Mutagenetix > Incidental Mutation

Incidental Mutation 'R7821:Zfp354a'

601879

Institutional Source

Beutler Lab

Gene Symbol

Zfp354a

Ensembl Gene

ENSMUSG00000020364

Gene Name

zinc finger protein 354A

Synonyms

Tcf17, kid1

MMRRC Submission

045875-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.133) question?

Stock #

R7821 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

50950084-50963626 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 50960539 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Serine at position 248 (F248S)

Ref Sequence

ENSEMBL: ENSMUSP00000104750 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000020628] [ENSMUST00000102766] [ENSMUST00000109119] [ENSMUST00000109122]

AlphaFold

Q61751

Predicted Effect

probably damaging
Transcript: ENSMUST00000020628
AA Change: F249S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000020628
Gene: ENSMUSG00000020364
AA Change: F249S

Domain	Start	End	E-Value	Type
KRAB	14	74	8.48e-36	SMART
ZnF_C2H2	184	206	1.12e-3	SMART
ZnF_C2H2	212	234	1.38e-3	SMART
ZnF_C2H2	240	262	9.73e-4	SMART
ZnF_C2H2	268	290	1.72e-4	SMART
ZnF_C2H2	321	343	1.47e-3	SMART
ZnF_C2H2	349	371	4.24e-4	SMART
ZnF_C2H2	377	399	2.79e-4	SMART
ZnF_C2H2	405	427	9.58e-3	SMART
ZnF_C2H2	433	455	2.4e-3	SMART
ZnF_C2H2	461	483	1.2e-3	SMART
ZnF_C2H2	489	511	2.99e-4	SMART
ZnF_C2H2	517	539	5.5e-3	SMART
ZnF_C2H2	545	567	9.08e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000102766
AA Change: F249S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000099827
Gene: ENSMUSG00000020364
AA Change: F249S

Domain	Start	End	E-Value	Type
KRAB	14	74	8.48e-36	SMART
ZnF_C2H2	184	206	1.12e-3	SMART
ZnF_C2H2	212	234	1.38e-3	SMART
ZnF_C2H2	240	262	9.73e-4	SMART
ZnF_C2H2	268	290	1.72e-4	SMART
ZnF_C2H2	321	343	1.47e-3	SMART
ZnF_C2H2	349	371	4.24e-4	SMART
ZnF_C2H2	377	399	2.79e-4	SMART
ZnF_C2H2	405	427	9.58e-3	SMART
ZnF_C2H2	433	455	2.4e-3	SMART
ZnF_C2H2	461	483	1.2e-3	SMART
ZnF_C2H2	489	511	2.99e-4	SMART
ZnF_C2H2	517	539	5.5e-3	SMART
ZnF_C2H2	545	567	9.08e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000109119
AA Change: F250S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000104747
Gene: ENSMUSG00000020364
AA Change: F250S

Domain	Start	End	E-Value	Type
KRAB	14	75	1.67e-34	SMART
ZnF_C2H2	185	207	1.12e-3	SMART
ZnF_C2H2	213	235	1.38e-3	SMART
ZnF_C2H2	241	263	9.73e-4	SMART
ZnF_C2H2	269	291	1.72e-4	SMART
ZnF_C2H2	322	344	1.47e-3	SMART
ZnF_C2H2	350	372	4.24e-4	SMART
ZnF_C2H2	378	400	2.79e-4	SMART
ZnF_C2H2	406	428	9.58e-3	SMART
ZnF_C2H2	434	456	2.4e-3	SMART
ZnF_C2H2	462	484	1.2e-3	SMART
ZnF_C2H2	490	512	2.99e-4	SMART
ZnF_C2H2	518	540	5.5e-3	SMART
ZnF_C2H2	546	568	9.08e-4	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000109122
AA Change: F248S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000104750
Gene: ENSMUSG00000020364
AA Change: F248S

Domain	Start	End	E-Value	Type
KRAB	13	73	8.48e-36	SMART
ZnF_C2H2	183	205	1.12e-3	SMART
ZnF_C2H2	211	233	1.38e-3	SMART
ZnF_C2H2	239	261	9.73e-4	SMART
ZnF_C2H2	267	289	1.72e-4	SMART
ZnF_C2H2	320	342	1.47e-3	SMART
ZnF_C2H2	348	370	4.24e-4	SMART
ZnF_C2H2	376	398	2.79e-4	SMART
ZnF_C2H2	404	426	9.58e-3	SMART
ZnF_C2H2	432	454	2.4e-3	SMART
ZnF_C2H2	460	482	1.2e-3	SMART
ZnF_C2H2	488	510	2.99e-4	SMART
ZnF_C2H2	516	538	5.5e-3	SMART
ZnF_C2H2	544	566	9.08e-4	SMART

