Mutagenetix > Incidental Mutation

Incidental Mutation 'R8159:Gigyf1'

633429

Institutional Source

Beutler Lab

Gene Symbol

Gigyf1

Ensembl Gene

ENSMUSG00000029714

Gene Name

GRB10 interacting GYF protein 1

Synonyms

Perq1

MMRRC Submission

067585-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.470) question?

Stock #

R8159 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

137516810-137526197 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 137520457 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Valine at position 423 (D423V)

Ref Sequence

ENSEMBL: ENSMUSP00000031727 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031727] [ENSMUST00000111038] [ENSMUST00000197624]

AlphaFold

Q99MR1

Predicted Effect

unknown
Transcript: ENSMUST00000031727
AA Change: D423V

SMART Domains

Protein: ENSMUSP00000031727
Gene: ENSMUSG00000029714
AA Change: D423V

Domain	Start	End	E-Value	Type
low complexity region	17	32	N/A	INTRINSIC
low complexity region	69	87	N/A	INTRINSIC
low complexity region	114	129	N/A	INTRINSIC
low complexity region	253	269	N/A	INTRINSIC
low complexity region	323	352	N/A	INTRINSIC
low complexity region	360	379	N/A	INTRINSIC
coiled coil region	424	450	N/A	INTRINSIC
GYF	477	532	1.6e-25	SMART
low complexity region	534	543	N/A	INTRINSIC
low complexity region	553	576	N/A	INTRINSIC
low complexity region	597	613	N/A	INTRINSIC
coiled coil region	671	735	N/A	INTRINSIC
low complexity region	748	759	N/A	INTRINSIC
low complexity region	826	837	N/A	INTRINSIC
low complexity region	848	877	N/A	INTRINSIC
low complexity region	881	893	N/A	INTRINSIC
coiled coil region	957	984	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000111038

SMART Domains

Protein: ENSMUSP00000106667
Gene: ENSMUSG00000029711

Domain	Start	End	E-Value	Type
signal peptide	1	23	N/A	INTRINSIC
Pfam:EPO_TPO	30	191	2.8e-69	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000197624

SMART Domains

Protein: ENSMUSP00000143670
Gene: ENSMUSG00000029714

Domain	Start	End	E-Value	Type
low complexity region	17	32	N/A	INTRINSIC
low complexity region	69	87	N/A	INTRINSIC
low complexity region	114	129	N/A	INTRINSIC

Meta Mutation Damage Score

0.1106

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.6%

Validation Efficiency

100% (49/49)

Allele List at MGI

Other mutations in this stock

Total: 46 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl2fm1	C	A	3: 59,843,843 (GRCm39)	P179Q	probably damaging	Het
Abcc1	C	T	16: 14,290,794 (GRCm39)	T1468I	probably damaging	Het
Adrb3	A	C	8: 27,718,099 (GRCm39)	C117G	probably benign	Het
Aff4	A	T	11: 53,302,721 (GRCm39)	S1065C	possibly damaging	Het
Agrn	G	A	4: 156,256,825 (GRCm39)	A1260V	probably benign	Het
Auts2	A	G	5: 131,488,963 (GRCm39)		probably null	Het
BC005537	T	A	13: 24,993,916 (GRCm39)	H159Q	probably benign	Het
Cacna2d4	A	G	6: 119,274,488 (GRCm39)	D625G	probably benign	Het
Cd72	A	G	4: 43,450,174 (GRCm39)	Y245H	probably damaging	Het
Ceacam20	G	T	7: 19,710,109 (GRCm39)	V378L	probably damaging	Het
Chpf	C	T	1: 75,455,436 (GRCm39)	R105K	probably null	Het
Chst9	A	T	18: 15,585,365 (GRCm39)	Y399*	probably null	Het
Cntn5	A	G	9: 10,145,386 (GRCm39)	I108T	possibly damaging	Het
Col14a1	A	G	15: 55,291,324 (GRCm39)	T931A	unknown	Het
D630045J12Rik	T	C	6: 38,105,410 (GRCm39)	H1890R	probably damaging	Het
Dkk2	T	C	3: 131,880,739 (GRCm39)	I128T	probably benign	Het
Ece2	C	T	16: 20,430,534 (GRCm39)	P54S	probably damaging	Het
Fhip2a	T	C	19: 57,372,697 (GRCm39)		probably null	Het
Fry	A	T	5: 150,322,998 (GRCm39)	T1050S	probably benign	Het
Gfra2	A	G	14: 71,133,397 (GRCm39)	K76E	probably damaging	Het
Gpr180	G	A	14: 118,391,302 (GRCm39)	G235R	probably damaging	Het
Herc1	A	G	9: 66,369,003 (GRCm39)	Q403R	probably null	Het
Hes5	A	G	4: 155,045,502 (GRCm39)	N17S	probably benign	Het
Insrr	T	A	3: 87,707,735 (GRCm39)	L59H	probably damaging	Het
Irs1	A	C	1: 82,266,290 (GRCm39)	I642S	probably damaging	Het
Mettl22	T	C	16: 8,306,633 (GRCm39)	V363A	probably benign	Het
Notch2	A	G	3: 98,028,238 (GRCm39)	H983R	possibly damaging	Het
Nynrin	T	G	14: 56,100,587 (GRCm39)	S126A	probably damaging	Het
Nynrin	A	T	14: 56,102,517 (GRCm39)	M729L	probably benign	Het
Or51v14	G	A	7: 103,261,347 (GRCm39)	T71I	possibly damaging	Het
Or7e178	A	C	9: 20,226,015 (GRCm39)	I67S	possibly damaging	Het
Otof	C	T	5: 30,537,538 (GRCm39)	G1257D	probably benign	Het
Pals2	A	T	6: 50,171,527 (GRCm39)	E392V	probably benign	Het
Pcdhgc5	A	G	18: 37,954,175 (GRCm39)	E483G	probably benign	Het
Phldb2	T	C	16: 45,680,747 (GRCm39)	E20G	possibly damaging	Het
Ptprz1	A	G	6: 23,001,662 (GRCm39)	I1251V	probably benign	Het
Rfx2	A	T	17: 57,110,605 (GRCm39)	M127K	probably benign	Het
Slc9a3	A	G	13: 74,312,407 (GRCm39)	N668S	probably benign	Het
Smg6	G	A	11: 74,929,465 (GRCm39)	V965M	probably damaging	Het
Spen	A	T	4: 141,202,314 (GRCm39)	H2104Q	possibly damaging	Het
Svep1	C	T	4: 58,069,396 (GRCm39)	E2797K	possibly damaging	Het
Svep1	T	C	4: 58,087,815 (GRCm39)	S1755G	probably benign	Het
Sycp2	A	C	2: 177,996,770 (GRCm39)	S1144R	probably damaging	Het
Tsen54	T	A	11: 115,711,804 (GRCm39)	L407*	probably null	Het
Uba1y	T	A	Y: 828,806 (GRCm39)	I538K	possibly damaging	Het
Vil1	C	A	1: 74,463,136 (GRCm39)	H440N	probably benign	Het

