Incidental Mutation 'R0448:Crocc'
ID |
158496 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Crocc
|
Ensembl Gene |
ENSMUSG00000040860 |
Gene Name |
ciliary rootlet coiled-coil, rootletin |
Synonyms |
|
MMRRC Submission |
038648-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.174)
|
Stock # |
R0448 (G1)
|
Quality Score |
66 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
140743948-140787861 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 140769502 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Glutamic Acid
at position 283
(D283E)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000126543
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000040222]
[ENSMUST00000097816]
[ENSMUST00000102491]
[ENSMUST00000144196]
[ENSMUST00000168157]
|
AlphaFold |
Q8CJ40 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000040222
AA Change: D283E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000037679 Gene: ENSMUSG00000040860 AA Change: D283E
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000097816
AA Change: D283E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000095425 Gene: ENSMUSG00000040860 AA Change: D283E
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000102491
AA Change: D447E
PolyPhen 2
Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
|
SMART Domains |
Protein: ENSMUSP00000099549 Gene: ENSMUSG00000040860 AA Change: D447E
Domain | Start | End | E-Value | Type |
low complexity region
|
2 |
15 |
N/A |
INTRINSIC |
low complexity region
|
77 |
93 |
N/A |
INTRINSIC |
Pfam:Rootletin
|
158 |
336 |
9.7e-65 |
PFAM |
low complexity region
|
354 |
381 |
N/A |
INTRINSIC |
internal_repeat_2
|
462 |
479 |
1.77e-6 |
PROSPERO |
low complexity region
|
493 |
514 |
N/A |
INTRINSIC |
internal_repeat_3
|
527 |
557 |
8.63e-6 |
PROSPERO |
internal_repeat_6
|
533 |
556 |
4.21e-5 |
PROSPERO |
low complexity region
|
561 |
575 |
N/A |
INTRINSIC |
low complexity region
|
576 |
594 |
N/A |
INTRINSIC |
low complexity region
|
617 |
638 |
N/A |
INTRINSIC |
low complexity region
|
788 |
807 |
N/A |
INTRINSIC |
low complexity region
|
863 |
880 |
N/A |
INTRINSIC |
low complexity region
|
1009 |
1039 |
N/A |
INTRINSIC |
internal_repeat_4
|
1050 |
1068 |
4.21e-5 |
PROSPERO |
internal_repeat_7
|
1057 |
1070 |
9.31e-5 |
PROSPERO |
internal_repeat_2
|
1057 |
1074 |
1.77e-6 |
PROSPERO |
internal_repeat_4
|
1061 |
1078 |
4.21e-5 |
PROSPERO |
internal_repeat_1
|
1076 |
1101 |
3.36e-8 |
PROSPERO |
internal_repeat_7
|
1192 |
1205 |
9.31e-5 |
PROSPERO |
low complexity region
|
1271 |
1288 |
N/A |
INTRINSIC |
internal_repeat_5
|
1302 |
1328 |
4.21e-5 |
PROSPERO |
low complexity region
|
1354 |
1365 |
N/A |
INTRINSIC |
low complexity region
|
1417 |
1433 |
N/A |
INTRINSIC |
low complexity region
|
1434 |
1453 |
N/A |
INTRINSIC |
low complexity region
|
1461 |
1473 |
N/A |
INTRINSIC |
internal_repeat_6
|
1697 |
1720 |
4.21e-5 |
PROSPERO |
low complexity region
