Mutagenetix > Incidental Mutation

Incidental Mutation 'R0487:Rnf145'

42353

Institutional Source

Beutler Lab

Gene Symbol

Rnf145

Ensembl Gene

ENSMUSG00000019189

Gene Name

ring finger protein 145

Synonyms

3732413I11Rik

MMRRC Submission

038686-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.206) question?

Stock #

R0487 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

44409791-44456347 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 44446056 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Phenylalanine to Leucine at position 297 (F297L)

Ref Sequence

ENSEMBL: ENSMUSP00000019333 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000019333] [ENSMUST00000101327]

AlphaFold

Q5SWK7

Predicted Effect

probably benign
Transcript: ENSMUST00000019333
AA Change: F297L

PolyPhen 2 Score 0.214 (Sensitivity: 0.92; Specificity: 0.88)

SMART Domains

Protein: ENSMUSP00000019333
Gene: ENSMUSG00000019189
AA Change: F297L

Domain	Start	End	E-Value	Type
Pfam:TRC8_N	8	506	2.8e-156	PFAM
RING	537	574	2.12e-8	SMART
low complexity region	590	601	N/A	INTRINSIC

Predicted Effect

probably benign
Transcript: ENSMUST00000101327

SMART Domains

Protein: ENSMUSP00000098881
Gene: ENSMUSG00000019189

Domain	Start	End	E-Value	Type
Pfam:TRC8_N	7	266	1.2e-70	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000129676

