Incidental Mutation 'R2897:Chd5'
ID |
260836 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Chd5
|
Ensembl Gene |
ENSMUSG00000005045 |
Gene Name |
chromodomain helicase DNA binding protein 5 |
Synonyms |
B230399N07Rik, 4930532L22Rik |
MMRRC Submission |
040485-MU
|
Accession Numbers |
|
Essential gene? |
Non essential
(E-score: 0.000)
|
Stock # |
R2897 (G1)
|
Quality Score |
225 |
Status
|
Validated
|
Chromosome |
4 |
Chromosomal Location |
152423108-152474651 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 152456572 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Phenylalanine to Leucine
at position 970
(F970L)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000005175
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000005175]
[ENSMUST00000030775]
[ENSMUST00000164662]
|
AlphaFold |
A2A8L1 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000005175
AA Change: F970L
PolyPhen 2
Score 0.999 (Sensitivity: 0.14; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000005175 Gene: ENSMUSG00000005045 AA Change: F970L
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
2e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1729 |
1901 |
1.7e-99 |
PFAM |
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000030775
AA Change: F970L
PolyPhen 2
Score 0.972 (Sensitivity: 0.77; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000030775 Gene: ENSMUSG00000005045 AA Change: F970L
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
150 |
203 |
9e-28 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1297 |
1361 |
2.78e-33 |
SMART |
DUF1086
|
1374 |
1533 |
5.11e-105 |
SMART |
low complexity region
|
1552 |
1567 |
N/A |
INTRINSIC |
low complexity region
|
1685 |
1701 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1730 |
1901 |
2.8e-93 |
PFAM |
low complexity region
|
1922 |
1936 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000124423
|
Predicted Effect |
probably damaging
Transcript: ENSMUST00000164662
AA Change: F970L
PolyPhen 2
Score 0.994 (Sensitivity: 0.69; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000132600 Gene: ENSMUSG00000005045 AA Change: F970L
Domain | Start | End | E-Value | Type |
low complexity region
|
17 |
40 |
N/A |
INTRINSIC |
low complexity region
|
46 |
71 |
N/A |
INTRINSIC |
low complexity region
|
76 |
92 |
N/A |
INTRINSIC |
coiled coil region
|
96 |
126 |
N/A |
INTRINSIC |
Pfam:CHDNT
|
149 |
203 |
1.9e-32 |
PFAM |
low complexity region
|
209 |
220 |
N/A |
INTRINSIC |
low complexity region
|
256 |
273 |
N/A |
INTRINSIC |
low complexity region
|
291 |
304 |
N/A |
INTRINSIC |
low complexity region
|
323 |
333 |
N/A |
INTRINSIC |
PHD
|
347 |
390 |
1.09e-14 |
SMART |
RING
|
348 |
389 |
4.48e-1 |
SMART |
low complexity region
|
400 |
416 |
N/A |
INTRINSIC |
PHD
|
420 |
463 |
3.29e-14 |
SMART |
RING
|
421 |
462 |
4.15e0 |
SMART |
CHROMO
|
468 |
548 |
2.52e-13 |
SMART |
CHROMO
|
592 |
649 |
1.34e-8 |
SMART |
low complexity region
|
657 |
678 |
N/A |
INTRINSIC |
DEXDc
|
698 |