|
1723 |
1740 |
N/A |
INTRINSIC |
coiled coil region
|
1744 |
1871 |
N/A |
INTRINSIC |
coiled coil region
|
1892 |
1996 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000126863
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000144196
|
SMART Domains |
Protein: ENSMUSP00000120555 Gene: ENSMUSG00000040860
Domain | Start | End | E-Value | Type |
coiled coil region
|
1 |
42 |
N/A |
INTRINSIC |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000168157
AA Change: D283E
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000126543 Gene: ENSMUSG00000040860 AA Change: D283E
Domain | Start | End | E-Value | Type |
Pfam:Rootletin
|
1 |
173 |
6.1e-48 |
PFAM |
low complexity region
|
190 |
217 |
N/A |
INTRINSIC |
internal_repeat_2
|
298 |
315 |
1.08e-6 |
PROSPERO |
low complexity region
|
329 |
350 |
N/A |
INTRINSIC |
internal_repeat_3
|
363 |
393 |
5.38e-6 |
PROSPERO |
internal_repeat_6
|
369 |
392 |
2.67e-5 |
PROSPERO |
low complexity region
|
397 |
411 |
N/A |
INTRINSIC |
low complexity region
|
412 |
430 |
N/A |
INTRINSIC |
low complexity region
|
453 |
474 |
N/A |
INTRINSIC |
low complexity region
|
624 |
643 |
N/A |
INTRINSIC |
low complexity region
|
699 |
716 |
N/A |
INTRINSIC |
low complexity region
|
845 |
875 |
N/A |
INTRINSIC |
internal_repeat_4
|
886 |
904 |
2.67e-5 |
PROSPERO |
internal_repeat_7
|
893 |
906 |
5.96e-5 |
PROSPERO |
internal_repeat_2
|
893 |
910 |
1.08e-6 |
PROSPERO |
internal_repeat_4
|
897 |
914 |
2.67e-5 |
PROSPERO |
internal_repeat_1
|
912 |
937 |
1.97e-8 |
PROSPERO |
internal_repeat_7
|
1028 |
1041 |
5.96e-5 |
PROSPERO |
low complexity region
|
1107 |
1124 |
N/A |
INTRINSIC |
internal_repeat_5
|
1138 |
1164 |
2.67e-5 |
PROSPERO |
low complexity region
|
1190 |
1201 |
N/A |
INTRINSIC |
low complexity region
|
1253 |
1269 |
N/A |
INTRINSIC |
low complexity region
|
1270 |
1289 |
N/A |
INTRINSIC |
low complexity region
|
1297 |
1309 |
N/A |
INTRINSIC |
internal_repeat_6
|
1533 |
1556 |
2.67e-5 |
PROSPERO |
low complexity region
|
1559 |
1576 |
N/A |
INTRINSIC |
coiled coil region
|
1580 |
1707 |
N/A |
INTRINSIC |
coiled coil region
|
1728 |
1832 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.0931 |
Coding Region Coverage |
- 1x: 99.1%
- 3x: 98.3%
- 10x: 96.3%
- 20x: 93.1%
|
Validation Efficiency |
100% (74/74) |
MGI Phenotype |
PHENOTYPE: Mice homozygous for a null mutation show no apparent functional deficits in phototransduction and ciliary beating in sensory and motile cilia. However, photoreceptors degenerate over time, and lungs appear prone to pathological changes. [provided by MGI curators]
|
Allele List at MGI |
All alleles(4) : Targeted, knock-out(1) Gene trapped(3) |
Other mutations in this stock |
Total: 72 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abcc5 |
G |
A |
16: 20,218,687 (GRCm39) |
R232C |
probably damaging |
Het |
Adam9 |
A |
G |
8: 25,454,926 (GRCm39) |
S732P |
probably damaging |
Het |
Add2 |
G |
