60,822,967	H310R	probably benign	Het
Fgd3	A	T	13: 49,263,948	W680R	possibly damaging	Het
Fuk	G	C	8: 110,893,717	H235Q	probably benign	Het
Gadl1	C	A	9: 116,030,738		probably benign	Het
Garem1	A	G	18: 21,129,612	M715T	probably benign	Het
Gpd2	A	T	2: 57,338,955	D257V	probably benign	Het
Hdac7	A	G	15: 97,798,222		probably null	Het
Heatr5b	A	G	17: 78,808,453	M858T	probably benign	Het
Inpp4b	A	T	8: 82,034,516		probably benign	Het
Iqgap3	G	T	3: 88,096,990	C461F	probably benign	Het
Lamb1	C	A	12: 31,326,645	C559*	probably null	Het
Lrrc31	T	C	3: 30,684,948	N308S	probably benign	Het
Ly75	T	C	2: 60,318,319	Y1222C	probably damaging	Het
Map3k10	C	A	7: 27,673,900	R42L	probably benign	Het
Meioc	A	G	11: 102,672,191	T72A	probably benign	Het
Miox	C	T	15: 89,336,274	L189F	possibly damaging	Het
Mmp11	T	C	10: 75,925,668	Y366C	probably damaging	Het
N4bp2	T	A	5: 65,806,559	D650E	probably benign	Het
Ncoa6	TGC	TGCGC	2: 155,408,291		probably null	Het
Ncoa6	T	C	2: 155,415,701	M641V	probably damaging	Het
Nol4l	G	A	2: 153,483,853		probably benign	Het
Notch1	T	G	2: 26,460,861	D2089A	possibly damaging	Het
Olfr1156	A	G	2: 87,950,131	I34T	probably damaging	Het
Olfr1419	A	G	19: 11,871,138	L26P	probably damaging	Het
Olfr1449	A	T	19: 12,935,172	M145L	probably benign	Het
Olfr155	G	A	4: 43,854,398	V30M	possibly damaging	Het
Olfr493	A	G	7: 108,346,499	S161P	probably benign	Het
Olfr649	A	T	7: 104,189,324	Y294*	probably null	Het
Olfr930	T	A	9: 38,930,774	I201N	possibly damaging	Het
Otof	C	T	5: 30,379,533		probably null	Het
Paox	T	C	7: 140,129,140	F324L	probably damaging	Het
Pycr1	A	T	11: 120,640,316	I277N	probably benign	Het
R3hcc1l	A	T	19: 42,576,129	H627L	probably damaging	Het
Rab21	G	A	10: 115,290,863	S193L	probably benign	Het
Ralgds	T	G	2: 28,550,569		probably null	Het
Rbm42	A	G	7: 30,645,840	S169P	possibly damaging	Het
Rfpl4	A	G	7: 5,110,378	V262A	probably benign	Het
Rhobtb3	A	G	13: 75,877,509	I496T	possibly damaging	Het
Rnf31	G	A	14: 55,601,389	A901T	probably damaging	Het
Ryr2	T	C	13: 11,716,977	D2359G	probably damaging	Het
Sgo2b	A	C	8: 63,928,789	Y336*	probably null	Het
Slc16a7	T	A	10: 125,294,631	I62L	probably benign	Het
Slc22a21	A	T	11: 53,959,196		probably benign	Het
Slc25a21	A	G	12: 56,858,025		probably null	Het
Slc5a4b	T	C	10: 76,062,283	I532M	probably damaging	Het
Srrm4	C	A	5: 116,467,789		probably benign	Het
Stxbp1	C	A	2: 32,823,542	E27D	probably benign	Het
Sult2a5	T	A	7: 13,628,760	Y131N	probably damaging	Het
Svopl	T	C	6: 37,984,522	Q492R	probably benign	Het
Tmem144	G	A	3: 79,839,273		probably benign	Het
Tmem87a	A	G	2: 120,394,424	S119P	probably benign	Het
Tmprss11c	A	G	5: 86,271,430	L90P	probably damaging	Het
Tmprss6	T	A	15: 78,452,868	D346V	probably damaging	Het
Ubr4	A	C	4: 139,440,801	S2820R	probably damaging	Het
Usp4	T	C	9: 108,378,564	V607A	probably benign	Het
Usp45	A	G	4: 21,798,603		probably null	Het
Vill	C	T	9: 119,070,827		probably benign	Het
Vmn1r13	C	A	6: 57,209,994	T46N	probably benign	Het
Vmn2r107	A	G	17: 20,345,611	T63A	probably benign	Het
Vmn2r82	T	A	10: 79,396,557	W797R	probably damaging	Het
Washc2	T	A	6: 116,221,839	D287E	probably damaging	Het
Xpc	G	A	6: 91,498,064	L660F	probably damaging	Het

