Mutagenetix > Incidental Mutation

Incidental Mutation 'R6883:Fmo6'

536876

Institutional Source

Beutler Lab

Gene Symbol

Fmo6

Ensembl Gene

ENSMUSG00000095576

Gene Name

flavin containing monooxygenase 6

Synonyms

MMRRC Submission

044978-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.068) question?

Stock #

R6883 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

162744120-162765084 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 162757461 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Isoleucine to Threonine at position 104 (I104T)

Ref Sequence

ENSEMBL: ENSMUSP00000144106 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000178465] [ENSMUST00000195576]

AlphaFold

J3QMN6

Predicted Effect

probably damaging
Transcript: ENSMUST00000178465
AA Change: I104T

PolyPhen 2 Score 0.993 (Sensitivity: 0.70; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000136378
Gene: ENSMUSG00000095576
AA Change: I104T

Domain	Start	End	E-Value	Type
Pfam:FMO-like	2	532	3.2e-273	PFAM
Pfam:Pyr_redox_2	3	226	2e-13	PFAM
Pfam:Pyr_redox_3	6	220	4.6e-17	PFAM
Pfam:K_oxygenase	79	223	1e-7	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000195576
AA Change: I104T

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)

SMART Domains

Protein: ENSMUSP00000144106
Gene: ENSMUSG00000095576
AA Change: I104T

Domain	Start	End	E-Value	Type
Pfam:FMO-like	2	118	5.1e-58	PFAM
Pfam:NAD_binding_8	7	84	2.2e-5	PFAM

Meta Mutation Damage Score

0.6329

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.4%
20x: 98.2%

Validation Efficiency

92% (45/49)

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Acaa1b	A	G	9: 118,985,728 (GRCm39)	S66P	possibly damaging	Het
Adh7	A	T	3: 137,929,825 (GRCm39)	E167V	probably damaging	Het
Ano6	T	C	15: 95,859,992 (GRCm39)	S705P	probably damaging	Het
Arpc1b	T	C	5: 145,063,739 (GRCm39)	V329A	probably benign	Het
Btla	C	T	16: 45,063,092 (GRCm39)	H152Y	probably benign	Het
Cadps	T	C	14: 12,465,883 (GRCm38)	E1009G	probably damaging	Het
Cttnbp2nl	A	G	3: 104,918,507 (GRCm39)		probably null	Het
Cyp4a12a	G	T	4: 115,159,221 (GRCm39)	V164F	probably damaging	Het
Duox1	G	T	2: 122,155,065 (GRCm39)		probably null	Het
Fcgbpl1	A	T	7: 27,852,260 (GRCm39)	H1261L	possibly damaging	Het
Fnbp4	T	C	2: 90,576,172 (GRCm39)		probably null	Het
Garem1	T	C	18: 21,262,769 (GRCm39)	T682A	probably benign	Het
Gm49358	A	G	10: 86,651,762 (GRCm39)	E188G	probably benign	Het
Gm5773	T	C	3: 93,681,162 (GRCm39)	I278T	probably benign	Het
Ifi27l2a	A	G	12: 103,409,756 (GRCm39)		probably benign	Het
Inpp5d	A	C	1: 87,627,412 (GRCm39)	K308T	probably damaging	Het
Irf6	A	T	1: 192,849,774 (GRCm39)	Y232F	probably damaging	Het
Kcnmb4	T	C	10: 116,309,248 (GRCm39)	Q60R	probably benign	Het
Klri2	T	C	6: 129,709,985 (GRCm39)	D205G	probably benign	Het
Mcm9	A	T	10: 53,492,110 (GRCm39)	W352R	probably damaging	Het
Nat8	A	G	6: 85,807,650 (GRCm39)	V161A	possibly damaging	Het
Nlrp9c	A	T	7: 26,077,556 (GRCm39)	M742K	probably benign	Het
Or10ag58	C	A	2: 87,265,623 (GRCm39)	T264K	probably damaging	Het
Or13j1	T	C	4: 43,705,723 (GRCm39)	T282A	possibly damaging	Het
Or5an10	C	A	19: 12,275,934 (GRCm39)	Q187H	probably damaging	Het
Pcdha11	A	T	18: 37,144,242 (GRCm39)	D111V	probably damaging	Het
Pcdhb6	A	T	18: 37,468,198 (GRCm39)	D373V	probably damaging	Het
Pcolce2	A	T	9: 95,560,396 (GRCm39)		probably null	Het
Pik3cb	T	C	9: 98,983,453 (GRCm39)	M52V	probably benign	Het
Pipox	T	C	11: 77,774,729 (GRCm39)	E118G	probably benign	Het
Pou4f2	T	C	8: 79,162,307 (GRCm39)	S99G	probably benign	Het
Ptpn12	T	A	5: 21,260,711 (GRCm39)	Q12L	probably benign	Het
Sim2	G	T	16: 93,926,395 (GRCm39)	A540S	probably benign	Het
Smg1	A	T	7: 117,767,403 (GRCm39)		probably benign	Het
Sntb1	A	G	15: 55,769,719 (GRCm39)	V90A	probably benign	Het
Spns2	T	C	11: 72,347,196 (GRCm39)		probably null	Het
Syne1	G	T	10: 5,181,704 (GRCm39)	C4210*	probably null	Het
Tek	T	C	4: 94,725,426 (GRCm39)	I564T	possibly damaging	Het
Tmem94	T	G	11: 115,687,287 (GRCm39)	C1135W	probably damaging	Het
Tnxb	T	A	17: 34,937,493 (GRCm39)	D3827E	probably damaging	Het
Ttl	A	G	2: 128,923,992 (GRCm39)	D235G	possibly damaging	Het
Tuba4a	A	G	1: 75,194,066 (GRCm39)	S5P	probably damaging	Het
Uaca	T	A	9: 60,777,173 (GRCm39)	V518D	probably damaging	Het
Unc80	A	T	1: 66,685,563 (GRCm39)	Q2229L	probably benign	Het
Unkl	C	T	17: 25,449,307 (GRCm39)	A78V	probably damaging	Het
Uroc1	C	T	6: 90,315,574 (GRCm39)	Q152*	probably null	Het
Vmn2r51	G	T	7: 9,834,025 (GRCm39)	Q338K	possibly damaging	Het
Vps50	C	T	6: 3,498,513 (GRCm39)		probably benign	Het

