Mutagenetix > Incidental Mutation

Incidental Mutation 'R2520:Slc35f3'

254368

Institutional Source

Beutler Lab

Gene Symbol

Slc35f3

Ensembl Gene

ENSMUSG00000057060

Gene Name

solute carrier family 35, member F3

Synonyms

B230375D17Rik

MMRRC Submission

040424-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.160) question?

Stock #

R2520 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

126865734-127122717 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 127121312 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Glutamic Acid at position 391 (V391E)

Ref Sequence

ENSEMBL: ENSMUSP00000104390 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000108759]

AlphaFold

Q1LZI2

Predicted Effect

possibly damaging
Transcript: ENSMUST00000108759
AA Change: V391E

PolyPhen 2 Score 0.808 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000104390
Gene: ENSMUSG00000057060
AA Change: V391E

Domain	Start	End	E-Value	Type
low complexity region	25	49	N/A	INTRINSIC
Pfam:EamA	67	223	3.2e-7	PFAM
Pfam:SLC35F	145	374	3.2e-6	PFAM

Coding Region Coverage

1x: 99.2%
3x: 98.6%
10x: 97.3%
20x: 95.1%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 73 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700109H08Rik	A	T	5: 3,625,773 (GRCm39)	N70I	probably damaging	Het
4930503B20Rik	G	A	3: 146,356,261 (GRCm39)	R216W	probably damaging	Het
Abcb9	C	T	5: 124,218,091 (GRCm39)		probably null	Het
Arhgdia	A	T	11: 120,470,852 (GRCm39)	V72E	probably damaging	Het
Arsb	A	T	13: 94,077,207 (GRCm39)	K525*	probably null	Het
Bckdha	A	C	7: 25,341,124 (GRCm39)	I79S	probably benign	Het
Carm1	G	A	9: 21,494,893 (GRCm39)		probably null	Het
Cers5	G	A	15: 99,634,262 (GRCm39)	T362I	probably damaging	Het
Clec4b2	T	A	6: 123,177,942 (GRCm39)	F86I	probably damaging	Het
Crispld1	G	A	1: 17,821,000 (GRCm39)	D347N	probably damaging	Het
Csf3r	A	T	4: 125,929,145 (GRCm39)	T352S	probably benign	Het
Daam2	G	A	17: 49,787,785 (GRCm39)	Q443*	probably null	Het
Dcbld1	A	G	10: 52,195,641 (GRCm39)	D283G	probably damaging	Het
Dpp9	T	C	17: 56,513,868 (GRCm39)	E82G	probably damaging	Het
Dync1li1	A	G	9: 114,518,074 (GRCm39)	D42G	probably null	Het
Eml6	T	C	11: 29,741,993 (GRCm39)	H1130R	probably damaging	Het
Enox1	A	T	14: 77,819,839 (GRCm39)	Y198F	probably damaging	Het
Epop	A	G	11: 97,519,554 (GRCm39)	L185P	probably benign	Het
Frem1	A	T	4: 82,868,527 (GRCm39)	C1485S	probably damaging	Het
Gbf1	T	A	19: 46,253,806 (GRCm39)	S571T	probably benign	Het
Gm5965	A	T	16: 88,575,414 (GRCm39)	I196F	probably null	Het
Gm8237	T	A	14: 5,863,642 (GRCm38)	I8L	possibly damaging	Het
Gria2	A	C	3: 80,614,269 (GRCm39)	N590K	probably damaging	Het
Hectd2	T	A	19: 36,589,633 (GRCm39)		probably null	Het
Hmcn1	T	A	1: 150,619,398 (GRCm39)	T1239S	possibly damaging	Het
Hps3	A	T	3: 20,083,194 (GRCm39)	D167E	probably damaging	Het