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000150257

Coding Region Coverage

1x: 99.1%
3x: 98.2%
10x: 95.9%
20x: 91.6%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	A	T	11: 9,281,687 (GRCm39)	M3190L	probably benign	Het
Adgrv1	A	T	13: 81,637,154 (GRCm39)	L3429H	probably damaging	Het
Ahnak	A	G	19: 8,991,484 (GRCm39)	D4256G	probably damaging	Het
Ahnak	A	G	19: 8,984,515 (GRCm39)	N1933S	probably benign	Het
Amacr	A	G	15: 10,984,835 (GRCm39)	D151G	probably benign	Het
Ano9	A	T	7: 140,687,762 (GRCm39)	H255Q	possibly damaging	Het
Asphd2	A	T	5: 112,539,501 (GRCm39)	Y111N	possibly damaging	Het
Cage1	T	A	13: 38,209,334 (GRCm39)	K214N	probably benign	Het
Cdkn2c	A	G	4: 109,518,606 (GRCm39)	L116P	probably damaging	Het
Cltc	C	T	11: 86,624,490 (GRCm39)	R148H	probably damaging	Het
Cmbl	A	G	15: 31,582,176 (GRCm39)	N58D	probably damaging	Het
Cpa6	T	C	1: 10,479,487 (GRCm39)	T249A	possibly damaging	Het
Cpsf1	T	A	15: 76,481,202 (GRCm39)	N1218I	probably damaging	Het
Csf2rb	T	C	15: 78,232,531 (GRCm39)	S613P	probably benign	Het
Ctnnd1	A	G	2: 84,439,411 (GRCm39)	S761P	probably damaging	Het
Cxcr6	A	C	9: 123,639,463 (GRCm39)	I155L	probably benign	Het
Ecpas	A	G	4: 58,819,155 (GRCm39)	V1265A	probably damaging	Het
Fam216a	A	G	5: 122,508,576 (GRCm39)		probably null	Het
Fgf10	T	A	13: 118,918,147 (GRCm39)		probably null	Het
Fgf17	T	C	14: 70,875,996 (GRCm39)	T79A	probably damaging	Het
G3bp1	T	C	11: 55,389,452 (GRCm39)	F383L	probably damaging	Het
Gm1527	G	T	3: 28,980,828 (GRCm39)	V643L	probably benign	Het
Hmcn2	A	T	2: 31,276,689 (GRCm39)	Q1556L	possibly damaging	Het
Hspa4l	C	T	3: 40,738,758 (GRCm39)	T616I	possibly damaging	Het
Irag2	A	G	6: 145,110,986 (GRCm39)	S264G	probably benign	Het
Irgm1	T	C	11: 48,757,154 (GRCm39)	D219G	probably damaging	Het
Jcad	A	G	18: 4,673,243 (GRCm39)	D335G	probably damaging	Het
Kcnh4	A	G	11: 100,641,084 (GRCm39)	F455S	probably damaging	Het
Khdrbs3	T	C	15: 68,889,210 (GRCm39)	Y120H	probably damaging	Het
Kndc1	A	T	7: 139,493,939 (GRCm39)	T507S	probably null	Het
Lepr	G	T	4: 101,625,290 (GRCm39)	E482*	probably null	Het
Mcemp1	T	A	8: 3,717,507 (GRCm39)	M146K	probably benign	Het
Mllt10	A	G	2: 18,211,948 (GRCm39)	T411A	probably damaging	Het
Myh8	A	T	11: 67,192,837 (GRCm39)	I1543L	probably benign	Het
Myo1f	T	C	17: 33,797,258 (GRCm39)	S147P	probably damaging	Het
Myrf	G	C	19: 10,195,526 (GRCm39)	T428S	probably benign	Het
Or5j1	C	T	2: 86,878,837 (GRCm39)	V248I	probably damaging	Het
Plaat1	G	A	16: 29,039,331 (GRCm39)		probably null	Het
Plch2	G	A	4: 155,093,469 (GRCm39)	R57C	probably damaging	Het
Rbm20	G	A	19: 53,839,626 (GRCm39)	G872R	probably damaging	Het
Retsat	A	T	6: 72,583,414 (GRCm39)	I373F	probably damaging	Het
Ros1	A	T	10: 52,031,204 (GRCm39)	M479K	possibly damaging	Het
Rubcnl	T	A	14: 75,273,521 (GRCm39)	N244K	probably benign	Het
Samhd1	A	G	2: 156,952,535 (GRCm39)	F406L	probably damaging	Het
Sdsl	A	T	5: 120,597,533 (GRCm39)	V258D	probably damaging	Het
Sec24c	C	G	14: 20,733,467 (GRCm39)	P166A	probably benign	Het
Sele	C	A	1: 163,881,184 (GRCm39)	Y461*	probably null	Het
Slc22a1	G	T	17: 12,881,487 (GRCm39)	S334*	probably null	Het
Spem1	T	G	11: 69,712,691 (GRCm39)		probably null	Het
Stat3	T	C	11: 100,794,469 (GRCm39)	E280G	probably damaging	Het
Stxbp4	T	C	11: 90,483,186 (GRCm39)	H280R	probably benign	Het
Tas2r129	G	A	6: 132,928,906 (GRCm39)	C281Y	probably benign	Het
Tas2r129	T	G	6: 132,928,907 (GRCm39)	C281W	probably benign	Het
Tcp11	T	A	17: 28,298,897 (GRCm39)		probably null	Het
Tnrc6b	G	A	15: 80,764,876 (GRCm39)	V793M	probably benign	Het
Vmn2r59	A	C	7: 41,696,528 (GRCm39)	Y71*	probably null	Het
Wdr35	T	C	12: 9,062,743 (GRCm39)		probably null	Het
Zan	A	G	5: 137,411,620 (GRCm39)		probably null	Het
Zap70	G	T	1: 36,818,365 (GRCm39)	V351L	probably damaging	Het
Zfp609	G	T	9: 65,609,916 (GRCm39)	Q1016K	unknown	Het
Zfp641	C	A	15: 98,187,060 (GRCm39)	V188L	probably benign	Het
Zpld2	A	T	4: 133,930,089 (GRCm39)	L72Q	probably damaging	Het