910 |
8.34e-33 |
SMART |
low complexity region
|
1023 |
1038 |
N/A |
INTRINSIC |
HELICc
|
1056 |
1140 |
4.02e-26 |
SMART |
DUF1087
|
1260 |
1324 |
2.78e-33 |
SMART |
DUF1086
|
1337 |
1496 |
5.11e-105 |
SMART |
low complexity region
|
1515 |
1530 |
N/A |
INTRINSIC |
low complexity region
|
1648 |
1664 |
N/A |
INTRINSIC |
Pfam:CHDCT2
|
1692 |
1864 |
1.7e-99 |
PFAM |
low complexity region
|
1885 |
1899 |
N/A |
INTRINSIC |
|
Meta Mutation Damage Score |
0.4945 |
Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.8%
|
Validation Efficiency |
99% (72/73) |
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the chromodomain helicase DNA-binding protein family. Members of this family are characterized by a chromodomain, a helicase ATP-binding domain and an additional functional domain. This gene encodes a neuron-specific protein that may function in chromatin remodeling and gene transcription. This gene is a potential tumor suppressor gene that may play a role in the development of neuroblastoma. [provided by RefSeq, Feb 2012] PHENOTYPE: Mice homozygous for a knock-out allele exhibit male infertility with abnormal spermiogenesis and chromatin condensation. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 72 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2210408I21Rik |
T |
C |
13: 77,471,640 (GRCm39) |
V1015A |
probably benign |
Het |
4930480E11Rik |
C |
T |
X: 77,413,868 (GRCm39) |
Q198* |
probably null |
Het |
Acap3 |
G |
C |
4: 155,989,388 (GRCm39) |
|
probably null |
Het |
Adamts14 |
T |
C |
10: 61,040,689 (GRCm39) |
D879G |
probably damaging |
Het |
Akap1 |
A |
T |
11: 88,735,605 (GRCm39) |
C352* |
probably null |
Het |
Ankk1 |
T |
A |
9: 49,333,122 (GRCm39) |
T121S |
probably benign |
Het |
Ankrd6 |
T |
C |
4: 32,860,438 (GRCm39) |
S2G |
probably damaging |
Het |
Anks1 |
G |
T |
17: 28,204,337 (GRCm39) |
|
probably null |
Het |
Apob |
G |
A |
12: 8,060,356 (GRCm39) |
G2946D |
probably damaging |
Het |
Atm |
A |
C |
9: 53,419,105 (GRCm39) |
C782W |
probably damaging |
Het |
Atp1a4 |
A |
T |
1: 172,074,257 (GRCm39) |
I332N |
probably damaging |
Het |
Bnc2 |
T |
C |
4: 84,211,152 (GRCm39) |
I406V |
probably damaging |
Het |
Cdh20 |
A |
T |
1: 104,875,199 (GRCm39) |
D327V |
probably damaging |
Het |
Cep192 |
T |
A |
18: 67,988,341 (GRCm39) |
|
probably null |
Het |
Coq9 |
T |
C |
8: 95,579,752 (GRCm39) |
Y236H |
probably damaging |
Het |
Csn1s2a |
A |
G |
5: 87,929,680 (GRCm39) |
H93R |
unknown |
Het |
Cxcr2 |
T |
C |
1: 74,198,130 (GRCm39) |
V208A |
probably benign |
Het |
Cyp1b1 |
G |
A |
17: 80,021,160 (GRCm39) |
T194M |
probably benign |
Het |
Dbt |
T |
A |
3: 116,317,061 (GRCm39) |
V79E |
probably damaging |
Het |
Dcx |
A |
G |
X: 142,706,428 (GRCm39) |
|
probably benign |
Het |
Dnm3 |
G |
A |
1: 162,113,643 (GRCm39) |
|
probably benign |
Het |
Erbin |
C |
T |
13: 104,022,705 (GRCm39) |
E45K |
probably damaging |
Het |
Fastkd1 |
A |
G |
2: 69,532,960 (GRCm39) |
L469P |
probably damaging |
Het |
Gkn3 |
C |
T |
