Incidental Mutation 'R4163:Gm128'
ID321599
Institutional Source Beutler Lab
Gene Symbol Gm128
Ensembl Gene ENSMUSG00000068860
Gene Namepredicted gene 128
SynonymsMent, LOC229588, Pmis1
MMRRC Submission 041006-MU
Accession Numbers
Is this an essential gene? Non essential (E-score: 0.000) question?
Stock #R4163 (G1)
Quality Score225
Status Validated
Chromosome3
Chromosomal Location95236920-95241598 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to A at 95240491 bp
ZygosityHeterozygous
Amino Acid Change Arginine to Leucine at position 164 (R164L)
Ref Sequence ENSEMBL: ENSMUSP00000088324 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000053872] [ENSMUST00000090815] [ENSMUST00000098871] [ENSMUST00000107195] [ENSMUST00000107197] [ENSMUST00000125515] [ENSMUST00000137250]
Predicted Effect probably benign
Transcript: ENSMUST00000053872
Predicted Effect probably benign
Transcript: ENSMUST00000090815
AA Change: R164L

PolyPhen 2 Score 0.061 (Sensitivity: 0.94; Specificity: 0.84)
SMART Domains Protein: ENSMUSP00000088324
Gene: ENSMUSG00000068860
AA Change: R164L

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:PMSI1 23 345 3.1e-144 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000098871
SMART Domains Protein: ENSMUSP00000096468
Gene: ENSMUSG00000028115

DomainStartEndE-ValueType
low complexity region 2 31 N/A INTRINSIC
Pfam:BNIP2 48 178 4.5e-38 PFAM
Pfam:CRAL_TRIO_2 162 273 7.7e-16 PFAM
Pfam:CRAL_TRIO 196 263 3.2e-10 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000107195
SMART Domains Protein: ENSMUSP00000102813
Gene: ENSMUSG00000028115

DomainStartEndE-ValueType
low complexity region 33 44 N/A INTRINSIC
low complexity region 50 62 N/A INTRINSIC
low complexity region 104 117 N/A INTRINSIC
SEC14 193 348 7.89e-13 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000107197
SMART Domains Protein: ENSMUSP00000102815
Gene: ENSMUSG00000068860

DomainStartEndE-ValueType
signal peptide 1 22 N/A INTRINSIC
Pfam:PMSI1 23 130 1.8e-32 PFAM
Pfam:PMSI1 121 184 1.2e-26 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000125515
SMART Domains Protein: ENSMUSP00000120545
Gene: ENSMUSG00000028115

DomainStartEndE-ValueType
low complexity region 2 31 N/A INTRINSIC
Pfam:BNIP2 48 178 3.7e-38 PFAM
Pfam:CRAL_TRIO_2 168 259 7.5e-15 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000137250
SMART Domains Protein: ENSMUSP00000115197
Gene: ENSMUSG00000028115