Other mutations in Rnf145

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00087:Rnf145	APN	11	44,446,039 (GRCm39)	missense	possibly damaging	0.90
IGL02972:Rnf145	APN	11	44,454,865 (GRCm39)	missense	probably benign	0.26
IGL03168:Rnf145	APN	11	44,445,985 (GRCm39)	missense	probably damaging	1.00
IGL03185:Rnf145	APN	11	44,422,157 (GRCm39)	missense	probably damaging	1.00
IGL02980:Rnf145	UTSW	11	44,452,484 (GRCm39)	missense	probably benign
R0112:Rnf145	UTSW	11	44,454,978 (GRCm39)	missense	probably benign
R0346:Rnf145	UTSW	11	44,445,991 (GRCm39)	missense	probably damaging	1.00
R0415:Rnf145	UTSW	11	44,415,965 (GRCm39)	missense	probably damaging	0.99
R0452:Rnf145	UTSW	11	44,452,587 (GRCm39)	missense	probably damaging	1.00
R0598:Rnf145	UTSW	11	44,439,770 (GRCm39)	missense	probably damaging	1.00
R0631:Rnf145	UTSW	11	44,450,851 (GRCm39)	missense	probably damaging	0.99
R0837:Rnf145	UTSW	11	44,415,815 (GRCm39)	missense	probably benign	0.00
R1611:Rnf145	UTSW	11	44,442,625 (GRCm39)	missense	probably damaging	1.00
R1971:Rnf145	UTSW	11	44,439,642 (GRCm39)	missense	probably damaging	1.00
R1991:Rnf145	UTSW	11	44,452,293 (GRCm39)	missense	possibly damaging	0.90
R2157:Rnf145	UTSW	11	44,445,997 (GRCm39)	missense	probably damaging	1.00
R2340:Rnf145	UTSW	11	44,422,205 (GRCm39)	missense	probably benign	0.04
R3855:Rnf145	UTSW	11	44,422,120 (GRCm39)	missense	possibly damaging	0.46
R4483:Rnf145	UTSW	11	44,455,104 (GRCm39)	missense	probably benign	0.10
R4564:Rnf145	UTSW	11	44,439,635 (GRCm39)	missense	probably benign	0.25
R4922:Rnf145	UTSW	11	44,448,063 (GRCm39)	unclassified	probably benign
R5633:Rnf145	UTSW	11	44,450,915 (GRCm39)	missense	probably damaging	1.00
R5672:Rnf145	UTSW	11	44,422,120 (GRCm39)	missense	possibly damaging	0.46
R5673:Rnf145	UTSW	11	44,422,120 (GRCm39)	missense	possibly damaging	0.46
R5701:Rnf145	UTSW	11	44,422,120 (GRCm39)	missense	possibly damaging	0.46
R5915:Rnf145	UTSW	11	44,433,549 (GRCm39)	critical splice donor site	probably null
R6128:Rnf145	UTSW	11	44,446,018 (GRCm39)	missense	probably damaging	1.00
R6502:Rnf145	UTSW	11	44,415,932 (GRCm39)	missense	probably damaging	0.98
R6717:Rnf145	UTSW	11	44,452,317 (GRCm39)	missense	probably benign	0.00
R6963:Rnf145	UTSW	11	44,455,104 (GRCm39)	missense	probably benign	0.10
R7035:Rnf145	UTSW	11	44,452,583 (GRCm39)	missense	probably damaging	1.00
R7154:Rnf145	UTSW	11	44,415,822 (GRCm39)	missense	probably damaging	1.00
R7351:Rnf145	UTSW	11	44,439,623 (GRCm39)	missense	possibly damaging	0.91
R7639:Rnf145	UTSW	11	44,422,184 (GRCm39)	missense	probably damaging	1.00
R8074:Rnf145	UTSW	11	44,448,263 (GRCm39)	missense	probably damaging	0.98
R8536:Rnf145	UTSW	11	44,450,942 (GRCm39)	missense	probably damaging	1.00
R8861:Rnf145	UTSW	11	44,445,984 (GRCm39)	missense	probably damaging	1.00
R9123:Rnf145	UTSW	11	44,450,819 (GRCm39)	missense	probably damaging	1.00
R9125:Rnf145	UTSW	11	44,450,819 (GRCm39)	missense	probably damaging	1.00
R9172:Rnf145	UTSW	11	44,448,262 (GRCm39)	missense	possibly damaging	0.95
R9520:Rnf145	UTSW	11	44,452,336 (GRCm39)	missense	possibly damaging	0.91
R9711:Rnf145	UTSW	11	44,415,830 (GRCm39)	nonsense	probably null
R9801:Rnf145	UTSW	11	44,448,112 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TGATCTAACTCTGCAAATGTAAAGGCGT -3'
(R):5'- AGCCCCTGGGAGAAAGCACTAA -3'

Sequencing Primer
(F):5'- CTCTGCAAATGTAAAGGCGTAAAATG -3'
(R):5'- CGTGCTTCAAATGGGAAGAC -3'

Posted On

2013-05-23