Other mutations in Folh1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00504:Folh1	APN	7	86734143	missense	probably damaging	1.00
IGL00531:Folh1	APN	7	86719769	missense	possibly damaging	0.82
IGL00772:Folh1	APN	7	86731784	missense	probably damaging	1.00
IGL01339:Folh1	APN	7	86726098	missense	probably damaging	1.00
IGL01373:Folh1	APN	7	86746142	missense	probably benign	0.39
IGL01645:Folh1	APN	7	86742227	missense	probably damaging	1.00
IGL01736:Folh1	APN	7	86742236	missense	possibly damaging	0.96
IGL02104:Folh1	APN	7	86744430	missense	possibly damaging	0.93
IGL02124:Folh1	APN	7	86725418	missense	probably damaging	0.99
IGL02338:Folh1	APN	7	86736515	splice site	probably benign
IGL02440:Folh1	APN	7	86734104	missense	probably benign	0.09
IGL02689:Folh1	APN	7	86763045	splice site	probably null
IGL02976:Folh1	APN	7	86762918	missense	probably benign
IGL03022:Folh1	APN	7	86746171	missense	possibly damaging	0.76
R0090:Folh1	UTSW	7	86725868	splice site	probably benign
R0482:Folh1	UTSW	7	86746101	splice site	probably benign
R0492:Folh1	UTSW	7	86746192	missense	probably damaging	1.00
R1079:Folh1	UTSW	7	86771881	missense	probably damaging	1.00
R1148:Folh1	UTSW	7	86761730	missense	probably damaging	1.00
R1148:Folh1	UTSW	7	86761730	missense	probably damaging	1.00
R1493:Folh1	UTSW	7	86761730	missense	probably damaging	1.00
R1778:Folh1	UTSW	7	86761699	critical splice donor site	probably null
R1865:Folh1	UTSW	7	86725906	missense	possibly damaging	0.65
R1878:Folh1	UTSW	7	86771742	missense	probably benign
R1906:Folh1	UTSW	7	86742166	splice site	probably null
R1912:Folh1	UTSW	7	86762967	missense	possibly damaging	0.95
R2263:Folh1	UTSW	7	86719765	missense	probably benign
R3001:Folh1	UTSW	7	86723311	missense	probably damaging	1.00
R3002:Folh1	UTSW	7	86723311	missense	probably damaging	1.00
R3883:Folh1	UTSW	7	86775656	missense	possibly damaging	0.48
R4061:Folh1	UTSW	7	86756962	missense	possibly damaging	0.49
R4277:Folh1	UTSW	7	86762915	critical splice donor site	probably null
R4507:Folh1	UTSW	7	86757008	missense	probably benign
R4627:Folh1	UTSW	7	86773252	missense	probably benign	0.00
R4652:Folh1	UTSW	7	86744425	nonsense	probably null
R4653:Folh1	UTSW	7	86744425	nonsense	probably null
R4745:Folh1	UTSW	7	86723274	critical splice donor site	probably null
R5571:Folh1	UTSW	7	86734120	missense	probably damaging	1.00
R6000:Folh1	UTSW	7	86725934	missense	probably benign	0.01
R6307:Folh1	UTSW	7	86723309	missense	probably damaging	1.00
R6474:Folh1	UTSW	7	86775756	missense	probably damaging	0.99
R7112:Folh1	UTSW	7	86775637	critical splice donor site	probably null
R7131:Folh1	UTSW	7	86726112	missense	probably damaging	1.00
R7449:Folh1	UTSW	7	86731748	missense	probably benign	0.00
R7494:Folh1	UTSW	7	86719699	missense	probably damaging	1.00
R7539:Folh1	UTSW	7	86725909	missense	probably benign	0.35
R7764:Folh1	UTSW	7	86762918	missense	probably benign
R7803:Folh1	UTSW	7	86726098	missense	probably damaging	1.00
R8105:Folh1	UTSW	7	86746146	missense	probably damaging	1.00
R8208:Folh1	UTSW	7	86725917	missense	probably damaging	0.98
R8347:Folh1	UTSW	7	86729118	nonsense	probably null
RF007:Folh1	UTSW	7	86775687	missense	probably benign
Z1088:Folh1	UTSW	7	86725954	missense	probably benign	0.00
Z1177:Folh1	UTSW	7	86744447	missense	probably damaging	1.00
Z1177:Folh1	UTSW	7	86761822	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- ATTTAGTGCCtgtatgtgtgttttgtgaac -3'
(R):5'- AGTCTTCAGCATTTTGTGATTTCCCATCTT -3'

Sequencing Primer
(F):5'- cagccaagtaataggtatgaatgtag -3'
(R):5'- TTTAGGACGGAGGCCTAGAA -3'

Posted On

2013-04-16