A |
6: 86,069,901 (GRCm39) |
V140I |
probably benign |
Het |
Ahi1 |
G |
A |
10: 20,847,974 (GRCm39) |
G461S |
probably damaging |
Het |
Aoc1l2 |
A |
T |
6: 48,909,991 (GRCm39) |
S643C |
probably damaging |
Het |
Arhgef7 |
A |
G |
8: 11,869,659 (GRCm39) |
T432A |
possibly damaging |
Het |
Arsi |
T |
C |
18: 61,050,374 (GRCm39) |
I419T |
probably damaging |
Het |
Brca1 |
G |
A |
11: 101,399,047 (GRCm39) |
P1515L |
possibly damaging |
Het |
Brcc3 |
T |
A |
X: 74,493,647 (GRCm39) |
L222* |
probably null |
Het |
Brpf3 |
A |
T |
17: 29,025,010 (GRCm39) |
T28S |
probably benign |
Het |
Cdc20b |
T |
A |
13: 113,215,191 (GRCm39) |
V253E |
probably damaging |
Het |
Cnot6l |
T |
A |
5: 96,227,905 (GRCm39) |
S443C |
probably benign |
Het |
Copg1 |
G |
A |
6: 87,881,908 (GRCm39) |
A587T |
probably benign |
Het |
Crebrf |
A |
G |
17: 26,962,076 (GRCm39) |
D391G |
probably benign |
Het |
Cryga |
T |
C |
1: 65,142,318 (GRCm39) |
N25S |
probably benign |
Het |
Csnk1g1 |
T |
C |
9: 65,888,230 (GRCm39) |
F90L |
possibly damaging |
Het |
Cyp2j6 |
A |
G |
4: 96,433,965 (GRCm39) |
V115A |
probably benign |
Het |
Cyp3a11 |
T |
C |
5: 145,799,204 (GRCm39) |
I328V |
probably benign |
Het |
Dchs1 |
C |
A |
7: 105,415,134 (GRCm39) |
E683D |
probably benign |
Het |
Dnah9 |
T |
C |
11: 65,809,539 (GRCm39) |
|
probably benign |
Het |
Dqx1 |
T |
C |
6: 83,037,326 (GRCm39) |
S330P |
probably damaging |
Het |
Epg5 |
A |
G |
18: 78,066,580 (GRCm39) |
Y2160C |
probably damaging |
Het |
Ercc5 |
T |
C |
1: 44,213,100 (GRCm39) |
L742P |
probably damaging |
Het |
Fcgbpl1 |
T |
C |
7: 27,839,660 (GRCm39) |
I491T |
probably benign |
Het |
Flt1 |
C |
T |
5: 147,503,204 (GRCm39) |
|
probably benign |
Het |
Grip2 |
A |
G |
6: 91,756,194 (GRCm39) |
S498P |
probably damaging |
Het |
H2-T22 |
A |
G |
17: 36,353,278 (GRCm39) |
L14P |
possibly damaging |
Het |
Hephl1 |
C |
T |
9: 14,988,222 (GRCm39) |
G629S |
probably damaging |
Het |
Hsdl2 |
T |
A |
4: 59,606,523 (GRCm39) |
M162K |
unknown |
Het |
Kcnh8 |
C |
A |
17: 53,284,648 (GRCm39) |
|
probably null |
Het |
Krt76 |
T |
C |
15: 101,799,082 (GRCm39) |
Q201R |
probably damaging |
Het |
Lrpprc |
A |
T |
17: 85,078,322 (GRCm39) |
Y319N |
probably benign |
Het |
Lrrk2 |
T |
G |
15: 91,593,508 (GRCm39) |
I489R |
probably damaging |
Het |
Mboat1 |
G |
T |
13: 30,386,393 (GRCm39) |
D136Y |
probably damaging |
Het |
Mcmdc2 |
T |
C |
1: 10,010,767 (GRCm39) |
*682Q |
probably null |
Het |
Msx2 |
C |
A |
13: 53,622,431 (GRCm39) |
R193L |
probably damaging |
Het |
Nfatc4 |
T |
G |
14: 56,069,111 (GRCm39) |
D625E |
possibly damaging |
Het |
Nup153 |
T |
C |
13: 46,870,657 (GRCm39) |
E86G |
probably benign |
Het |
Or2g7 |
G |
T |
17: 38,378,563 (GRCm39) |
R167L |
probably benign |
Het |
Or4k45 |
T |
A |
2: 111,395,559 (GRCm39) |
I77F |
probably benign |
Het |
Pard3b |
T |
C |
1: 62,205,628 (GRCm39) |
L474P |
probably damaging |
Het |
Pate11 |
T |
A |
9: 36,388,412 (GRCm39) |
