Incidental Mutation 'R3406:Eif2ak2'
| ID |
259409 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Eif2ak2
|
| Ensembl Gene |
ENSMUSG00000024079 |
| Gene Name |
eukaryotic translation initiation factor 2-alpha kinase 2 |
| Synonyms |
Pkr, 2310047A08Rik, IFN-induced and double-stranded RNA-activated kinase, 4732414G15Rik, dsRNA-activated kinase, eIF-2 alpha, Prkr, Tik, eIF-2 alpha, IFN- type I-induced and dsRNA-activated kinase |
| MMRRC Submission |
040624-MU
|
| Accession Numbers |
|
| Essential gene? |
Non essential
(E-score: 0.000)
|
| Stock # |
R3406 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
17 |
| Chromosomal Location |
79159993-79190002 bp(-) (GRCm39) |
| Type of Mutation |
splice site |
| DNA Base Change (assembly) |
A to G
at 79166068 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000024884
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000024884]
|
| AlphaFold |
Q03963 |
| PDB Structure |
Solution structure of the second DSRM domain in Interferon-induced, double-stranded RNA-activated protein kinase [SOLUTION NMR]
Solution structure of the first DSRM domain in Interferon-induced, double-stranded RNA-activated protein kinase [SOLUTION NMR]
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000024884
|
| SMART Domains |
Protein: ENSMUSP00000024884
Gene: ENSMUSG00000024079
| Domain | Start | End | E-Value | Type |
|---|
|
DSRM
|
9 |
75 |
2.34e-20 |
SMART |
|
DSRM
|
96 |
161 |
7.66e-16 |
SMART |
|
low complexity region
|
169 |
196 |
N/A |
INTRINSIC |
|
Pfam:Pkinase
|
242 |
500 |
4.6e-56 |
PFAM |
|
Pfam:Pkinase_Tyr
|
242 |
500 |
8e-37 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000082836
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000169940
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 93.4%
|
| Validation Efficiency |
98% (52/53) |
| MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a serine/threonine protein kinase that is activated by autophosphorylation after binding to dsRNA. The activated form of the encoded protein can phosphorylate translation initiation factor EIF2S1, which in turn inhibits protein synthesis. This protein is also activated by manganese ions and heparin. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]
PHENOTYPE: Mice homozygous for disruptions in this gene display altered susceptibility to viral infection. [provided by MGI curators]
|
| Allele List at MGI |
All alleles(7) : Targeted, knock-out(2) Gene trapped(5) |
| Other mutations in this stock |
Total: 51 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abhd18 |
T |
A |
3: 40,859,338 (GRCm39) |
M1K |
probably null |
Het |
| Adam34l |
A |
T |
8: 44,079,089 (GRCm39) |
C378* |
probably null |
Het |
| Bdkrb2 |
T |
C |
12: 105,558,755 (GRCm39) |
V332A |
possibly damaging |
Het |
| Cdc27 |
T |
C |
11: 104,398,026 (GRCm39) |
E778G |
probably damaging |
Het |
| Chd4 |
C |
A |
6: 125,098,970 (GRCm39) |
T1586K |
probably benign |
Het |
| Cnga3 |
A |
G |
1: 37,301,146 (GRCm39) |
E622G |
probably benign |
Het |
| Dbh |
A |
G |
2: 27,064,977 (GRCm39) |