Htr1a	A	G	13: 105,581,881 (GRCm39)	S374G	probably benign	Het
Il16	C	T	7: 83,301,202 (GRCm39)	G307S	probably benign	Het
Ipmk	T	C	10: 71,217,047 (GRCm39)	F198S	probably damaging	Het
Lyz2	T	A	10: 117,114,558 (GRCm39)	I124F	probably damaging	Het
Maea	T	C	5: 33,515,854 (GRCm39)	V47A	probably damaging	Het
Mrc2	G	A	11: 105,239,257 (GRCm39)		probably null	Het
Mrgpra1	A	T	7: 46,985,020 (GRCm39)	C220S	possibly damaging	Het
Myo5c	A	T	9: 75,204,931 (GRCm39)	K1595*	probably null	Het
Naga	G	T	15: 82,214,295 (GRCm39)	D405E	probably benign	Het
Nanog	T	A	6: 122,690,418 (GRCm39)	N249K	probably benign	Het
Nhlh1	G	T	1: 171,881,570 (GRCm39)	R99S	probably damaging	Het
Ntrk2	T	A	13: 59,202,090 (GRCm39)		probably null	Het
Nudt2	A	G	4: 41,480,354 (GRCm39)	E79G	probably benign	Het
Or2ad1	A	T	13: 21,326,746 (GRCm39)	C160*	probably null	Het
Or4f60	A	T	2: 111,902,013 (GRCm39)	M305K	probably benign	Het
Or52n2	T	A	7: 104,542,080 (GRCm39)	I252F	probably benign	Het
Pitpnm2	T	C	5: 124,267,464 (GRCm39)	D592G	probably damaging	Het
Prps1l3	T	C	12: 57,285,369 (GRCm39)	V53A	probably damaging	Het
Psmd2	T	G	16: 20,481,826 (GRCm39)	V853G	probably damaging	Het
Pycard	A	G	7: 127,592,677 (GRCm39)	I50T	possibly damaging	Het
Rif1	GCCACCA	GCCA	2: 52,000,336 (GRCm39)		probably benign	Het
Rnf168	T	A	16: 32,097,221 (GRCm39)	S99T	probably benign	Het
Rph3al	A	G	11: 75,797,373 (GRCm39)	S108P	possibly damaging	Het
Sdk1	G	A	5: 142,071,526 (GRCm39)	A979T	probably benign	Het
Sec16a	G	A	2: 26,331,368 (GRCm39)	Q216*	probably null	Het
Slf1	T	A	13: 77,199,384 (GRCm39)	I666F	probably damaging	Het
Slfn14	A	G	11: 83,167,013 (GRCm39)	V834A	probably damaging	Het
Tab2	G	A	10: 7,783,245 (GRCm39)	P679L	probably damaging	Het
Tbc1d10b	A	G	7: 126,799,455 (GRCm39)		probably null	Het
Tmeff1	T	A	4: 48,604,679 (GRCm39)	C91S	probably damaging	Het
Tmem108	G	T	9: 103,366,481 (GRCm39)	N503K	possibly damaging	Het
Trbv28	A	G	6: 41,248,541 (GRCm39)	T24A	probably damaging	Het
Trim34b	A	G	7: 103,980,446 (GRCm39)	E178G	probably damaging	Het
Trmt1l	T	A	1: 151,329,696 (GRCm39)	H546Q	probably benign	Het
Ttc39d	A	G	17: 80,523,799 (GRCm39)	I153V	probably benign	Het
Ttll13	T	C	7: 79,899,964 (GRCm39)	V101A	probably damaging	Het
Ubash3b	A	T	9: 40,926,243 (GRCm39)	H501Q	probably damaging	Het
Upf3a	T	A	8: 13,846,443 (GRCm39)		probably null	Het
Usp48	A	G	4: 137,352,562 (GRCm39)	S94G	probably benign	Het
Wdr86	T	C	5: 24,917,573 (GRCm39)	*381W	probably null	Het
Wdr90	G	A	17: 26,074,326 (GRCm39)	P680S	probably damaging	Het
Zbtb22	G	A	17: 34,135,956 (GRCm39)	V34M	probably damaging	Het
Zbtb8a	A	G	4: 129,253,689 (GRCm39)		probably null	Het
Zfhx4	C	T	3: 5,468,418 (GRCm39)	P2859S	probably benign	Het
Zfp512b	A	G	2: 181,231,295 (GRCm39)	V295A	probably damaging	Het
Zfp608	A	T	18: 55,121,578 (GRCm39)	V3E	possibly damaging	Het
Zfp748	G	T	13: 67,694,781 (GRCm39)	D32E	possibly damaging	Het

