Mutagenetix > Incidental Mutation

Incidental Mutation 'R7711:Rassf2'

594590

Institutional Source

Beutler Lab

Gene Symbol

Rassf2

Ensembl Gene

ENSMUSG00000027339

Gene Name

Ras association (RalGDS/AF-6) domain family member 2

Synonyms

3830431H01Rik, 9030412M04Rik

MMRRC Submission

045769-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.252) question?

Stock #

R7711 (G1)

Quality Score

225.009

Status

Not validated

Chromosome

Chromosomal Location

131834770-131872336 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 131847297 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Serine at position 103 (T103S)

Ref Sequence

ENSEMBL: ENSMUSP00000028814 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000028814] [ENSMUST00000103182] [ENSMUST00000139047] [ENSMUST00000140791]

AlphaFold

Q8BMS9

Predicted Effect

probably benign
Transcript: ENSMUST00000028814
AA Change: T103S

PolyPhen 2 Score 0.041 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000028814
Gene: ENSMUSG00000027339
AA Change: T103S

Domain	Start	End	E-Value	Type
RA	174	265	5.33e-18	SMART
coiled coil region	292	312	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000103182
AA Change: T103S

PolyPhen 2 Score 0.041 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000099471
Gene: ENSMUSG00000027339
AA Change: T103S

Domain	Start	End	E-Value	Type
RA	174	265	5.33e-18	SMART
Pfam:Nore1-SARAH	277	316	3.9e-18	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000139047
AA Change: T103S

PolyPhen 2 Score 0.041 (Sensitivity: 0.94; Specificity: 0.83)