Other mutations in Gigyf1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00230:Gigyf1	APN	5	137,521,007 (GRCm39)	unclassified	probably benign
IGL00326:Gigyf1	APN	5	137,517,210 (GRCm39)	utr 5 prime	probably benign
IGL00935:Gigyf1	APN	5	137,523,096 (GRCm39)	missense	possibly damaging	0.95
IGL01717:Gigyf1	APN	5	137,523,953 (GRCm39)	missense	probably damaging	1.00
IGL02090:Gigyf1	APN	5	137,523,826 (GRCm39)	splice site	probably null
IGL02354:Gigyf1	APN	5	137,517,989 (GRCm39)	splice site	probably benign
IGL02361:Gigyf1	APN	5	137,517,989 (GRCm39)	splice site	probably benign
IGL03370:Gigyf1	APN	5	137,523,952 (GRCm39)	missense	possibly damaging	0.93
PIT4354001:Gigyf1	UTSW	5	137,522,366 (GRCm39)	missense	unknown
R1415:Gigyf1	UTSW	5	137,517,478 (GRCm39)	splice site	probably null
R1764:Gigyf1	UTSW	5	137,520,770 (GRCm39)	unclassified	probably benign
R2259:Gigyf1	UTSW	5	137,518,594 (GRCm39)	missense	possibly damaging	0.93
R2260:Gigyf1	UTSW	5	137,518,594 (GRCm39)	missense	possibly damaging	0.93
R4656:Gigyf1	UTSW	5	137,523,477 (GRCm39)	nonsense	probably null
R4717:Gigyf1	UTSW	5	137,523,494 (GRCm39)	missense	probably damaging	1.00
R4732:Gigyf1	UTSW	5	137,523,032 (GRCm39)	missense	probably benign	0.39
R4733:Gigyf1	UTSW	5	137,523,032 (GRCm39)	missense	probably benign	0.39
R4942:Gigyf1	UTSW	5	137,523,952 (GRCm39)	missense	possibly damaging	0.93
R5338:Gigyf1	UTSW	5	137,521,422 (GRCm39)	unclassified	probably benign
R5503:Gigyf1	UTSW	5	137,521,729 (GRCm39)	unclassified	probably benign
R5790:Gigyf1	UTSW	5	137,522,517 (GRCm39)	unclassified	probably benign
R5888:Gigyf1	UTSW	5	137,523,959 (GRCm39)	missense	probably damaging	1.00
R5955:Gigyf1	UTSW	5	137,521,769 (GRCm39)	splice site	probably null
R6544:Gigyf1	UTSW	5	137,523,321 (GRCm39)	missense	probably damaging	1.00
R7227:Gigyf1	UTSW	5	137,522,085 (GRCm39)	missense	unknown
R7493:Gigyf1	UTSW	5	137,523,795 (GRCm39)	missense	probably damaging	0.98
R7660:Gigyf1	UTSW	5	137,519,231 (GRCm39)	missense	probably benign	0.23
R7959:Gigyf1	UTSW	5	137,522,581 (GRCm39)	missense	probably damaging	1.00
R8026:Gigyf1	UTSW	5	137,523,740 (GRCm39)	missense	probably damaging	1.00
R8552:Gigyf1	UTSW	5	137,521,401 (GRCm39)	unclassified	probably benign
R8936:Gigyf1	UTSW	5	137,523,469 (GRCm39)	missense	probably damaging	0.99
R9622:Gigyf1	UTSW	5	137,522,926 (GRCm39)	nonsense	probably null

Predicted Primers

PCR Primer
(F):5'- AGTGGAGAAAGAGCTGCCTC -3'
(R):5'- TTCTCTGCCTCCTGGAAGTCAG -3'

Sequencing Primer
(F):5'- AAAGAGCTGCCTCCTGCTGAAG -3'
(R):5'- TCAGGAAAAGAGGGAGTCTGAGC -3'

Posted On

2020-07-13