D396G |
possibly damaging |
Het |
| Dhodh |
G |
A |
8: 110,330,107 (GRCm39) |
R86* |
probably null |
Het |
| Dpt |
A |
C |
1: 164,624,500 (GRCm39) |
E67A |
probably damaging |
Het |
| Esp4 |
T |
A |
17: 40,913,336 (GRCm39) |
L68M |
possibly damaging |
Het |
| Exo1 |
A |
G |
1: 175,733,536 (GRCm39) |
K787E |
possibly damaging |
Het |
| Fbxo38 |
T |
C |
18: 62,647,914 (GRCm39) |
T875A |
probably damaging |
Het |
| Gsdma |
T |
C |
11: 98,563,964 (GRCm39) |
|
probably benign |
Het |
| Hemk1 |
G |
A |
9: 107,214,415 (GRCm39) |
Q6* |
probably null |
Het |
| Hmcn2 |
C |
T |
2: 31,323,284 (GRCm39) |
|
probably benign |
Het |
| Hook2 |
A |
G |
8: 85,720,613 (GRCm39) |
|
probably benign |
Het |
| Irx3 |
A |
G |
8: 92,525,555 (GRCm39) |
S507P |
unknown |
Het |
| Kazn |
C |
A |
4: 141,966,506 (GRCm39) |
|
probably benign |
Het |
| Kcne4 |
C |
T |
1: 78,795,688 (GRCm39) |
A112V |
possibly damaging |
Het |
| Lamb1 |
C |
T |
12: 31,337,528 (GRCm39) |
R372C |
probably damaging |
Het |
| Lrrc30 |
A |
G |
17: 67,939,175 (GRCm39) |
L135P |
probably damaging |
Het |
| Lyst |
T |
A |
13: 13,809,815 (GRCm39) |
M495K |
possibly damaging |
Het |
| Mab21l3 |
C |
A |
3: 101,730,847 (GRCm39) |
V131F |
probably damaging |
Het |
| Mki67 |
T |
A |
7: 135,309,204 (GRCm39) |
T416S |
probably benign |
Het |
| Mlst8 |
A |
T |
17: 24,697,099 (GRCm39) |
M56K |
probably benign |
Het |
| Mmp9 |
A |
G |
2: 164,791,310 (GRCm39) |
Y160C |
probably damaging |
Het |
| Mslnl |
A |
G |
17: 25,965,155 (GRCm39) |
Y507C |
probably damaging |
Het |
| Muc6 |
G |
A |
7: 141,218,313 (GRCm39) |
S2120F |
possibly damaging |
Het |
| Myl12a |
A |
T |
17: 71,301,737 (GRCm39) |
M130K |
probably benign |
Het |
| Nalf2 |
A |
G |
X: 98,889,109 (GRCm39) |
I325V |
probably benign |
Het |
| Ncdn |
C |
T |
4: 126,642,388 (GRCm39) |
R423Q |
probably benign |
Het |
| Ncf2 |
A |
G |
1: 152,701,698 (GRCm39) |
|
probably benign |
Het |
| Nek8 |
G |
T |
11: 78,061,572 (GRCm39) |
S319* |
probably null |
Het |
| Or11g7 |
G |
A |
14: 50,690,653 (GRCm39) |
C48Y |
probably benign |
Het |
| Or52m2 |
T |
C |
7: 102,263,993 (GRCm39) |
M68V |
possibly damaging |
Het |
| Pcdh17 |
T |
A |
14: 84,684,062 (GRCm39) |
D176E |
probably damaging |
Het |
| Pcdhb15 |
C |
A |
18: 37,608,442 (GRCm39) |
A558E |
probably benign |
Het |
| Plrg1 |
T |
A |
3: 82,978,526 (GRCm39) |
W431R |
probably damaging |
Het |
| Rbfox3 |
T |
A |
11: 118,387,283 (GRCm39) |
Q277L |
possibly damaging |
Het |
| Rpgrip1 |
G |
A |
14: 52,382,666 (GRCm39) |
D600N |
possibly damaging |
Het |
| Siah3 |
A |
G |
14: 75,763,421 (GRCm39) |
D224G |
probably damaging |
Het |
| Slc22a6 |
T |
C |
19: 8,598,675 (GRCm39) |
L244P |
probably damaging |
Het |
| Stap2 |
A |
T |
17: 56,304,511 (GRCm39) |
W374R |
probably benign |
Het |
| Tbck |
T |
A |
3: 132,432,845 (GRCm39) |
N418K |
probably benign |
Het |
| Tcp11x2 |
T |
C |
X: 134,555,733 (GRCm39) |
N474S |
probably damaging |
Het |
| Tenm3 |
A |
C |
8: 48,681,590 (GRCm39) |
V2680G |
probably damaging |
Het |
| Thada |
A |
T |
17: 84,538,213 (GRCm39) |
|