6: 87,360,507 (GRCm39) |
A163T |
probably damaging |
Het |
Gm10271 |
A |
G |
10: 116,808,495 (GRCm39) |
L7S |
probably damaging |
Het |
Gm5087 |
T |
C |
14: 13,158,805 (GRCm38) |
|
noncoding transcript |
Het |
Hid1 |
A |
G |
11: 115,241,356 (GRCm39) |
S645P |
probably benign |
Het |
Hmcn1 |
C |
T |
1: 150,678,624 (GRCm39) |
C499Y |
probably damaging |
Het |
Ifna1 |
C |
A |
4: 88,768,450 (GRCm39) |
Q43K |
probably benign |
Het |
Ikbkb |
G |
T |
8: 23,159,693 (GRCm39) |
Q432K |
possibly damaging |
Het |
Inpp4a |
A |
T |
1: 37,405,675 (GRCm39) |
H148L |
probably benign |
Het |
Itpr2 |
C |
T |
6: 146,074,839 (GRCm39) |
R2338Q |
probably benign |
Het |
Itpr2 |
A |
T |
6: 146,224,667 (GRCm39) |
I1441N |
probably damaging |
Het |
Krt78 |
T |
C |
15: 101,855,541 (GRCm39) |
R757G |
probably benign |
Het |
Lmx1a |
T |
A |
1: 167,658,109 (GRCm39) |
|
probably benign |
Het |
Lpxn |
T |
A |
19: 12,796,722 (GRCm39) |
S81T |
probably benign |
Het |
Lrriq1 |
T |
C |
10: 103,063,111 (GRCm39) |
N65S |
probably damaging |
Het |
Mis18bp1 |
T |
C |
12: 65,180,360 (GRCm39) |
D981G |
probably benign |
Het |
Mpp4 |
T |
C |
1: 59,183,853 (GRCm39) |
I296V |
probably benign |
Het |
Mtrf1l |
T |
C |
10: 5,767,565 (GRCm39) |
R184G |
probably benign |
Het |
Muc19 |
T |
C |
15: 91,822,550 (GRCm39) |
|
noncoding transcript |
Het |
Myo6 |
T |
A |
9: 80,176,893 (GRCm39) |
|
probably null |
Het |
Myom1 |
A |
G |
17: 71,408,215 (GRCm39) |
|
probably benign |
Het |
Ndrg4 |
A |
G |
8: 96,405,014 (GRCm39) |
|
probably null |
Het |
Neu2 |
A |
G |
1: 87,522,782 (GRCm39) |
S72G |
probably benign |
Het |
Nlrc4 |
T |
A |
17: 74,755,040 (GRCm39) |
M59L |
probably benign |
Het |
Nuak2 |
A |
T |
1: 132,252,791 (GRCm39) |
H115L |
probably damaging |
Het |
Oog1 |
T |
A |
12: 87,655,178 (GRCm39) |
I272K |
probably damaging |
Het |
Or10aa1 |
T |
C |
1: 173,869,699 (GRCm39) |
F61S |
probably damaging |
Het |
Or52a20 |
A |
T |
7: 103,366,749 (GRCm39) |
Y316F |
probably benign |
Het |
Pcdhb1 |
A |
G |
18: 37,399,516 (GRCm39) |
Y489C |
probably damaging |
Het |
Pde5a |
T |
C |
3: 122,572,651 (GRCm39) |
I344T |
probably benign |
Het |
Pip5kl1 |
C |
A |
2: 32,473,359 (GRCm39) |
A332D |
probably benign |
Het |
Pja1 |
T |
C |
X: 98,510,754 (GRCm39) |
E385G |
probably benign |
Het |
Psma6 |
A |
T |
12: 55,454,829 (GRCm39) |
I53L |
probably benign |
Het |
Ric8b |
T |
G |
10: 84,783,761 (GRCm39) |
D206E |
probably benign |
Het |
Sardh |
T |
C |
2: 27,079,559 (GRCm39) |
D911G |
probably benign |
Het |
Serpinb8 |
A |
G |
1: 107,534,776 (GRCm39) |
T32A |
unknown |
Het |
Shroom2 |
G |
T |
X: 151,443,035 (GRCm39) |
T710K |
probably benign |
Het |
Shroom3 |
G |
T |
5: 93,090,945 (GRCm39) |
V1151F |
probably damaging |
Het |
Slc38a7 |
A |
G |
8: 96,572,424 (GRCm39) |
|
probably benign |
Het |
Stk36 |
T |
A |
1: 74,671,984 (GRCm39) |
S895T |
probably null |
Het |
Sycp3 |
G |
A |
10: 88,308,544 (GRCm39) |
E205K |
possibly damaging |
Het |
Tbc1d16 |
A |
T |
11: 119,048,654 (GRCm39) |
I333N |
probably damaging |