Meta Mutation Damage Score

0.8200

Coding Region Coverage

1x: 100.0%
3x: 100.0%
10x: 99.8%
20x: 99.3%

Validation Efficiency

98% (61/62)

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aass	T	A	6: 23,120,929 (GRCm39)	T112S	probably damaging	Het
Abca12	G	T	1: 71,298,950 (GRCm39)	S2320R	probably benign	Het
Abca7	TGGTGCGTGAG	TG	10: 79,838,424 (GRCm39)		probably benign	Het
Adh7	T	A	3: 137,932,136 (GRCm39)	I250N	probably damaging	Het
Albfm1	T	C	5: 90,740,747 (GRCm39)	V560A	possibly damaging	Het
Aoc1	T	A	6: 48,882,745 (GRCm39)	I229N	probably damaging	Het
C2cd6	A	T	1: 59,106,951 (GRCm39)	Y291*	probably null	Het
Cacnb4	T	C	2: 52,324,520 (GRCm39)	D514G	possibly damaging	Het
Ccdc202	A	G	14: 96,119,486 (GRCm39)	Q81R	possibly damaging	Het
Clec2g	A	G	6: 128,925,740 (GRCm39)	T50A	probably benign	Het
Col6a5	T	C	9: 105,741,458 (GRCm39)	E2487G	probably damaging	Het
D130040H23Rik	A	T	8: 69,752,887 (GRCm39)		probably null	Het
D6Ertd527e	G	A	6: 87,087,879 (GRCm39)	S14N	unknown	Het
Dchs1	G	A	7: 105,414,352 (GRCm39)	T821I	probably benign	Het
Dhcr24	T	C	4: 106,428,633 (GRCm39)	S138P	possibly damaging	Het
Dhrs9	G	A	2: 69,224,782 (GRCm39)	G157R	probably damaging	Het
Dnah5	T	A	15: 28,411,678 (GRCm39)	D3682E	possibly damaging	Het
Dst	T	C	1: 34,314,443 (GRCm39)		probably null	Het
Fat1	A	T	8: 45,403,261 (GRCm39)	H4L	probably benign	Het
Flnb	A	G	14: 7,939,113 (GRCm38)	I2319V	probably benign	Het
Foxe1	T	C	4: 46,344,578 (GRCm39)	W129R	probably damaging	Het
Foxred2	G	A	15: 77,827,550 (GRCm39)	P603L	probably benign	Het
Fshr	A	G	17: 89,293,641 (GRCm39)	S346P	probably damaging	Het
Galnt2	T	A	8: 125,070,134 (GRCm39)	S550R	possibly damaging	Het
Gpc2	A	G	5: 138,274,559 (GRCm39)	S312P	probably benign	Het
Gpr150	C	A	13: 76,204,511 (GRCm39)	A145S	probably benign	Het
Grk4	T	A	5: 34,867,553 (GRCm39)	W173R	probably damaging	Het
Hoxb9	C	G	11: 96,162,537 (GRCm39)	P57R	probably damaging	Het
Hsf5	A	G	11: 87,528,954 (GRCm39)	Q563R	probably benign	Het
Ighv1-58	A	G	12: 115,275,796 (GRCm39)	F114S	possibly damaging	Het
Klra9	T	A	6: 130,162,563 (GRCm39)	I158F	probably damaging	Het
Lrrc8d	T	C	5: 105,960,210 (GRCm39)	S207P	probably damaging	Het
Nbeal2	T	C	9: 110,459,320 (GRCm39)	E1929G	probably damaging	Het
Ncoa1	A	G	12: 4,346,221 (GRCm39)	M89T	probably benign	Het
Nkx2-4	T	C	2: 146,927,208 (GRCm39)	I20V	probably benign	Het
Nup214	T	C	2: 31,916,917 (GRCm39)	S1191P	possibly damaging	Het
Or2n1d	A	G	17: 38,646,855 (GRCm39)	D269G	probably benign	Het
Pfkp	T	A	13: 6,647,908 (GRCm39)	N556I	probably damaging	Het
Pidd1	A	T	7: 141,022,193 (GRCm39)	S199T	probably benign	Het
Pik3r2	T	A	8: 71,222,408 (GRCm39)	I515F	probably damaging	Het
Plcxd2	T	A	16: 45,785,524 (GRCm39)	I294F	probably damaging	Het
Prmt6	C	A	3: 110,158,303 (GRCm39)		probably benign	Het
Prpf8	A	G	11: 75,385,300 (GRCm39)	I812V	probably benign	Het
Rasa2	T	C	9: 96,462,537 (GRCm39)		probably null	Het
Rsad1	A	C	11: 94,435,288 (GRCm39)	D266E	probably benign	Het
Rsf1	GGCG	GGCGACGGCTGCG	7: 97,229,113 (GRCm39)		probably benign	Het
Shroom3	T	A	5: 93,088,705 (GRCm39)	V485E	probably damaging	Het
Siae	T	A	9: 37,556,196 (GRCm39)	Y451N	probably damaging	Het
Slc7a11	A	T	3: 50,335,476 (GRCm39)	I354N	probably damaging	Het
Spryd7	A	T	14: 61,783,129 (GRCm39)		probably null	Het
Srcap	A	G	7: 127,129,499 (GRCm39)		probably benign	Het
Svep1	T	A	4: 58,179,601 (GRCm39)	D214V	probably damaging	Het
Tmtc4	T	C	14: 123,209,289 (GRCm39)	I119V	probably benign	Het
Trim5	G	A	7: 103,927,633 (GRCm39)	T169I	probably benign	Het
Ttc33	T	C	15: 5,241,506 (GRCm39)	F83S	probably benign	Het
Ubr5	A	T	15: 37,997,431 (GRCm39)	S1741T	probably damaging	Het
Vmn2r111	T	C	17: 22,778,032 (GRCm39)	N549S	possibly damaging	Het
Wdcp	A	G	12: 4,907,975 (GRCm39)	N694S	probably benign	Het
Zfp174	T	A	16: 3,666,041 (GRCm39)	I102N	probably damaging	Het
Zfyve26	A	T	12: 79,302,098 (GRCm39)	C404S	probably damaging	Het
Zmynd8	A	T	2: 165,723,000 (GRCm39)		probably benign	Het