probably benign |
Het |
| Tlr6 |
C |
T |
5: 65,110,772 (GRCm39) |
V712M |
probably damaging |
Het |
| Uvssa |
G |
T |
5: 33,547,162 (GRCm39) |
G243C |
probably damaging |
Het |
| Vwa8 |
T |
A |
14: 79,401,660 (GRCm39) |
|
probably benign |
Het |
| Znrf2 |
A |
T |
6: 54,861,776 (GRCm39) |
N229I |
probably damaging |
Het |
|
| Other mutations in Eif2ak2 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00569:Eif2ak2
|
APN |
17 |
79,176,912 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL01017:Eif2ak2
|
APN |
17 |
79,171,287 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01068:Eif2ak2
|
APN |
17 |
79,172,800 (GRCm39) |
missense |
probably damaging |
1.00 |
|
3-1:Eif2ak2
|
UTSW |
17 |
79,176,927 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0038:Eif2ak2
|
UTSW |
17 |
79,171,384 (GRCm39) |
missense |
probably benign |
|
|
R0801:Eif2ak2
|
UTSW |
17 |
79,173,778 (GRCm39) |
nonsense |
probably null |
|
|
R1702:Eif2ak2
|
UTSW |
17 |
79,164,063 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2020:Eif2ak2
|
UTSW |
17 |
79,171,392 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R2159:Eif2ak2
|
UTSW |
17 |
79,181,447 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R3405:Eif2ak2
|
UTSW |
17 |
79,166,068 (GRCm39) |
splice site |
probably benign |
|
|
R4355:Eif2ak2
|
UTSW |
17 |
79,165,963 (GRCm39) |
missense |
probably benign |
0.08 |
|
R5135:Eif2ak2
|
UTSW |
17 |
79,173,774 (GRCm39) |
missense |
probably damaging |
0.96 |
|
R5145:Eif2ak2
|
UTSW |
17 |
79,183,633 (GRCm39) |
missense |
possibly damaging |
0.60 |
|
R5336:Eif2ak2
|
UTSW |
17 |
79,181,472 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6195:Eif2ak2
|
UTSW |
17 |
79,178,662 (GRCm39) |
nonsense |
probably null |
|
|
R6233:Eif2ak2
|
UTSW |
17 |
79,178,662 (GRCm39) |
nonsense |
probably null |
|
|
R6417:Eif2ak2
|
UTSW |
17 |
79,164,048 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6737:Eif2ak2
|
UTSW |
17 |
79,171,377 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7108:Eif2ak2
|
UTSW |
17 |
79,165,965 (GRCm39) |
nonsense |
probably null |
|
|
R7238:Eif2ak2
|
UTSW |
17 |
79,173,760 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7830:Eif2ak2
|
UTSW |
17 |
79,173,832 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7843:Eif2ak2
|
UTSW |
17 |
79,176,203 (GRCm39) |
missense |
probably benign |
0.24 |
|
R7845:Eif2ak2
|
UTSW |
17 |
79,171,327 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8003:Eif2ak2
|
UTSW |
17 |
79,183,652 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8143:Eif2ak2
|
UTSW |
17 |
79,165,961 (GRCm39) |
missense |
probably benign |
0.09 |
|
R9658:Eif2ak2
|
UTSW |
17 |
79,183,632 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9719:Eif2ak2
|
UTSW |
17 |
79,162,783 (GRCm39) |
missense |
probably damaging |
0.96 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATCCTGACACAACCTCTGGC -3'
(R):5'- TCCCTGGTTTGGAAAGCCTG -3'
Sequencing Primer
(F):5'- GACACAACCTCTGGCCTCTATATG -3'
(R):5'- AACGTTAATCCCTGCACTCTGGAG -3'
|
| Posted On |
2015-01-23 |
Incidental Mutation