Het |
Tectb |
C |
G |
19: 55,169,431 (GRCm39) |
|
probably benign |
Het |
Tmeff1 |
T |
A |
4: 48,658,831 (GRCm39) |
Y101* |
probably null |
Het |
Tns2 |
C |
T |
15: 102,017,369 (GRCm39) |
R281C |
probably damaging |
Het |
Ttn |
T |
A |
2: 76,549,500 (GRCm39) |
T23399S |
probably damaging |
Het |
Vipas39 |
A |
G |
12: 87,289,297 (GRCm39) |
V389A |
possibly damaging |
Het |
Vps41 |
T |
C |
13: 18,994,598 (GRCm39) |
|
probably benign |
Het |
Zfp329 |
A |
T |
7: 12,544,413 (GRCm39) |
H370Q |
probably damaging |
Het |
Zfp37 |
C |
T |
4: 62,110,014 (GRCm39) |
G350D |
probably damaging |
Het |
|
Other mutations in Chd5 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00537:Chd5
|
APN |
4 |
152,445,059 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL00886:Chd5
|
APN |
4 |
152,444,156 (GRCm39) |
missense |
probably benign |
0.00 |
IGL00963:Chd5
|
APN |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01399:Chd5
|
APN |
4 |
152,441,144 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01571:Chd5
|
APN |
4 |
152,468,572 (GRCm39) |
splice site |
probably benign |
|
IGL01606:Chd5
|
APN |
4 |
152,445,432 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL01636:Chd5
|
APN |
4 |
152,469,110 (GRCm39) |
nonsense |
probably null |
|
IGL02009:Chd5
|
APN |
4 |
152,450,670 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02417:Chd5
|
APN |
4 |
152,451,751 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL02504:Chd5
|
APN |
4 |
152,447,779 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02508:Chd5
|
APN |
4 |
152,447,481 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02597:Chd5
|
APN |
4 |
152,456,169 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02608:Chd5
|
APN |
4 |
152,440,564 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02612:Chd5
|
APN |
4 |
152,445,033 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02658:Chd5
|
APN |
4 |
152,445,050 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02662:Chd5
|
APN |
4 |
152,456,588 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02676:Chd5
|
APN |
4 |
152,440,530 (GRCm39) |
splice site |
probably benign |
|
IGL02871:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02942:Chd5
|
APN |
4 |
152,470,182 (GRCm39) |
missense |
probably damaging |
0.98 |
IGL02956:Chd5
|
APN |
4 |
152,464,413 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03286:Chd5
|
APN |
4 |
152,469,952 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03348:Chd5
|
APN |
4 |
152,461,142 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03398:Chd5
|
APN |
4 |
152,461,539 (GRCm39) |
missense |
probably damaging |
0.97 |
PIT1430001:Chd5
|
UTSW |
4 |
152,455,094 (GRCm39) |
missense |
probably damaging |
1.00 |
PIT4151001:Chd5
|
UTSW |
4 |
152,462,986 (GRCm39) |
missense |
probably damaging |
0.99 |
R0079:Chd5
|
UTSW |
4 |
152,470,206 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0241:Chd5
|
UTSW |
4 |
152,450,589 (GRCm39) |
missense |
probably damaging |
1.00 |