SMART Domains

Protein: ENSMUSP00000120194
Gene: ENSMUSG00000027339
AA Change: T103S

Domain	Start	End	E-Value	Type
Blast:RA	174	202	2e-12	BLAST

Predicted Effect

probably benign
Transcript: ENSMUST00000140791

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.2%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that contains a Ras association domain. Similar to its cattle and sheep counterparts, this gene is located near the prion gene. Two alternatively spliced transcripts encoding the same isoform have been reported. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit bone defects and hematopoeitic abnormalities. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
6430548M08Rik	G	A	8: 120,886,723 (GRCm39)	E342K	possibly damaging	Het
9430015G10Rik	T	G	4: 156,203,649 (GRCm39)	V34G	probably damaging	Het
Alkbh3	T	C	2: 93,838,437 (GRCm39)	S44G	probably benign	Het
Alpk2	A	T	18: 65,439,555 (GRCm39)	C613S	probably benign	Het
Aplp2	G	A	9: 31,072,645 (GRCm39)	R488C	probably damaging	Het
Arid1b	A	G	17: 5,387,095 (GRCm39)	N1463S	probably benign	Het
Atxn2l	A	T	7: 126,100,441 (GRCm39)	L125Q	probably damaging	Het
Cd3d	A	G	9: 44,897,634 (GRCm39)	K172E	probably benign	Het
Chd7	T	A	4: 8,805,234 (GRCm39)	D764E	probably benign	Het
Col19a1	T	C	1: 24,569,089 (GRCm39)	I220V	unknown	Het
Cpq	T	C	15: 33,497,493 (GRCm39)	I411T	probably benign	Het
Crybg2	C	A	4: 133,792,844 (GRCm39)	H160N	probably benign	Het
Cryl1	A	T	14: 57,513,013 (GRCm39)	C285S	probably benign	Het
Dapk1	A	G	13: 60,909,365 (GRCm39)	D1326G	probably damaging	Het
Dgkh	A	G	14: 78,962,459 (GRCm39)	V24A	probably benign	Het
Dnajb4	A	C	3: 151,892,154 (GRCm39)	S226R	probably benign	Het
Dnm3	A	T	1: 161,819,622 (GRCm39)	I850N	possibly damaging	Het
Dtna	G	T	18: 23,758,253 (GRCm39)		probably null	Het
Efcab6	G	T	15: 83,834,125 (GRCm39)	D494E	probably benign	Het
Fam169a	G	T	13: 97,263,196 (GRCm39)	E550*	probably null	Het
Fbxw7	A	G	3: 84,832,988 (GRCm39)	N10S	probably benign	Het
Flrt2	T	C	12: 95,747,528 (GRCm39)	F622S	probably damaging	Het
Gprc5d	G	A	6: 135,093,355 (GRCm39)	T184I	possibly damaging	Het
Grem2	A	G	1: 174,664,693 (GRCm39)	V52A	probably damaging	Het
Gtf3c2	G	T	5: 31,327,533 (GRCm39)	T310N	probably damaging	Het
H2-T13	T	A	17: 36,394,770 (GRCm39)	N51I	probably damaging	Het
Hyou1	A	G	9: 44,295,759 (GRCm39)	D338G	possibly damaging	Het
Ifna6	T	C	4: 88,745,971 (GRCm39)	S107P	probably benign	Het
Kif14	G	T	1: 136,399,191 (GRCm39)	G451C	probably benign	Het
Kit	T	A	5: 75,798,019 (GRCm39)	F436I	probably damaging	Het
Lonp2	G	A	8: 87,440,636 (GRCm39)	C751Y	probably damaging	Het
Lonrf1	C	A	8: 36,716,375 (GRCm39)	G87C	probably damaging	Het
Lrp2	T	C	2: 69,309,687 (GRCm39)		probably null	Het
Lrrc37	G	T	11: 103,505,738 (GRCm39)	Q2077K	probably benign	Het
Mkln1	A	G	6: 31,469,584 (GRCm39)	H598R	probably damaging	Het
Mmaa	T	C	8: 79,994,774 (GRCm39)	H344R	probably benign	Het
Myh7	C	G	14: 55,226,258 (GRCm39)	D461H	probably damaging	Het
Myh7b	T	G	2: 155,462,323 (GRCm39)	L342R	probably damaging	Het
Or12e8	A	G	2: 87,187,871 (GRCm39)	N28D	probably benign	Het
Or2h2b-ps1	C	T	17: 37,480,847 (GRCm39)	G129R	probably damaging	Het
Or4f4-ps1	T	A	2: 111,330,497 (GRCm39)	I300K	probably damaging	Het
Or7e178	A	T	9: 20,225,319 (GRCm39)	V299E	possibly damaging	Het
Pcsk5	T	A	19: 17,416,444 (GRCm39)	Y1668F	possibly damaging	Het
Pfn4	C	T	12: 4,824,414 (GRCm39)	T47I	possibly damaging	Het
Pklr	T	C	3: 89,048,649 (GRCm39)	L104P	probably damaging	Het
Plcxd2	A	G	16: 45,800,693 (GRCm39)	V177A	probably benign	Het
Pramel16	T	C	4: 143,675,822 (GRCm39)	S335G	probably benign	Het
Prdm10	G	T	9: 31,268,528 (GRCm39)	A826S	probably damaging	Het
Prrt4	A	G	6: 29,177,455 (GRCm39)	S105P	probably benign	Het
Prss51	T	A	14: 64,334,937 (GRCm39)	V164E	probably damaging	Het
Psap	T	C	10: 60,135,634 (GRCm39)	V360A	probably damaging	Het
Psg22	T	C	7: 18,452,267 (GRCm39)		probably null	Het
Qrfprl	A	G	6: 65,418,357 (GRCm39)	H23R		Het
Rad51	A	G	2: 118,962,071 (GRCm39)	Q206R	probably benign	Het
Rap1gds1	T	C	3: 138,664,874 (GRCm39)	K277R	probably benign	Het
Rbm15b	T	A	9: 106,763,142 (GRCm39)	H342L	possibly damaging	Het
Rsf1	G	GACCGCGGCC	7: 97,229,116 (GRCm39)		probably benign	Het
Scaf8	T	C	17: 3,237,909 (GRCm39)	F561L	probably damaging	Het
Scn1a	G	A	2: 66,134,004 (GRCm39)	A130V	probably benign	Het
Scn7a	T	C	2: 66,531,221 (GRCm39)	E552G	probably damaging	Het
Slc39a14	T	A	14: 70,551,124 (GRCm39)	R183W	probably damaging	Het
Slfn1	A	T	11: 83,012,089 (GRCm39)	K68N	possibly damaging	Het
Slx4ip	A	G	2: 136,909,914 (GRCm39)	D303G	probably damaging	Het
Snx17	T	A	5: 31,352,804 (GRCm39)	F101Y	probably damaging	Het
Spata31e3	T	G	13: 50,401,131 (GRCm39)	R398S	probably benign	Het
Specc1l	C	A	10: 75,066,642 (GRCm39)	N30K	probably benign	Het
Spmip2	A	G	3: 79,313,167 (GRCm39)	I80M	probably damaging	Het
Tbx19	A	G	1: 164,966,768 (GRCm39)	S369P	probably benign	Het
Usp17ld	T	C	7: 102,899,489 (GRCm39)	H481R	probably damaging	Het
Wnt2	A	G	6: 17,990,036 (GRCm39)	L287P	probably benign	Het
Zfhx4	G	T	3: 5,462,016 (GRCm39)	M1230I	probably damaging	Het
Zfp1	T	C	8: 112,396,794 (GRCm39)	C272R	not run	Het
Zfp458	A	G	13: 67,407,664 (GRCm39)	S64P	possibly damaging	Het