M79K |
probably benign |
Het |
Pggt1b |
A |
T |
18: 46,396,039 (GRCm39) |
|
probably benign |
Het |
Pik3r2 |
A |
G |
8: 71,224,688 (GRCm39) |
|
probably benign |
Het |
Prr14 |
A |
G |
7: 127,073,898 (GRCm39) |
|
probably benign |
Het |
Rcbtb2 |
T |
C |
14: 73,415,869 (GRCm39) |
|
probably benign |
Het |
Rufy2 |
G |
A |
10: 62,840,515 (GRCm39) |
D429N |
probably benign |
Het |
S1pr5 |
T |
A |
9: 21,155,503 (GRCm39) |
T308S |
probably damaging |
Het |
Sephs1 |
A |
G |
2: 4,904,371 (GRCm39) |
T250A |
probably benign |
Het |
Serpina12 |
A |
G |
12: 104,004,354 (GRCm39) |
S93P |
probably benign |
Het |
Serpinb1b |
T |
G |
13: 33,273,675 (GRCm39) |
H123Q |
probably benign |
Het |
Sftpc |
C |
T |
14: 70,760,120 (GRCm39) |
V46I |
probably benign |
Het |
Skint8 |
T |
A |
4: 111,794,087 (GRCm39) |
V159D |
probably damaging |
Het |
Slc25a11 |
T |
C |
11: 70,536,405 (GRCm39) |
N134S |
probably benign |
Het |
Slc25a24 |
T |
C |
3: 109,064,332 (GRCm39) |
|
probably benign |
Het |
Sorl1 |
C |
G |
9: 41,915,384 (GRCm39) |
V1282L |
probably damaging |
Het |
Sptan1 |
T |
A |
2: 29,916,822 (GRCm39) |
I2170N |
probably damaging |
Het |
Syne4 |
A |
G |
7: 30,014,345 (GRCm39) |
|
probably benign |
Het |
Tcam1 |
G |
A |
11: 106,174,904 (GRCm39) |
E120K |
probably benign |
Het |
Tg |
C |
A |
15: 66,636,291 (GRCm39) |
P626Q |
probably damaging |
Het |
Thoc6 |
T |
A |
17: 23,888,550 (GRCm39) |
D196V |
probably damaging |
Het |
Tpi1 |
A |
G |
6: 124,791,066 (GRCm39) |
F57S |
probably damaging |
Het |
Tril |
A |
G |
6: 53,794,793 (GRCm39) |
*810Q |
probably null |
Het |
Trrap |
T |
A |
5: 144,776,377 (GRCm39) |
V2972D |
possibly damaging |
Het |
Ttn |
A |
T |
2: 76,591,624 (GRCm39) |
V12688E |
probably damaging |
Het |
Ttn |
T |
C |
2: 76,551,283 (GRCm39) |
M31370V |
probably damaging |
Het |
Txndc11 |
A |
G |
16: 10,909,625 (GRCm39) |
F307S |
probably damaging |
Het |
Vmn1r40 |
C |
T |
6: 89,691,642 (GRCm39) |
S153L |
probably benign |
Het |
Vmn2r95 |
A |
G |
17: 18,672,005 (GRCm39) |
T581A |
possibly damaging |
Het |
Wdtc1 |
A |
G |
4: 133,024,811 (GRCm39) |
F462S |
probably damaging |
Het |
Zfp101 |
A |
G |
17: 33,601,295 (GRCm39) |
S154P |
possibly damaging |
Het |
Zmym6 |
A |
G |
4: 127,002,487 (GRCm39) |
N481D |
probably benign |
Het |
|
Other mutations in Crocc |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01389:Crocc
|
APN |
4 |
140,749,423 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01474:Crocc
|
APN |
4 |
140,762,703 (GRCm39) |
splice site |
probably benign |
|
IGL01859:Crocc
|
APN |
4 |
140,756,601 (GRCm39) |
missense |
probably benign |
0.07 |
IGL02161:Crocc
|
APN |
4 |
140,761,302 (GRCm39) |
missense |
probably benign |
0.01 |
IGL02244:Crocc
|
APN |
4 |
140,765,231 (GRCm39) |
missense |
probably benign |
0.00 |
IGL02970:Crocc
|
APN |
4 |
140,757,557 (GRCm39) |
missense |
possibly damaging |
0.49 |
N/A:Crocc
|
UTSW |
4 |
140,749,057 (GRCm39) |
missense |
probably damaging |