Other mutations in Fmo6

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01392:Fmo6	APN	1	162,757,580 (GRCm39)	nonsense	probably null
IGL02083:Fmo6	APN	1	162,748,033 (GRCm39)	nonsense	probably null
adventure	UTSW	1	162,750,379 (GRCm39)	missense	probably benign
R0792:Fmo6	UTSW	1	162,748,132 (GRCm39)	missense	probably damaging	0.98
R0940:Fmo6	UTSW	1	162,753,795 (GRCm39)	missense	probably benign	0.07
R1173:Fmo6	UTSW	1	162,753,710 (GRCm39)	missense	probably damaging	1.00
R1268:Fmo6	UTSW	1	162,748,086 (GRCm39)	missense	probably damaging	1.00
R1538:Fmo6	UTSW	1	162,753,675 (GRCm39)	missense	probably damaging	1.00
R1694:Fmo6	UTSW	1	162,750,241 (GRCm39)	missense	probably benign
R1717:Fmo6	UTSW	1	162,753,821 (GRCm39)	nonsense	probably null
R1837:Fmo6	UTSW	1	162,750,379 (GRCm39)	missense	probably benign
R2125:Fmo6	UTSW	1	162,757,527 (GRCm39)	missense	possibly damaging	0.82
R2434:Fmo6	UTSW	1	162,744,439 (GRCm39)	missense	probably benign	0.00
R2894:Fmo6	UTSW	1	162,750,293 (GRCm39)	nonsense	probably null
R4864:Fmo6	UTSW	1	162,751,964 (GRCm39)	missense	probably benign	0.34
R6414:Fmo6	UTSW	1	162,748,014 (GRCm39)	missense	probably damaging	0.97
R6576:Fmo6	UTSW	1	162,750,264 (GRCm39)	missense	probably damaging	1.00
R7013:Fmo6	UTSW	1	162,745,817 (GRCm39)	missense	probably benign	0.00
R7014:Fmo6	UTSW	1	162,753,877 (GRCm39)	missense	probably benign	0.13
R7657:Fmo6	UTSW	1	162,750,285 (GRCm39)	missense	probably benign
R8351:Fmo6	UTSW	1	162,748,174 (GRCm39)	missense	probably damaging	1.00
R8451:Fmo6	UTSW	1	162,748,174 (GRCm39)	missense	probably damaging	1.00
R8911:Fmo6	UTSW	1	162,748,114 (GRCm39)	missense	possibly damaging	0.80
R9217:Fmo6	UTSW	1	162,748,046 (GRCm39)	missense	probably benign	0.02
R9274:Fmo6	UTSW	1	162,747,921 (GRCm39)	missense	probably benign	0.00
X0025:Fmo6	UTSW	1	162,750,427 (GRCm39)	missense	probably damaging	1.00
X0025:Fmo6	UTSW	1	162,748,065 (GRCm39)	missense	probably benign	0.29
Z1176:Fmo6	UTSW	1	162,753,701 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- TTCAGAGATTTCAGAGAATTGCAGGG -3'
(R):5'- TCTCAGAAAAGAGCACCATTCTTG -3'

Sequencing Primer
(F):5'- TTCAGAGAATTGCAGGGGGTGG -3'
(R):5'- TTCCTAGAGCCACGCAGAG -3'

Posted On

2018-10-18