DomainStartEndE-ValueType
low complexity region 5 16 N/A INTRINSIC
low complexity region 22 34 N/A INTRINSIC
low complexity region 76 89 N/A INTRINSIC
SEC14 165 320 7.89e-13 SMART
Predicted Effect noncoding transcript
Transcript: ENSMUST00000176070
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.7%
  • 10x: 97.5%
  • 20x: 95.8%
Validation Efficiency 100% (59/59)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene is a proto-oncogene whose promoter is methylated by DNA methyltransferase 3B (DNMT3B), which represses the proto-oncogene. However, a catalytically inactive isoform of DNMT3B is overexpressed in lymphomas, leading to hypomethylation of the proto-oncogene's promoter and derepression of the proto-oncogene. [provided by RefSeq, Sep 2016]
PHENOTYPE: A targeted mutation results in slightly decreased fertilization rates for males, although normal litter sizes are produced. Phenotypic analysis of mice homozygous for a gene trap allele indicates no notable phenotype in any parameter tested. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 51 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930539E08Rik T C 17: 28,899,529 Y643C probably benign Het
4930555F03Rik G A 8: 49,495,496 noncoding transcript Het
Abca8a C T 11: 110,050,982 D1154N probably benign Het
Adgrf4 A G 17: 42,667,586 F289L probably benign Het
Alkbh2 A G 5: 114,127,552 L63S probably damaging Het
Atp13a4 A T 16: 29,541,250 N19K possibly damaging Het
Birc6 T A 17: 74,626,980 Y2544N probably damaging Het
Bpifa3 A G 2: 154,135,596 N118S probably damaging Het
Chst10 T A 1: 38,871,823 M87L probably benign Het
Cnot9 C T 1: 74,528,847 P298L probably damaging Het
Cops5 T C 1: 10,030,687 Y228C probably damaging Het
Dcaf8 T G 1: 172,192,570 L492R probably damaging Het
Dis3l2 A G 1: 86,821,237 S128G probably benign Het
Dock1 A G 7: 134,744,322 R198G possibly damaging Het
Elovl7 T A 13: 108,267,370 M82K possibly damaging Het
Fam189a2 G A 19: 23,975,629 A439V probably damaging Het
Fam189a2 C T 19: 23,975,638 S436N probably damaging Het
Fcgr2b T C 1: 170,963,447 D259G possibly damaging Het
Flnb A T 14: 7,915,374 I1502F possibly damaging Het
Frk C T 10: 34,591,872 P294L probably damaging Het
Gkn3 C T 6: 87,383,525 A163T probably damaging Het
Gm2223 C T X: 33,505,784 noncoding transcript Het
Hexdc C A 11: 121,221,149 A423E probably benign Het
Itgax G T 7: 128,144,700 V878F probably benign Het
Kank2 A T 9: 21,795,568 D51E probably damaging Het
Kcna4 G C 2: 107,295,806 W295S probably damaging Het
Mfsd12 A G 10: 81,361,097 probably null Het
Mis12 A G 11: 71,025,656 T172A probably benign Het
Myo10 T A 15: 25,726,415 probably null Het
Myo18a G T 11: 77,829,708 R1103L possibly damaging Het
Nfix CAAAAA CAAAA 8: 84,716,247 probably null Het
Ntrk2 T C 13: 58,860,240 V272A probably damaging Het
Olfr488 A T 7: 108,255,832 I102N probably benign Het
Olfr58 A T 9: 19,783,790 Y219F possibly damaging Het
Olfr699 A T 7: 106,790,279 C241S probably damaging Het
Pcdh20 C T 14: 88,468,179 D562N probably damaging Het
Prep T C 10: 45,067,340 F4L probably benign Het
Prep G T 10: 45,067,362 R11L possibly damaging Het
Ptgs1 C T 2: 36,251,334 R598C possibly damaging Het
Rasgrp1 T C 2: 117,282,654 D759G probably benign Het
Setd5 T C 6: 113,119,584 S584P probably benign Het
Shank3 A G 15: 89,549,594 D1514G probably damaging Het
Shox2 T C 3: 66,973,771 probably benign Het
Slc44a5 A T 3: 154,261,373 R565S possibly damaging Het
Slc7a5 A G 8: 121,888,400 L236S probably benign Het
Slfn3 A T 11: 83,212,770 I156F probably damaging Het
Spout1 C T 2: 30,177,577 probably benign Het
Trim72 T C 7: 128,007,908 V203A probably benign Het
Vrk2 T A 11: 26,547,915 I90L probably benign Het
Zc3h12c A T 9: 52,115,699 Y788N probably damaging Het
Zfp831 A G 2: 174,644,029 T166A possibly damaging Het
Other mutations in Gm128
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01583:Gm128 APN 3 95240783 missense possibly damaging 0.60
IGL02499:Gm128 APN 3 95240681 missense possibly damaging 0.86
R1033:Gm128 UTSW 3 95240011 missense possibly damaging 0.51
R2051:Gm128 UTSW 3 95240740 missense possibly damaging 0.92
R2240:Gm128 UTSW 3 95240932 missense probably benign 0.00
R2347:Gm128 UTSW 3 95240930 missense probably benign 0.02
R2513:Gm128 UTSW 3 95239982 missense possibly damaging 0.95
R4550:Gm128 UTSW 3 95240161 missense possibly damaging 0.92
R6912:Gm128 UTSW 3 95240429 missense probably benign 0.32
R7359:Gm128 UTSW 3 95240623 missense probably benign 0.11
R7418:Gm128 UTSW 3 95240567 missense possibly damaging 0.71
Predicted Primers PCR Primer
(F):5'- CCTGACTTACAGTGGCAATGC -3'
(R):5'- TGTCCACCGTGACAGGCTATAG -3'

Sequencing Primer
(F):5'- TCAGTACTACCCGCAGAT -3'
(R):5'- TATAGCCGGTCATCAGTGCC -3'
Posted On2015-06-12