Mutagenetix > Incidental Mutation

Incidental Mutation 'R0625:Ctrc'

57408

Institutional Source

Beutler Lab

Gene Symbol

Ctrc

Ensembl Gene

ENSMUSG00000062478

Gene Name

chymotrypsin C

Synonyms

caldecrin, 1810044E12Rik

MMRRC Submission

038814-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.083) question?

Stock #

R0625 (G1)

Quality Score

179

Status

Not validated

Chromosome

Chromosomal Location

141565550-141573598 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 141568829 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Alanine at position 125 (T125A)

Ref Sequence

ENSEMBL: ENSMUSP00000101407 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037059] [ENSMUST00000105781]

AlphaFold

no structure available at present

Predicted Effect

probably damaging
Transcript: ENSMUST00000037059
AA Change: T157A

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000039879
Gene: ENSMUSG00000062478
AA Change: T157A

Domain	Start	End	E-Value	Type
signal peptide	1	16	N/A	INTRINSIC
Tryp_SPc	29	261	4.88e-87	SMART

Predicted Effect

probably damaging
Transcript: ENSMUST00000105781
AA Change: T125A

PolyPhen 2 Score 0.997 (Sensitivity: 0.41; Specificity: 0.98)

SMART Domains

Protein: ENSMUSP00000101407
Gene: ENSMUSG00000062478
AA Change: T125A

Domain	Start	End	E-Value	Type
signal peptide	1	16	N/A	INTRINSIC
Tryp_SPc	29	229	9.66e-59	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000128368

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000136064

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000153282

Predicted Effect

probably benign
Transcript: ENSMUST00000176781

Coding Region Coverage

1x: 99.4%
3x: 98.9%
10x: 97.5%
20x: 95.2%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the peptidase S1 family. The encoded protein is a serum calcium-decreasing factor that has chymotrypsin-like protease activity. Alternatively spliced transcript variants have been observed, but their full-length nature has not been determined. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930550C14Rik	T	C	9: 53,319,365 (GRCm39)	S2P	probably benign	Het
Abca16	A	C	7: 120,035,116 (GRCm39)	T301P	probably damaging	Het
Acer2	A	G	4: 86,805,399 (GRCm39)	D121G	possibly damaging	Het
Adgrd1	T	C	5: 129,248,995 (GRCm39)		probably null	Het
Arhgap11a	T	C	2: 113,672,056 (GRCm39)	I249V	probably benign	Het
Arhgap22	A	G	14: 33,088,671 (GRCm39)	E219G	probably benign	Het
C2cd4b	T	A	9: 67,667,033 (GRCm39)	S10T	probably benign	Het
Cnot6	A	T	11: 49,573,998 (GRCm39)	I224N	probably damaging	Het
Cxxc5	T	G	18: 35,991,642 (GRCm39)	S14R	unknown	Het
Cyp4f37	T	G	17: 32,853,652 (GRCm39)	F445L	probably damaging	Het
Dcbld1	T	G	10: 52,188,946 (GRCm39)	I186S	probably benign	Het
Dmxl2	T	C	9: 54,289,986 (GRCm39)	T2510A	probably benign	Het
Dnah3	A	G	7: 119,671,110 (GRCm39)	I591T	possibly damaging	Het
Dock5	A	T	14: 68,078,612 (GRCm39)	I204N	probably benign	Het
Dysf	G	A	6: 84,088,969 (GRCm39)		probably null	Het
Erich5	A	G	15: 34,471,515 (GRCm39)	E248G	probably damaging	Het
Fhip1a	A	G	3: 85,637,807 (GRCm39)	V164A	possibly damaging	Het
Foxm1	A	G	6: 128,350,834 (GRCm39)	S712G	probably damaging	Het
Frmpd1	A	G	4: 45,284,055 (GRCm39)	T959A	probably benign	Het
Gfra4	C	T	2: 130,882,176 (GRCm39)	V277I	probably null	Het
Hacd4	T	C	4: 88,353,247 (GRCm39)	I82V	probably benign	Het
Itih2	C	T	2: 10,128,225 (GRCm39)	V159I	possibly damaging	Het
Itpr2	T	A	6: 146,068,149 (GRCm39)	M2410L	probably benign	Het
Marchf11	A	G	15: 26,311,129 (GRCm39)	I202V	probably damaging	Het
Marchf3	A	G	18: 56,944,902 (GRCm39)		probably null	Het
Med12l	G	A	3: 59,154,858 (GRCm39)	E1135K	probably damaging	Het
Mib2	C	T	4: 155,743,917 (GRCm39)	G42S	probably damaging	Het
Mlx	T	C	11: 100,978,608 (GRCm39)	L78P	possibly damaging	Het
Muc5b	T	C	7: 141,400,164 (GRCm39)	C473R	unknown	Het
N4bp2l1	T	A	5: 150,500,210 (GRCm39)	R66*	probably null	Het
Nes	A	G	3: 87,884,479 (GRCm39)	T913A	possibly damaging	Het
Oas1a	T	C	5: 121,037,322 (GRCm39)	E235G	probably damaging	Het
Or5p56	T	C	7: 107,590,396 (GRCm39)	S275P	probably damaging	Het
Or8b1c	T	C	9: 38,384,504 (GRCm39)	S154P	possibly damaging	Het
Or8i2	T	A	2: 86,851,964 (GRCm39)	H308L	probably benign	Het
Parn	C	T	16: 13,458,158 (GRCm39)	V286I	probably benign	Het
Paxip1	G	A	5: 27,970,940 (GRCm39)	Q470*	probably null	Het
Phc2	C	G	4: 128,617,503 (GRCm39)	H510D	possibly damaging	Het
Pla2g4f	T	A	2: 120,135,522 (GRCm39)	D384V	probably damaging	Het
Plpbp	A	T	8: 27,535,159 (GRCm39)	N68I	probably damaging	Het
Podxl2	G	A	6: 88,826,937 (GRCm39)	A123V	possibly damaging	Het
Pole	A	T	5: 110,473,416 (GRCm39)	T1737S	possibly damaging	Het
Ppp3cc	T	C	14: 70,462,476 (GRCm39)	E396G	probably damaging	Het
Pramel7	T	A	2: 87,321,352 (GRCm39)	I228F	probably benign	Het
Prl7d1	A	T	13: 27,894,123 (GRCm39)	C149S	probably benign	Het
Qtrt1	G	T	9: 21,329,584 (GRCm39)	M217I	probably benign	Het
Sec24a	T	A	11: 51,620,281 (GRCm39)	D456V	probably damaging	Het
Shox2	T	G	3: 66,888,877 (GRCm39)		probably null	Het
Skint2	T	A	4: 112,481,283 (GRCm39)	S49T	probably damaging	Het
Smarca5	A	G	8: 81,447,315 (GRCm39)		probably null	Het
Sorcs2	T	A	5: 36,181,916 (GRCm39)	D1068V	possibly damaging	Het
Tmem114	T	C	16: 8,229,966 (GRCm39)		probably null	Het
Ttc7b	T	A	12: 100,321,305 (GRCm39)	M24L	probably benign	Het
Ttll3	A	G	6: 113,385,864 (GRCm39)		probably null	Het
Usp7	C	T	16: 8,522,846 (GRCm39)	D102N	probably benign	Het

