Mutagenetix > Incidental Mutation

Incidental Mutation 'R8245:Bpifb9a'

640796

Institutional Source

Beutler Lab

Gene Symbol

Bpifb9a

Ensembl Gene

ENSMUSG00000067998

Gene Name

BPI fold containing family B, member 9A

Synonyms

4833413D08Rik, vomeromodulin

MMRRC Submission

067673-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R8245 (G1)

Quality Score

199.009

Status

Not validated

Chromosome

Chromosomal Location

154099799-154113165 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 154104646 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glycine to Arginine at position 261 (G261R)

Ref Sequence

ENSEMBL: ENSMUSP00000086314 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000088924]

AlphaFold

Q80XI7

Predicted Effect

probably benign
Transcript: ENSMUST00000088924
AA Change: G261R

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)

SMART Domains

Protein: ENSMUSP00000086314
Gene: ENSMUSG00000067998
AA Change: G261R

Domain	Start	End	E-Value	Type
low complexity region	60	77	N/A	INTRINSIC
low complexity region	122	157	N/A	INTRINSIC
low complexity region	167	181	N/A	INTRINSIC
low complexity region	184	203	N/A	INTRINSIC
Pfam:LBP_BPI_CETP	216	377	1.1e-11	PFAM

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.7%
20x: 99.0%

Validation Efficiency

98% (63/64)

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abcc9	T	A	6: 142,539,870 (GRCm39)		probably null	Het
Adam4	A	T	12: 81,466,657 (GRCm39)	C655S	probably damaging	Het
Adamts13	A	C	2: 26,880,568 (GRCm39)	D717A	probably damaging	Het
Atf7ip2	A	G	16: 10,019,262 (GRCm39)	N30S	possibly damaging	Het
Bmp8b	T	C	4: 123,008,532 (GRCm39)	V166A	probably benign	Het
Cdipt	G	T	7: 126,578,732 (GRCm39)	M174I	probably benign	Het
Cep128	T	C	12: 90,966,419 (GRCm39)	T1063A	probably benign	Het
Ciao1	A	G	2: 127,088,404 (GRCm39)	Y140H	probably damaging	Het
Cngb1	A	G	8: 96,024,408 (GRCm39)	S217P	unknown	Het
Cnot2	T	A	10: 116,346,294 (GRCm39)	I103F	probably benign	Het
Col27a1	T	G	4: 63,144,040 (GRCm39)	V576G	probably damaging	Het
Dapk1	T	A	13: 60,878,710 (GRCm39)	H566Q	probably benign	Het
Dhrs2	T	A	14: 55,478,637 (GRCm39)	C261S	possibly damaging	Het
Ercc4	G	C	16: 12,948,001 (GRCm39)	R406P	probably benign	Het
Fer1l4	A	G	2: 155,886,934 (GRCm39)		probably null	Het
Fhod3	T	A	18: 25,246,673 (GRCm39)	F1293Y	probably damaging	Het
Fsip1	T	A	2: 118,075,359 (GRCm39)	K218M	unknown	Het
Fsip2	G	T	2: 82,811,346 (GRCm39)	S2555I	possibly damaging	Het
Gfpt2	A	G	11: 49,714,785 (GRCm39)	K358E	probably benign	Het
Gm9637	A	T	14: 19,402,598 (GRCm38)	V1D	noncoding transcript	Het
H2-M10.6	T	C	17: 37,124,155 (GRCm39)		probably null	Het
Hand2	A	G	8: 57,774,994 (GRCm39)	Y18C	probably damaging	Het
Helz2	A	T	2: 180,879,895 (GRCm39)	V607E	probably damaging	Het
Hps5	G	A	7: 46,418,485 (GRCm39)	R862*	probably null	Het
Ildr1	A	G	16: 36,529,883 (GRCm39)	D90G	probably damaging	Het
Ints12	A	G	3: 132,814,633 (GRCm39)	N280S	probably benign	Het
Ippk	C	T	13: 49,599,818 (GRCm39)	P226S		Het
Itpr2	T	A	6: 146,274,604 (GRCm39)	K859N	probably damaging	Het
Lhx9	G	T	1: 138,766,179 (GRCm39)	A212D	probably benign	Het
Myo6	C	T	9: 80,162,229 (GRCm39)	T322I	unknown	Het
Ndufaf4	A	G	4: 24,898,648 (GRCm39)	D71G	probably benign	Het
Nrp1	T	A	8: 129,214,434 (GRCm39)	S641T	probably benign	Het
Nudt7	A	T	8: 114,863,080 (GRCm39)	N37I	probably damaging	Het
Obscn	T	A	11: 58,913,066 (GRCm39)	I271F		Het
Or2ag16	T	C	7: 106,352,374 (GRCm39)	T74A	probably benign	Het
Or4d2b	G	A	11: 87,780,443 (GRCm39)	S93F	probably damaging	Het
Or6c5b	T	C	10: 129,245,975 (GRCm39)	S247P	probably damaging	Het
Or7g18	T	C	9: 18,787,126 (GRCm39)	Y168H	probably benign	Het
Or9g4b	A	G	2: 85,616,119 (GRCm39)	E88G	probably benign	Het
Oxa1l	T	C	14: 54,605,274 (GRCm39)	S317P	probably damaging	Het
Poglut2	A	T	1: 44,156,226 (GRCm39)	H120Q	probably benign	Het
Polr2a	C	T	11: 69,630,779 (GRCm39)	R1213H	probably damaging	Het
Postn	A	T	3: 54,283,468 (GRCm39)	S516C	probably null	Het
Rabep2	A	G	7: 126,039,580 (GRCm39)	T336A	possibly damaging	Het
Ralgapb	G	A	2: 158,285,256 (GRCm39)	C585Y	probably damaging	Het
Rexo4	A	G	2: 26,850,350 (GRCm39)	S276P	probably damaging	Het
Rsf1	GGCGGCGGC	GGCGGCGGCTGCGGCGGC	7: 97,229,122 (GRCm39)		probably benign	Het
Sall3	G	A	18: 81,016,969 (GRCm39)	P320S	probably benign	Het
Sipa1l3	A	G	7: 29,099,789 (GRCm39)	L160P	probably damaging	Het
Sphkap	A	G	1: 83,256,492 (GRCm39)	F419S	probably benign	Het
Stag1	C	A	9: 100,811,946 (GRCm39)	T808K	probably benign	Het
Stam2	G	T	2: 52,604,931 (GRCm39)	N201K	possibly damaging	Het
Stat1	G	A	1: 52,194,178 (GRCm39)	R704Q	probably benign	Het
Tacc2	A	G	7: 130,331,303 (GRCm39)	D2236G	probably damaging	Het
Thsd7a	T	A	6: 12,379,592 (GRCm39)	Y944F		Het
Tmem225	G	T	9: 40,061,955 (GRCm39)	V190F	probably damaging	Het
Tonsl	A	T	15: 76,521,022 (GRCm39)	V400D	probably benign	Het
Tpp2	G	A	1: 44,022,712 (GRCm39)	G971D	probably damaging	Het
Trh	C	T	6: 92,220,050 (GRCm39)	V89I	probably benign	Het
Txlnb	A	G	10: 17,717,205 (GRCm39)	D404G	probably damaging	Het
Uggt1	A	G	1: 36,204,645 (GRCm39)	V990A	probably damaging	Het
Vmn1r179	T	A	7: 23,628,396 (GRCm39)	Y196N	possibly damaging	Het
Vmn2r8	T	C	5: 108,945,936 (GRCm39)	D557G	probably damaging	Het
Zfp516	G	T	18: 82,974,458 (GRCm39)	G219C	probably damaging	Het