1.00 |
R0158:Crocc
|
UTSW |
4 |
140,769,553 (GRCm39) |
splice site |
probably benign |
|
R0280:Crocc
|
UTSW |
4 |
140,755,737 (GRCm39) |
missense |
probably damaging |
1.00 |
R0532:Crocc
|
UTSW |
4 |
140,757,558 (GRCm39) |
missense |
possibly damaging |
0.95 |
R0597:Crocc
|
UTSW |
4 |
140,744,382 (GRCm39) |
missense |
probably benign |
|
R0597:Crocc
|
UTSW |
4 |
140,747,224 (GRCm39) |
missense |
probably benign |
0.06 |
R0761:Crocc
|
UTSW |
4 |
140,774,387 (GRCm39) |
missense |
probably benign |
0.01 |
R0761:Crocc
|
UTSW |
4 |
140,757,087 (GRCm39) |
missense |
probably benign |
0.00 |
R1238:Crocc
|
UTSW |
4 |
140,762,675 (GRCm39) |
missense |
probably benign |
0.00 |
R1460:Crocc
|
UTSW |
4 |
140,756,551 (GRCm39) |
nonsense |
probably null |
|
R1515:Crocc
|
UTSW |
4 |
140,747,048 (GRCm39) |
missense |
probably benign |
0.00 |
R1557:Crocc
|
UTSW |
4 |
140,752,776 (GRCm39) |
missense |
probably damaging |
0.96 |
R1561:Crocc
|
UTSW |
4 |
140,757,579 (GRCm39) |
missense |
probably damaging |
1.00 |
R1641:Crocc
|
UTSW |
4 |
140,744,388 (GRCm39) |
missense |
probably benign |
0.00 |
R1709:Crocc
|
UTSW |
4 |
140,753,410 (GRCm39) |
critical splice donor site |
probably null |
|
R1785:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1786:Crocc
|
UTSW |
4 |
140,749,113 (GRCm39) |
missense |
probably damaging |
0.99 |
R1793:Crocc
|
UTSW |
4 |
140,746,620 (GRCm39) |
missense |
probably damaging |
1.00 |
R1897:Crocc
|
UTSW |
4 |
140,746,047 (GRCm39) |
missense |
probably damaging |
1.00 |
R1935:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R2037:Crocc
|
UTSW |
4 |
140,774,253 (GRCm39) |
critical splice donor site |
probably null |
|
R2127:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2129:Crocc
|
UTSW |
4 |
140,744,407 (GRCm39) |
missense |
probably damaging |
1.00 |
R2130:Crocc
|
UTSW |
4 |
140,756,413 (GRCm39) |
missense |
probably benign |
0.04 |
R2136:Crocc
|
UTSW |
4 |
140,760,265 (GRCm39) |
missense |
probably damaging |
1.00 |
R2298:Crocc
|
UTSW |
4 |
140,752,770 (GRCm39) |
missense |
probably benign |
0.30 |
R2847:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2848:Crocc
|
UTSW |
4 |
140,746,067 (GRCm39) |
missense |
probably damaging |
0.97 |
R2913:Crocc
|
UTSW |
4 |
140,747,661 (GRCm39) |
missense |
probably damaging |
1.00 |
R3415:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3416:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R3417:Crocc
|
UTSW |
4 |
140,773,758 (GRCm39) |
missense |
possibly damaging |
0.75 |
R4082:Crocc
|
UTSW |
4 |
140,761,282 (GRCm39) |
splice site |
probably null |
|
R4454:Crocc
|
UTSW |
4 |
140,747,716 (GRCm39) |
missense |
possibly damaging |
0.52 |
R4591:Crocc
|
UTSW |
4 |
140,745,983 (GRCm39) |
missense |
probably damaging |
1.00 |
R4597:Crocc
|
UTSW |
4 |
140,747,088 (GRCm39) |
missense |
probably damaging |
1.00 |
R4984:Crocc
|
UTSW |
4 |
140,761,763 (GRCm39) |
missense |
probably damaging |
1.00 |