Other mutations in Ctrc

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01137:Ctrc	APN	4	141,566,065 (GRCm39)	missense	possibly damaging	0.84
IGL01727:Ctrc	APN	4	141,571,072 (GRCm39)	missense	probably damaging	1.00
IGL02085:Ctrc	APN	4	141,571,025 (GRCm39)	missense	possibly damaging	0.79
IGL02413:Ctrc	APN	4	141,571,028 (GRCm39)	missense	possibly damaging	0.87
IGL02945:Ctrc	APN	4	141,573,563 (GRCm39)	missense	possibly damaging	0.93
R1458:Ctrc	UTSW	4	141,573,535 (GRCm39)	splice site	probably null
R1460:Ctrc	UTSW	4	141,566,120 (GRCm39)	intron	probably benign
R3937:Ctrc	UTSW	4	141,567,632 (GRCm39)	missense	probably damaging	1.00
R4724:Ctrc	UTSW	4	141,573,607 (GRCm39)	splice site	probably null
R4750:Ctrc	UTSW	4	141,568,834 (GRCm39)	missense	probably benign	0.38
R5207:Ctrc	UTSW	4	141,567,695 (GRCm39)	missense	probably damaging	0.97
R5326:Ctrc	UTSW	4	141,571,037 (GRCm39)	missense	probably damaging	0.96
R5542:Ctrc	UTSW	4	141,571,037 (GRCm39)	missense	probably damaging	0.96
R5641:Ctrc	UTSW	4	141,566,094 (GRCm39)	missense	probably damaging	0.97
R5872:Ctrc	UTSW	4	141,572,354 (GRCm39)	missense	probably damaging	1.00
R6932:Ctrc	UTSW	4	141,568,879 (GRCm39)	missense	probably damaging	1.00
R7329:Ctrc	UTSW	4	141,571,022 (GRCm39)	missense	probably benign	0.17
R7485:Ctrc	UTSW	4	141,567,627 (GRCm39)	missense	probably damaging	1.00
R8001:Ctrc	UTSW	4	141,567,671 (GRCm39)	missense	probably damaging	1.00
R8117:Ctrc	UTSW	4	141,565,972 (GRCm39)	missense	probably damaging	1.00
R9644:Ctrc	UTSW	4	141,572,336 (GRCm39)	missense	probably damaging	1.00
T0722:Ctrc	UTSW	4	141,572,507 (GRCm39)	frame shift	probably null
T0975:Ctrc	UTSW	4	141,572,507 (GRCm39)	frame shift	probably null

Predicted Primers

PCR Primer
(F):5'- AATCCTTGTGTCAGCCGTCACC -3'
(R):5'- GAGCCATTTGTCATCCAGAGTCCC -3'

Sequencing Primer
(F):5'- ACCTTCACTTGTGACATGCTTG -3'
(R):5'- CAGCTTTGTTACCTAGCTGC -3'

Posted On

2013-07-11