Other mutations in Rassf2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01991:Rassf2	APN	2	131,842,352 (GRCm39)	critical splice donor site	probably null
IGL02142:Rassf2	APN	2	131,838,353 (GRCm39)	missense	possibly damaging	0.69
IGL02694:Rassf2	APN	2	131,851,641 (GRCm39)	missense	possibly damaging	0.91
IGL02727:Rassf2	APN	2	131,846,307 (GRCm39)	missense	probably benign	0.11
R0722:Rassf2	UTSW	2	131,844,830 (GRCm39)	missense	probably damaging	1.00
R2326:Rassf2	UTSW	2	131,842,352 (GRCm39)	critical splice donor site	probably null
R2508:Rassf2	UTSW	2	131,840,163 (GRCm39)	critical splice donor site	probably null
R3808:Rassf2	UTSW	2	131,840,180 (GRCm39)	splice site	probably null
R3809:Rassf2	UTSW	2	131,840,180 (GRCm39)	splice site	probably null
R4077:Rassf2	UTSW	2	131,854,522 (GRCm39)	missense	probably benign
R4085:Rassf2	UTSW	2	131,846,299 (GRCm39)	missense	probably damaging	1.00
R4285:Rassf2	UTSW	2	131,847,314 (GRCm39)	missense	probably benign	0.17
R4721:Rassf2	UTSW	2	131,846,358 (GRCm39)	missense	probably benign
R4762:Rassf2	UTSW	2	131,844,783 (GRCm39)	unclassified	probably benign
R5012:Rassf2	UTSW	2	131,851,610 (GRCm39)	missense	probably damaging	1.00
R6545:Rassf2	UTSW	2	131,840,237 (GRCm39)	missense	probably damaging	0.98
R6788:Rassf2	UTSW	2	131,844,845 (GRCm39)	missense	probably damaging	1.00
R7232:Rassf2	UTSW	2	131,838,332 (GRCm39)	missense	probably damaging	1.00
R9332:Rassf2	UTSW	2	131,846,326 (GRCm39)	missense	probably damaging	0.99
X0063:Rassf2	UTSW	2	131,840,174 (GRCm39)	missense	probably damaging	1.00
Z1177:Rassf2	UTSW	2	131,846,289 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- GCAGGTTGCTTTGAAGGAAG -3'
(R):5'- TGGATGCTCGGCACATCTTG -3'

Sequencing Primer
(F):5'- AGGTGGGAGAATTTAAAGTCTTTCC -3'
(R):5'- GCACATCTTGCCTGCCTCTTG -3'

Posted On

2019-11-12