Incidental Mutation 'R9750:Ap5m1'
ID 732483
Institutional Source Beutler Lab
Gene Symbol Ap5m1
Ensembl Gene ENSMUSG00000036291
Gene Name adaptor-related protein complex 5, mu 1 subunit
Synonyms Mudeng, 4932432K03Rik
MMRRC Submission
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R9750 (G1)
Quality Score 225.009
Status Not validated
Chromosome 14
Chromosomal Location 49303869-49331681 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 49317756 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 338 (T338A)
Ref Sequence ENSEMBL: ENSMUSP00000046536 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000037473] [ENSMUST00000227410] [ENSMUST00000227431] [ENSMUST00000227608] [ENSMUST00000228238]
AlphaFold no structure available at present
Predicted Effect probably benign
Transcript: ENSMUST00000037473
AA Change: T338A

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000046536
Gene: ENSMUSG00000036291
AA Change: T338A

DomainStartEndE-ValueType
low complexity region 51 68 N/A INTRINSIC
Pfam:Adap_comp_sub 196 476 3.2e-47 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226695
Predicted Effect probably benign
Transcript: ENSMUST00000227066
Predicted Effect probably benign
Transcript: ENSMUST00000227410
Predicted Effect probably benign
Transcript: ENSMUST00000227431
AA Change: T338A