R0379:Chd5
|
UTSW |
4 |
152,467,778 (GRCm39) |
missense |
probably benign |
0.00 |
R0388:Chd5
|
UTSW |
4 |
152,456,101 (GRCm39) |
missense |
probably damaging |
1.00 |
R0675:Chd5
|
UTSW |
4 |
152,470,407 (GRCm39) |
missense |
probably benign |
0.06 |
R0730:Chd5
|
UTSW |
4 |
152,432,441 (GRCm39) |
missense |
possibly damaging |
0.72 |
R0799:Chd5
|
UTSW |
4 |
152,468,616 (GRCm39) |
missense |
probably damaging |
1.00 |
R0800:Chd5
|
UTSW |
4 |
152,440,614 (GRCm39) |
missense |
probably damaging |
1.00 |
R1276:Chd5
|
UTSW |
4 |
152,463,191 (GRCm39) |
missense |
probably damaging |
1.00 |
R1752:Chd5
|
UTSW |
4 |
152,459,590 (GRCm39) |
missense |
probably damaging |
1.00 |
R1753:Chd5
|
UTSW |
4 |
152,463,272 (GRCm39) |
missense |
probably damaging |
1.00 |
R1843:Chd5
|
UTSW |
4 |
152,470,263 (GRCm39) |
missense |
probably damaging |
1.00 |
R1850:Chd5
|
UTSW |
4 |
152,454,990 (GRCm39) |
missense |
probably damaging |
1.00 |
R1851:Chd5
|
UTSW |
4 |
152,462,727 (GRCm39) |
missense |
probably damaging |
0.97 |
R1859:Chd5
|
UTSW |
4 |
152,464,980 (GRCm39) |
missense |
probably benign |
0.00 |
R1983:Chd5
|
UTSW |
4 |
152,469,123 (GRCm39) |
missense |
possibly damaging |
0.89 |
R2404:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
1.00 |
R2898:Chd5
|
UTSW |
4 |
152,456,572 (GRCm39) |
missense |
probably damaging |
1.00 |
R3893:Chd5
|
UTSW |
4 |
152,445,113 (GRCm39) |
missense |
probably damaging |
1.00 |
R3938:Chd5
|
UTSW |
4 |
152,461,512 (GRCm39) |
missense |
probably benign |
0.05 |
R4707:Chd5
|
UTSW |
4 |
152,445,039 (GRCm39) |
missense |
probably damaging |
1.00 |
R4754:Chd5
|
UTSW |
4 |
152,462,203 (GRCm39) |
missense |
probably damaging |
0.99 |
R4911:Chd5
|
UTSW |
4 |
152,445,129 (GRCm39) |
missense |
probably damaging |
1.00 |
R4924:Chd5
|
UTSW |
4 |
152,450,886 (GRCm39) |
missense |
possibly damaging |
0.50 |
R4926:Chd5
|
UTSW |
4 |
152,467,768 (GRCm39) |
missense |
probably benign |
0.00 |
R5256:Chd5
|
UTSW |
4 |
152,456,554 (GRCm39) |
missense |
probably benign |
0.01 |
R5524:Chd5
|
UTSW |
4 |
152,461,087 (GRCm39) |
missense |
probably benign |
|
R5552:Chd5
|
UTSW |
4 |
152,470,272 (GRCm39) |
missense |
possibly damaging |
0.95 |
R5895:Chd5
|
UTSW |
4 |
152,464,389 (GRCm39) |
missense |
probably benign |
0.13 |
R5945:Chd5
|
UTSW |
4 |
152,464,408 (GRCm39) |
missense |
probably benign |
|
R6007:Chd5
|
UTSW |
4 |
152,463,878 (GRCm39) |
missense |
probably null |
1.00 |
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6039:Chd5
|
UTSW |
4 |
152,438,078 (GRCm39) |
small deletion |
probably benign |
|
R6172:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6173:Chd5
|
UTSW |
4 |
152,463,848 (GRCm39) |
missense |
probably damaging |
1.00 |
R6323:Chd5
|
UTSW |
4 |
152,451,791 (GRCm39) |
missense |
probably damaging |
0.99 |
R6331:Chd5
|
UTSW |
4 |
152,466,865 (GRCm39) |
missense |
probably benign |
0.02 |
R6495:Chd5
|
UTSW |
4 |
152,451,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R6528:Chd5
|
UTSW |
4 |
152,441,133 (GRCm39) |
