Mutagenetix > Incidental Mutation

Incidental Mutation 'R5286:Zbtb2'

424362

Institutional Source

Beutler Lab

Gene Symbol

Zbtb2

Ensembl Gene

ENSMUSG00000075327

Gene Name

zinc finger and BTB domain containing 2

Synonyms

LOC381990

MMRRC Submission

042870-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.893) question?

Stock #

R5286 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

4317075-4338108 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to T at 4318566 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glycine to Serine at position 487 (G487S)

Ref Sequence

ENSEMBL: ENSMUSP00000097656 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000100077] [ENSMUST00000100078]

AlphaFold

Q3V3W4

Predicted Effect

possibly damaging
Transcript: ENSMUST00000100077
AA Change: G487S

PolyPhen 2 Score 0.662 (Sensitivity: 0.86; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000097655
Gene: ENSMUSG00000075327
AA Change: G487S

Domain	Start	End	E-Value	Type
BTB	24	117	1.45e-12	SMART
low complexity region	201	220	N/A	INTRINSIC
ZnF_C2H2	254	276	4.87e-4	SMART
ZnF_C2H2	363	385	4.24e-4	SMART
ZnF_C2H2	390	410	1.06e2	SMART
ZnF_C2H2	448	468	2.41e1	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000100078
AA Change: G487S

PolyPhen 2 Score 0.662 (Sensitivity: 0.86; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000097656
Gene: ENSMUSG00000075327
AA Change: G487S

Domain	Start	End	E-Value	Type
BTB	24	117	1.45e-12	SMART
low complexity region	201	220	N/A	INTRINSIC
ZnF_C2H2	254	276	4.87e-4	SMART
ZnF_C2H2	363	385	4.24e-4	SMART
ZnF_C2H2	390	410	1.06e2	SMART
ZnF_C2H2	448	468	2.41e1	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000215860

Meta Mutation Damage Score

0.0719

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.4%
20x: 95.7%

Validation Efficiency

100% (64/64)

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acad12	T	C	5: 121,742,358 (GRCm39)	I417V	probably benign	Het
Adad1	T	C	3: 37,119,399 (GRCm39)	V160A	possibly damaging	Het
Adcy7	A	G	8: 89,051,487 (GRCm39)	E869G	probably damaging	Het
Birc6	G	A	17: 74,977,242 (GRCm39)	A4352T	probably damaging	Het
Brd2	T	A	17: 34,334,205 (GRCm39)	T286S	probably damaging	Het
Bsn	G	T	9: 107,988,123 (GRCm39)		probably benign	Het
Cables1	A	G	18: 12,057,884 (GRCm39)	T335A	probably benign	Het
Cacna1d	A	T	14: 30,072,682 (GRCm39)	S98T	possibly damaging	Het
Ccdc181	A	G	1: 164,105,810 (GRCm39)	Y15C	probably damaging	Het
Dlgap4	T	G	2: 156,587,839 (GRCm39)	V39G	probably damaging	Het
Epb41l3	G	A	17: 69,569,268 (GRCm39)	R504H	probably benign	Het
Fbxo7	T	C	10: 85,857,954 (GRCm39)	L23P	probably damaging	Het
Gm42791	A	C	5: 148,887,178 (GRCm39)		probably benign	Het
Gprc5b	A	T	7: 118,582,910 (GRCm39)	F320I	possibly damaging	Het
Gtf3c1	G	A	7: 125,262,580 (GRCm39)	T1093M	possibly damaging	Het
Hddc3	G	T	7: 79,993,543 (GRCm39)	R83L	probably damaging	Het
Iars2	T	C	1: 185,055,318 (GRCm39)		probably benign	Het
Ift25	T	A	4: 107,136,998 (GRCm39)	I132N	probably damaging	Het
Igfn1	T	C	1: 135,895,599 (GRCm39)	K1656E	probably benign	Het
Itk	A	C	11: 46,228,926 (GRCm39)		probably null	Het
Klra6	G	A	6: 129,995,932 (GRCm39)	T142I	probably benign	Het
Knop1	C	T	7: 118,454,993 (GRCm39)	A3T	probably damaging	Het
Lamc3	A	G	2: 31,808,608 (GRCm39)	H788R	probably damaging	Het
Lrif1	A	G	3: 106,639,859 (GRCm39)	R315G	probably damaging	Het
Mfap3l	A	G	8: 61,109,903 (GRCm39)	D93G	probably benign	Het
Ngef	T	C	1: 87,473,552 (GRCm39)	S77G	probably benign	Het
Nt5dc3	T	C	10: 86,640,656 (GRCm39)	S13P	probably benign	Het
Or9s13	T	C	1: 92,548,084 (GRCm39)	V152A	probably benign	Het
Pclo	T	C	5: 14,729,761 (GRCm39)		probably benign	Het
Pkhd1l1	C	T	15: 44,378,368 (GRCm39)	Q1041*	probably null	Het
Ppl	G	A	16: 4,906,987 (GRCm39)	R1103*	probably null	Het
Ppp4r3b	T	A	11: 29,161,667 (GRCm39)	D680E	probably benign	Het
Rasgrf2	T	G	13: 92,267,941 (GRCm39)	K21T	possibly damaging	Het
Rev1	T	A	1: 38,094,407 (GRCm39)	K1004*	probably null	Het
Rgs9	T	G	11: 109,130,277 (GRCm39)		probably null	Het
Rnf31	T	C	14: 55,829,693 (GRCm39)	L86P	probably damaging	Het
Rps13	A	G	7: 115,933,155 (GRCm39)	Y18H	probably damaging	Het
Rxfp2	T	C	5: 149,958,909 (GRCm39)	F33S	probably damaging	Het
Sfmbt1	G	A	14: 30,538,777 (GRCm39)	V799M	probably damaging	Het
Stard9	T	A	2: 120,532,428 (GRCm39)	V2895D	probably benign	Het
Syn3	T	C	10: 86,187,428 (GRCm39)	N232S	possibly damaging	Het
Taok3	T	A	5: 117,404,140 (GRCm39)	Y772N	probably damaging	Het
Tspan4	A	G	7: 141,062,483 (GRCm39)		probably null	Het
Ttn	C	A	2: 76,684,530 (GRCm39)		probably benign	Het
Vwa3b	T	A	1: 37,084,120 (GRCm39)	W98R	probably damaging	Het
Vwa5b2	A	T	16: 20,415,058 (GRCm39)	D360V	probably damaging	Het
Wdr73	A	T	7: 80,541,557 (GRCm39)	D328E	probably benign	Het
Xpo5	A	G	17: 46,545,406 (GRCm39)	N824S	probably benign	Het