PolyPhen 2 Score 0.006 (Sensitivity: 0.97; Specificity: 0.75)
Predicted Effect probably benign
Transcript: ENSMUST00000227608
Predicted Effect
Predicted Effect probably benign
Transcript: ENSMUST00000228238
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.8%
  • 10x: 99.2%
  • 20x: 97.9%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 43 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamts2 G T 11: 50,494,333 (GRCm39) V136L probably benign Het
Adamtsl3 G T 7: 82,244,589 (GRCm39) L1348F probably benign Het
Amotl1 T A 9: 14,504,102 (GRCm39) T369S probably benign Het
Anapc2 T G 2: 25,174,982 (GRCm39) V700G possibly damaging Het
Aox3 C T 1: 58,215,648 (GRCm39) Q1027* probably null Het
Carf T A 1: 60,171,158 (GRCm39) Y240* probably null Het
Ccl21a G A 4: 42,773,875 (GRCm39) A15V probably benign Het
Dcst1 A T 3: 89,261,462 (GRCm39) I429N probably damaging Het
Esco1 A G 18: 10,594,510 (GRCm39) S259P probably benign Het
Esp15 A G 17: 39,955,603 (GRCm39) M57V probably benign Het
Fat3 A G 9: 15,915,157 (GRCm39) I1597T probably benign Het
Fbxo38 T C 18: 62,674,061 (GRCm39) S7G probably benign Het
Gm11562 G A 11: 99,510,856 (GRCm39) P115S unknown Het
Hectd4 A T 5: 121,448,744 (GRCm39) Y364F probably benign Het
Kansl1l G C 1: 66,817,150 (GRCm39) I403M probably benign Het
Kmt2a T C 9: 44,747,499 (GRCm39) H1505R unknown Het
Krt79 T G 15: 101,839,196 (GRCm39) E424D probably benign Het
Lpgat1 T A 1: 191,510,587 (GRCm39) F391I probably benign Het
Ltbr G A 6: 125,284,348 (GRCm39) R365W probably damaging Het
Mon1a T A 9: 107,778,778 (GRCm39) V334E probably damaging Het
Ngef G A 1: 87,431,010 (GRCm39) P269L probably damaging Het
Nup210l A T 3: 90,117,659 (GRCm39) probably null Het
Obscn G A 11: 59,024,682 (GRCm39) R453W probably benign Het
Or1d2 A G 11: 74,255,858 (GRCm39) D121G possibly damaging Het
Pdzd8 A G 19: 59,289,684 (GRCm39) V572A probably benign Het
Pgr T C 9: 8,901,918 (GRCm39) S484P possibly damaging Het
Pygl G T 12: 70,245,303 (GRCm39) S473R possibly damaging Het
Samd1 T C 8: 84,725,989 (GRCm39) V410A probably damaging Het
Serpina3j T G 12: 104,280,942 (GRCm39) H38Q probably benign Het
Shprh A G 10: 11,040,204 (GRCm39) Y559C probably damaging Het
Skint5 T A 4: 113,727,866 (GRCm39) D426V unknown Het
Slc25a21 T C 12: 56,785,382 (GRCm39) K158R probably benign Het
Smc1b A T 15: 85,016,106 (GRCm39) N11K probably damaging Het
St18 T C 1: 6,873,216 (GRCm39) V317A probably benign Het
Styk1 CTCTTCATGATTTTCTT CTCTT 6: 131,278,612 (GRCm39) probably benign Het
Tcap A G 11: 98,275,228 (GRCm39) T121A probably benign Het
Tgs1 C A 4: 3,585,869 (GRCm39) Q249K probably damaging Het
Tiam1 A T 16: 89,695,394 (GRCm39) L21Q probably damaging Het
Tmem131l G A 3: 83,831,358 (GRCm39) A858V probably damaging Het
Trpm3 G A 19: 22,903,495 (GRCm39) R927H probably benign Het
Wdfy3 T A 5: 102,077,960 (GRCm39) H870L probably benign Het
Zfp518a T A 19: 40,903,889 (GRCm39) C1273S possibly damaging Het
Zfp960 A T 17: 17,307,898 (GRCm39) H204L probably damaging Het
Other mutations in Ap5m1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00323:Ap5m1 APN 14 49,311,247 (GRCm39) missense probably damaging 1.00
IGL01806:Ap5m1 APN 14 49,317,797 (GRCm39) missense probably damaging 1.00
IGL02011:Ap5m1 APN 14 49,318,592 (GRCm39) unclassified probably benign
IGL02165:Ap5m1 APN 14 49,316,185 (GRCm39) missense possibly damaging 0.94
IGL02203:Ap5m1 APN 14 49,317,715 (GRCm39) missense probably damaging 1.00
IGL02950:Ap5m1 APN 14 49,311,392 (GRCm39) missense probably benign 0.44
IGL03123:Ap5m1 APN 14 49,311,218 (GRCm39) missense probably damaging 1.00
IGL03368:Ap5m1 APN 14 49,318,593 (GRCm39) unclassified probably benign
R1688:Ap5m1 UTSW 14 49,318,291 (GRCm39) critical splice acceptor site probably null
R2113:Ap5m1 UTSW 14 49,323,705 (GRCm39) missense probably damaging 1.00
R2184:Ap5m1 UTSW 14 49,323,752 (GRCm39) missense probably damaging 1.00
R2220:Ap5m1 UTSW 14 49,318,552 (GRCm39) missense probably damaging 1.00
R2971:Ap5m1 UTSW 14 49,321,339 (GRCm39) nonsense probably null
R3425:Ap5m1 UTSW 14 49,311,140 (GRCm39) missense probably damaging 0.99
R4506:Ap5m1 UTSW 14 49,311,218 (GRCm39) missense probably damaging 1.00
R4679:Ap5m1 UTSW 14 49,316,285 (GRCm39) missense probably benign 0.00
R4799:Ap5m1 UTSW 14 49,318,527 (GRCm39) missense probably benign 0.08
R6365:Ap5m1 UTSW 14 49,316,285 (GRCm39) missense probably benign 0.00
R6834:Ap5m1 UTSW 14 49,311,194 (GRCm39) missense probably damaging 0.99
R7115:Ap5m1 UTSW 14 49,323,727 (GRCm39) nonsense probably null
R7224:Ap5m1 UTSW 14 49,318,384 (GRCm39) missense unknown
R7383:Ap5m1 UTSW 14 49,311,653 (GRCm39) missense possibly damaging 0.77
R7539:Ap5m1 UTSW 14 49,311,014 (GRCm39) missense probably damaging 1.00
R7866:Ap5m1 UTSW 14 49,311,218 (GRCm39) missense probably damaging 1.00
R7897:Ap5m1 UTSW 14 49,311,232 (GRCm39) missense probably benign 0.11
R8853:Ap5m1 UTSW 14 49,311,337 (GRCm39) missense possibly damaging 0.79
R9236:Ap5m1 UTSW 14 49,311,064 (GRCm39) missense probably benign 0.00
R9545:Ap5m1 UTSW 14 49,311,271 (GRCm39) missense possibly damaging 0.76
Predicted Primers PCR Primer
(F):5'- GAGGAACAAGTGTGTACGCC -3'
(R):5'- GGCTAATTCGATTCGCCAGG -3'

Sequencing Primer
(F):5'- TCTCATATCTGCTCAGAGAGGCAG -3'
(R):5'- CTAATTCGATTCGCCAGGTTGTTG -3'
Posted On 2022-11-14