Other mutations in Slc35f3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00687:Slc35f3	APN	8	127,108,903 (GRCm39)	missense	probably benign	0.02
IGL00956:Slc35f3	APN	8	127,108,963 (GRCm39)	missense	probably damaging	1.00
IGL01105:Slc35f3	APN	8	127,025,553 (GRCm39)	missense	probably damaging	1.00
IGL01710:Slc35f3	APN	8	127,115,900 (GRCm39)	missense	probably benign	0.00
IGL01771:Slc35f3	APN	8	127,115,951 (GRCm39)	missense	probably benign	0.00
IGL02254:Slc35f3	APN	8	127,115,862 (GRCm39)	missense	probably damaging	1.00
IGL02610:Slc35f3	APN	8	127,047,956 (GRCm39)	missense	probably damaging	1.00
R1666:Slc35f3	UTSW	8	127,115,960 (GRCm39)	missense	probably damaging	0.98
R2510:Slc35f3	UTSW	8	127,025,445 (GRCm39)	start gained	probably benign
R3807:Slc35f3	UTSW	8	127,115,978 (GRCm39)	missense	probably damaging	1.00
R4644:Slc35f3	UTSW	8	127,047,809 (GRCm39)	missense	possibly damaging	0.87
R4675:Slc35f3	UTSW	8	127,047,935 (GRCm39)	nonsense	probably null
R4976:Slc35f3	UTSW	8	127,116,020 (GRCm39)	splice site	probably null
R5037:Slc35f3	UTSW	8	127,116,011 (GRCm39)	missense	probably damaging	0.99
R5225:Slc35f3	UTSW	8	127,117,846 (GRCm39)	missense	probably damaging	0.98
R5259:Slc35f3	UTSW	8	127,115,872 (GRCm39)	missense	probably damaging	1.00
R5856:Slc35f3	UTSW	8	127,047,819 (GRCm39)	missense	probably benign	0.07
R5925:Slc35f3	UTSW	8	127,115,946 (GRCm39)	missense	probably benign	0.24
R6254:Slc35f3	UTSW	8	127,047,833 (GRCm39)	missense	possibly damaging	0.96
R6748:Slc35f3	UTSW	8	127,121,377 (GRCm39)	nonsense	probably null
R6785:Slc35f3	UTSW	8	127,121,198 (GRCm39)	missense	probably benign	0.02
R7002:Slc35f3	UTSW	8	127,115,773 (GRCm39)	critical splice acceptor site	unknown
R7291:Slc35f3	UTSW	8	127,121,297 (GRCm39)	missense	probably benign	0.02
R7411:Slc35f3	UTSW	8	127,115,777 (GRCm39)	critical splice acceptor site	probably benign
R7456:Slc35f3	UTSW	8	127,115,779 (GRCm39)	critical splice acceptor site	unknown
R7790:Slc35f3	UTSW	8	127,115,777 (GRCm39)	critical splice acceptor site	probably benign
R7852:Slc35f3	UTSW	8	127,121,219 (GRCm39)	missense	probably damaging	1.00
R8000:Slc35f3	UTSW	8	127,047,812 (GRCm39)	missense	probably benign
R8277:Slc35f3	UTSW	8	127,115,925 (GRCm39)	missense	possibly damaging	0.88
R8827:Slc35f3	UTSW	8	127,115,780 (GRCm39)	critical splice acceptor site	probably benign
R8983:Slc35f3	UTSW	8	127,115,775 (GRCm39)	critical splice acceptor site	probably benign
R9205:Slc35f3	UTSW	8	127,115,928 (GRCm39)	missense	probably damaging	0.96
R9355:Slc35f3	UTSW	8	127,108,967 (GRCm39)	missense	probably damaging	0.97
R9475:Slc35f3	UTSW	8	127,108,993 (GRCm39)	missense	probably damaging	1.00
R9492:Slc35f3	UTSW	8	127,048,026 (GRCm39)	missense	probably damaging	1.00
R9714:Slc35f3	UTSW	8	127,115,781 (GRCm39)	critical splice acceptor site	probably benign
R9729:Slc35f3	UTSW	8	127,115,777 (GRCm39)	critical splice acceptor site	probably benign
R9769:Slc35f3	UTSW	8	127,121,336 (GRCm39)	missense	probably damaging	0.99
X0067:Slc35f3	UTSW	8	127,109,062 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- ATCTCCACGTCCACAGACTG -3'
(R):5'- ACCGTAGAACTTACTGCAGTTAC -3'

Sequencing Primer
(F):5'- TCCACAGACTGAGTAACCGGTG -3'
(R):5'- TGTATGTACACCTCACCCAACTGAG -3'

Posted On

2014-12-04