Other mutations in Zfp354a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00326:Zfp354a	APN	11	50,960,190 (GRCm39)	missense	probably benign	0.00
IGL00518:Zfp354a	APN	11	50,961,381 (GRCm39)	missense	probably damaging	1.00
IGL01872:Zfp354a	APN	11	50,960,164 (GRCm39)	missense	possibly damaging	0.59
P0026:Zfp354a	UTSW	11	50,952,325 (GRCm39)	missense	probably null	0.40
R0063:Zfp354a	UTSW	11	50,960,398 (GRCm39)	missense	probably damaging	1.00
R0063:Zfp354a	UTSW	11	50,960,398 (GRCm39)	missense	probably damaging	1.00
R1013:Zfp354a	UTSW	11	50,951,677 (GRCm39)	splice site	probably benign
R1498:Zfp354a	UTSW	11	50,961,073 (GRCm39)	missense	probably damaging	1.00
R2093:Zfp354a	UTSW	11	50,960,551 (GRCm39)	missense	probably damaging	0.99
R4630:Zfp354a	UTSW	11	50,961,045 (GRCm39)	missense	probably damaging	1.00
R4691:Zfp354a	UTSW	11	50,961,064 (GRCm39)	missense	probably damaging	1.00
R5224:Zfp354a	UTSW	11	50,960,876 (GRCm39)	missense	probably damaging	1.00
R5728:Zfp354a	UTSW	11	50,961,432 (GRCm39)	missense	probably damaging	1.00
R6209:Zfp354a	UTSW	11	50,951,815 (GRCm39)	critical splice donor site	probably null
R6831:Zfp354a	UTSW	11	50,961,381 (GRCm39)	missense	probably damaging	1.00
R7206:Zfp354a	UTSW	11	50,961,073 (GRCm39)	missense	probably damaging	1.00
R7617:Zfp354a	UTSW	11	50,960,751 (GRCm39)	missense	probably benign	0.03
R8115:Zfp354a	UTSW	11	50,960,490 (GRCm39)	missense	probably benign	0.28
R8835:Zfp354a	UTSW	11	50,960,628 (GRCm39)	nonsense	probably null
R8884:Zfp354a	UTSW	11	50,950,805 (GRCm39)	start gained	probably benign
R9157:Zfp354a	UTSW	11	50,960,788 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CTGAGCCCAAAGTCACATAGAG -3'
(R):5'- GAAGTAGATGCCTTCCTCCC -3'

Sequencing Primer
(F):5'- CCCCAGATAAACGCTATAAATGTAG -3'
(R):5'- CCTCCCTGGGTTATATTTATAAGGG -3'

Posted On

2019-12-03