R4992:Crocc
|
UTSW |
4 |
140,773,977 (GRCm39) |
missense |
probably damaging |
0.98 |
R5109:Crocc
|
UTSW |
4 |
140,755,722 (GRCm39) |
missense |
probably damaging |
1.00 |
R5143:Crocc
|
UTSW |
4 |
140,768,350 (GRCm39) |
missense |
probably benign |
0.01 |
R5381:Crocc
|
UTSW |
4 |
140,756,622 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5684:Crocc
|
UTSW |
4 |
140,778,455 (GRCm39) |
missense |
probably damaging |
0.99 |
R5757:Crocc
|
UTSW |
4 |
140,770,875 (GRCm39) |
missense |
probably damaging |
1.00 |
R5795:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5796:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5798:Crocc
|
UTSW |
4 |
140,769,118 (GRCm39) |
frame shift |
probably null |
|
R5815:Crocc
|
UTSW |
4 |
140,762,507 (GRCm39) |
missense |
probably damaging |
0.99 |
R5955:Crocc
|
UTSW |
4 |
140,745,229 (GRCm39) |
missense |
possibly damaging |
0.75 |
R6031:Crocc
|
UTSW |
4 |
140,761,668 (GRCm39) |
critical splice donor site |
probably null |
|
R6063:Crocc
|
UTSW |
4 |
140,773,851 (GRCm39) |
missense |
probably damaging |
1.00 |
R6063:Crocc
|
UTSW |
4 |
140,769,032 (GRCm39) |
missense |
probably benign |
0.08 |
R7086:Crocc
|
UTSW |
4 |
140,774,368 (GRCm39) |
missense |
possibly damaging |
0.47 |
R7282:Crocc
|
UTSW |
4 |
140,749,652 (GRCm39) |
missense |
probably damaging |
1.00 |
R7293:Crocc
|
UTSW |
4 |
140,770,867 (GRCm39) |
missense |
probably benign |
0.17 |
R7404:Crocc
|
UTSW |
4 |
140,753,497 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7571:Crocc
|
UTSW |
4 |
140,773,360 (GRCm39) |
critical splice acceptor site |
probably null |
|
R7646:Crocc
|
UTSW |
4 |
140,748,966 (GRCm39) |
missense |
probably null |
0.94 |
R7782:Crocc
|
UTSW |
4 |
140,752,597 (GRCm39) |
missense |
probably benign |
0.05 |
R8053:Crocc
|
UTSW |
4 |
140,770,230 (GRCm39) |
critical splice donor site |
probably null |
|
R8762:Crocc
|
UTSW |
4 |
140,761,369 (GRCm39) |
missense |
possibly damaging |
0.78 |
R9021:Crocc
|
UTSW |
4 |
140,749,674 (GRCm39) |
missense |
probably benign |
0.00 |
R9188:Crocc
|
UTSW |
4 |
140,747,151 (GRCm39) |
missense |
probably benign |
0.04 |
R9272:Crocc
|
UTSW |
4 |
140,747,132 (GRCm39) |
missense |
probably benign |
0.00 |
R9411:Crocc
|
UTSW |
4 |
140,749,577 (GRCm39) |
critical splice donor site |
probably null |
|
R9647:Crocc
|
UTSW |
4 |
140,774,335 (GRCm39) |
missense |
probably benign |
0.00 |
R9667:Crocc
|
UTSW |
4 |
140,748,988 (GRCm39) |
missense |
probably damaging |
1.00 |
R9706:Crocc
|
UTSW |
4 |
140,746,046 (GRCm39) |
missense |
possibly damaging |
0.76 |
R9780:Crocc
|
UTSW |
4 |
140,756,556 (GRCm39) |
missense |
probably benign |
0.01 |
X0065:Crocc
|
UTSW |
4 |
140,769,103 (GRCm39) |
missense |
possibly damaging |
0.57 |
|
Predicted Primers |
PCR Primer
(F):5'- TCAGTGCCATCACGGTTCTCACAG -3'
(R):5'- CACCAGGAAGGAGCGACTTCATAC -3'
Sequencing Primer
(F):5'- GGTTCTCACAGGGGCTAAG -3'
(R):5'- cctggctgtcctggaac -3'
|
Posted On |
2014-02-20 |