Other mutations in Zbtb2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01020:Zbtb2	APN	10	4,319,702 (GRCm39)	missense	probably benign	0.28
IGL02340:Zbtb2	APN	10	4,318,712 (GRCm39)	missense	probably damaging	0.98
PIT4142001:Zbtb2	UTSW	10	4,319,493 (GRCm39)	missense	probably benign	0.00
PIT4581001:Zbtb2	UTSW	10	4,319,265 (GRCm39)	missense	possibly damaging	0.77
R1436:Zbtb2	UTSW	10	4,318,697 (GRCm39)	missense	probably benign	0.01
R2015:Zbtb2	UTSW	10	4,319,757 (GRCm39)	missense	possibly damaging	0.94
R2570:Zbtb2	UTSW	10	4,318,673 (GRCm39)	missense	probably damaging	1.00
R5134:Zbtb2	UTSW	10	4,319,267 (GRCm39)	missense	possibly damaging	0.48
R5275:Zbtb2	UTSW	10	4,318,508 (GRCm39)	missense	probably damaging	1.00
R5295:Zbtb2	UTSW	10	4,318,508 (GRCm39)	missense	probably damaging	1.00
R5328:Zbtb2	UTSW	10	4,319,267 (GRCm39)	missense	possibly damaging	0.48
R5475:Zbtb2	UTSW	10	4,319,275 (GRCm39)	missense	probably benign	0.18
R5719:Zbtb2	UTSW	10	4,319,456 (GRCm39)	missense	probably benign	0.22
R5907:Zbtb2	UTSW	10	4,318,592 (GRCm39)	missense	possibly damaging	0.52
R6033:Zbtb2	UTSW	10	4,318,599 (GRCm39)	missense	probably damaging	0.97
R6033:Zbtb2	UTSW	10	4,318,599 (GRCm39)	missense	probably damaging	0.97
R6492:Zbtb2	UTSW	10	4,319,711 (GRCm39)	missense	probably damaging	1.00
R7016:Zbtb2	UTSW	10	4,318,646 (GRCm39)	missense	probably damaging	1.00
R7287:Zbtb2	UTSW	10	4,318,986 (GRCm39)	missense	possibly damaging	0.77
R7348:Zbtb2	UTSW	10	4,324,574 (GRCm39)	missense	possibly damaging	0.48
R7486:Zbtb2	UTSW	10	4,319,025 (GRCm39)	nonsense	probably null
R8316:Zbtb2	UTSW	10	4,319,084 (GRCm39)	missense	probably benign	0.02
R9031:Zbtb2	UTSW	10	4,319,183 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- CCATTTGTATCATGCCATGGAG -3'
(R):5'- GTGCCTCAACCAGAGCATTG -3'

Sequencing Primer
(F):5'- GTATCATGCCATGGAGAAACTGTCC -3'
(R):5'- CAAGCAGACACTGGAGCTCTG -3'

Posted On

2016-08-04