missense |
probably damaging |
1.00 |
R6849:Chd5
|
UTSW |
4 |
152,462,995 (GRCm39) |
missense |
probably damaging |
1.00 |
R6854:Chd5
|
UTSW |
4 |
152,467,395 (GRCm39) |
missense |
probably damaging |
1.00 |
R6859:Chd5
|
UTSW |
4 |
152,462,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R6999:Chd5
|
UTSW |
4 |
152,458,891 (GRCm39) |
missense |
probably damaging |
1.00 |
R7034:Chd5
|
UTSW |
4 |
152,445,398 (GRCm39) |
missense |
possibly damaging |
0.89 |
R7110:Chd5
|
UTSW |
4 |
152,469,896 (GRCm39) |
missense |
probably damaging |
1.00 |
R7361:Chd5
|
UTSW |
4 |
152,447,745 (GRCm39) |
missense |
probably damaging |
0.99 |
R7397:Chd5
|
UTSW |
4 |
152,452,469 (GRCm39) |
missense |
possibly damaging |
0.82 |
R7440:Chd5
|
UTSW |
4 |
152,469,108 (GRCm39) |
missense |
probably benign |
0.01 |
R7489:Chd5
|
UTSW |
4 |
152,457,925 (GRCm39) |
missense |
probably damaging |
1.00 |
R7810:Chd5
|
UTSW |
4 |
152,443,032 (GRCm39) |
missense |
probably damaging |
0.97 |
R8057:Chd5
|
UTSW |
4 |
152,450,829 (GRCm39) |
missense |
probably damaging |
1.00 |
R8078:Chd5
|
UTSW |
4 |
152,445,448 (GRCm39) |
missense |
possibly damaging |
0.90 |
R8092:Chd5
|
UTSW |
4 |
152,463,261 (GRCm39) |
missense |
probably damaging |
0.99 |
R8170:Chd5
|
UTSW |
4 |
152,461,040 (GRCm39) |
missense |
probably benign |
0.26 |
R8255:Chd5
|
UTSW |
4 |
152,463,880 (GRCm39) |
missense |
probably damaging |
0.99 |
R8348:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8448:Chd5
|
UTSW |
4 |
152,445,173 (GRCm39) |
missense |
probably damaging |
0.98 |
R8478:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8482:Chd5
|
UTSW |
4 |
152,441,147 (GRCm39) |
nonsense |
probably null |
|
R8670:Chd5
|
UTSW |
4 |
152,469,953 (GRCm39) |
missense |
possibly damaging |
0.81 |
R8733:Chd5
|
UTSW |
4 |
152,463,923 (GRCm39) |
missense |
probably damaging |
1.00 |
R8743:Chd5
|
UTSW |
4 |
152,450,862 (GRCm39) |
missense |
probably benign |
0.03 |
R8941:Chd5
|
UTSW |
4 |
152,463,305 (GRCm39) |
missense |
possibly damaging |
0.82 |
R8961:Chd5
|
UTSW |
4 |
152,467,489 (GRCm39) |
splice site |
probably benign |
|
R9103:Chd5
|
UTSW |
4 |
152,461,444 (GRCm39) |
missense |
possibly damaging |
0.62 |
R9160:Chd5
|
UTSW |
4 |
152,469,916 (GRCm39) |
missense |
probably damaging |
0.99 |
R9221:Chd5
|
UTSW |
4 |
152,456,122 (GRCm39) |
missense |
probably damaging |
0.96 |
R9399:Chd5
|
UTSW |
4 |
152,468,592 (GRCm39) |
missense |
probably benign |
0.06 |
R9429:Chd5
|
UTSW |
4 |
152,447,364 (GRCm39) |
missense |
probably damaging |
0.99 |
R9635:Chd5
|
UTSW |
4 |
152,461,079 (GRCm39) |
missense |
possibly damaging |
0.87 |
R9783:Chd5
|
UTSW |
4 |
152,458,865 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1176:Chd5
|
UTSW |
4 |
152,462,936 (GRCm39) |
missense |
probably damaging |
0.98 |
|
Predicted Primers |
PCR Primer
(F):5'- TCCATCAATTGCAGTGACTACG -3'
(R):5'- CATAGGGACCCACCAAGATG -3'
Sequencing Primer
(F):5'- CAGGCTGCCTCAGTTGTAG -3'
(R):5'- GATGGCCACAGGGAATCCAC -3'
|
Posted On |
2015-01-23 |