Other mutations in Bpifb9a

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00833:Bpifb9a	APN	2	154,106,195 (GRCm39)	nonsense	probably null
IGL00899:Bpifb9a	APN	2	154,106,647 (GRCm39)	splice site	probably null
IGL01998:Bpifb9a	APN	2	154,110,120 (GRCm39)	critical splice donor site	probably null
IGL02158:Bpifb9a	APN	2	154,108,733 (GRCm39)	splice site	probably benign
IGL02331:Bpifb9a	APN	2	154,104,307 (GRCm39)	missense	possibly damaging	0.45
R0066:Bpifb9a	UTSW	2	154,108,761 (GRCm39)	missense	possibly damaging	0.95
R0480:Bpifb9a	UTSW	2	154,106,608 (GRCm39)	missense	probably benign	0.33
R0545:Bpifb9a	UTSW	2	154,103,870 (GRCm39)	nonsense	probably null
R0904:Bpifb9a	UTSW	2	154,106,145 (GRCm39)	splice site	probably benign
R1028:Bpifb9a	UTSW	2	154,104,327 (GRCm39)	missense	possibly damaging	0.45
R1158:Bpifb9a	UTSW	2	154,104,184 (GRCm39)	missense	probably benign	0.08
R1465:Bpifb9a	UTSW	2	154,112,941 (GRCm39)	missense	possibly damaging	0.85
R1465:Bpifb9a	UTSW	2	154,112,941 (GRCm39)	missense	possibly damaging	0.85
R1902:Bpifb9a	UTSW	2	154,103,911 (GRCm39)	missense	probably benign	0.00
R2015:Bpifb9a	UTSW	2	154,110,120 (GRCm39)	critical splice donor site	probably null
R2152:Bpifb9a	UTSW	2	154,102,055 (GRCm39)	missense	probably benign	0.28
R2206:Bpifb9a	UTSW	2	154,106,161 (GRCm39)	splice site	probably null
R5410:Bpifb9a	UTSW	2	154,112,155 (GRCm39)	missense	probably benign	0.05
R5731:Bpifb9a	UTSW	2	154,104,163 (GRCm39)	missense	possibly damaging	0.87
R5818:Bpifb9a	UTSW	2	154,104,215 (GRCm39)	missense	probably damaging	0.98
R5865:Bpifb9a	UTSW	2	154,108,756 (GRCm39)	missense	probably benign	0.26
R6564:Bpifb9a	UTSW	2	154,102,098 (GRCm39)	missense	probably benign	0.00
R7291:Bpifb9a	UTSW	2	154,109,616 (GRCm39)	missense	probably damaging	1.00
R7294:Bpifb9a	UTSW	2	154,109,616 (GRCm39)	missense	probably damaging	1.00
R7295:Bpifb9a	UTSW	2	154,109,616 (GRCm39)	missense	probably damaging	1.00
R7453:Bpifb9a	UTSW	2	154,106,615 (GRCm39)	missense	probably damaging	0.99
R7570:Bpifb9a	UTSW	2	154,104,183 (GRCm39)	missense	possibly damaging	0.46
R8187:Bpifb9a	UTSW	2	154,111,377 (GRCm39)	missense	probably benign	0.00
R8459:Bpifb9a	UTSW	2	154,102,153 (GRCm39)	missense	probably damaging	0.98
R8481:Bpifb9a	UTSW	2	154,111,399 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- AGGGCCAGGATTTCTTGAC -3'
(R):5'- ATAGTGTAAGCCTGGCTGGG -3'

Sequencing Primer
(F):5'- GGCCAGGATTTCTTGACCTCAAAC -3'
(R):5'- GGGAAGCCAGTCCTCTTCTAACTATG -3'

Posted On

2020-07-28