Incidental Mutation 'R7290:Kifc2'
ID 566361
Institutional Source Beutler Lab
Gene Symbol Kifc2
Ensembl Gene ENSMUSG00000004187
Gene Name kinesin family member C2
Synonyms
MMRRC Submission 045362-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R7290 (G1)
Quality Score 198.009
Status Not validated
Chromosome 15
Chromosomal Location 76544058-76552396 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 76544904 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Phenylalanine at position 13 (Y13F)
Ref Sequence ENSEMBL: ENSMUSP00000004294 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000004294] [ENSMUST00000066677] [ENSMUST00000081291] [ENSMUST00000176274] [ENSMUST00000177359] [ENSMUST00000229524] [ENSMUST00000230451] [ENSMUST00000230964] [ENSMUST00000231152]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000004294
AA Change: Y13F

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000004294
Gene: ENSMUSG00000004187
AA Change: Y13F

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
low complexity region 36 45 N/A INTRINSIC
low complexity region 117 129 N/A INTRINSIC
low complexity region 179 192 N/A INTRINSIC
coiled coil region 195 235 N/A INTRINSIC
coiled coil region 274 345 N/A INTRINSIC
KISc 407 740 3.21e-141 SMART
low complexity region 745 781 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000066677
SMART Domains Protein: ENSMUSP00000063317
Gene: ENSMUSG00000053929

DomainStartEndE-ValueType
signal peptide 1 32 N/A INTRINSIC
transmembrane domain 35 52 N/A INTRINSIC
transmembrane domain 62 84 N/A INTRINSIC
transmembrane domain 91 108 N/A INTRINSIC
transmembrane domain 113 135 N/A INTRINSIC
low complexity region 151 163 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000081291
SMART Domains Protein: ENSMUSP00000080043
Gene: ENSMUSG00000053929

DomainStartEndE-ValueType
SCOP:d1jm7a_ 21 88 3e-5 SMART
Blast:RING 27 62 8e-15 BLAST
Predicted Effect probably benign
Transcript: ENSMUST00000176274
SMART Domains Protein: ENSMUSP00000134739
Gene: ENSMUSG00000053929

DomainStartEndE-ValueType
low complexity region 3 48 N/A INTRINSIC
low complexity region 78 91 N/A INTRINSIC
RING 106 150 1.9e-1 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000177359
SMART Domains Protein: ENSMUSP00000135505
Gene: ENSMUSG00000053929

DomainStartEndE-ValueType
signal peptide 1 32 N/A INTRINSIC
transmembrane domain 35 52 N/A INTRINSIC
transmembrane domain 62 84 N/A INTRINSIC
transmembrane domain 91 108 N/A INTRINSIC
transmembrane domain 113 135 N/A INTRINSIC
low complexity region 151 163 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000229524
Predicted Effect probably benign
Transcript: ENSMUST00000230451
Predicted Effect possibly damaging
Transcript: ENSMUST00000230964
AA Change: Y13F

PolyPhen 2 Score 0.659 (Sensitivity: 0.86; Specificity: 0.91)
Predicted Effect probably benign
Transcript: ENSMUST00000231152
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 100.0%
  • 10x: 99.7%
  • 20x: 99.1%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele are viable and fertile with no apparent defects in development or behavior. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 79 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8a T A 11: 109,921,714 (GRCm39) M1447L probably benign Het
Adam30 G A 3: 98,070,257 (GRCm39) V697I probably benign Het
Adamts12 A G 15: 11,277,452 (GRCm39) N689D probably benign Het
Adamts15 T C 9: 30,813,906 (GRCm39) K753R probably benign Het
Adra2a T C 19: 54,034,835 (GRCm39) F64L probably damaging Het
Ankub1 A G 3: 57,580,345 (GRCm39) L104P probably damaging Het
Arel1 A G 12: 84,988,719 (GRCm39) V10A probably benign Het
Atad2 A T 15: 57,962,047 (GRCm39) N1165K probably benign Het
Atp6v0d2 T A 4: 19,880,060 (GRCm39) D279V probably benign Het
Cadps A T 14: 12,616,099 (GRCm38) D310E probably damaging Het
Caskin2 T C 11: 115,695,615 (GRCm39) I249V possibly damaging Het
Cdh23 T C 10: 60,212,620 (GRCm39) N1598S probably benign Het
Cep250 A T 2: 155,834,682 (GRCm39) Q2202H probably benign Het
Ces5a T A 8: 94,261,311 (GRCm39) T35S probably damaging Het
Cnot11 G A 1: 39,579,020 (GRCm39) W295* probably null Het
Cntnap5a G T 1: 116,149,619 (GRCm39) W565L probably damaging Het
Dgka T C 10: 128,569,468 (GRCm39) E148G probably damaging Het
Dnah14 G A 1: 181,455,739 (GRCm39) D955N probably benign Het
Erbin G A 13: 103,998,834 (GRCm39) T184I probably damaging Het
Fam20c G T 5: 138,793,309 (GRCm39) G477W probably damaging Het
Fan1 T A 7: 64,022,234 (GRCm39) N340Y probably damaging Het
Fgfr4 T C 13: 55,309,262 (GRCm39) V433A probably benign Het
Gal3st1 A T 11: 3,948,093 (GRCm39) Q100L possibly damaging Het
Gfra2 T C 14: 71,163,380 (GRCm39) F221S probably damaging Het
Gm19965 G A 1: 116,748,921 (GRCm39) V201M Het
Gnb1l A T 16: 18,382,806 (GRCm39) T282S probably benign Het
Gpr171 A T 3: 59,005,147 (GRCm39) N209K probably benign Het
Greb1 G A 12: 16,761,739 (GRCm39) T547I probably damaging Het
Ifi214 A T 1: 173,357,097 (GRCm39) V2E probably benign Het
Ighv1-71 T C 12: 115,706,267 (GRCm39) M1V probably null Het
Itm2b C T 14: 73,605,785 (GRCm39) G67D probably damaging Het
Kif21a A T 15: 90,851,432 (GRCm39) C995* probably null Het
Lamb1 T A 12: 31,315,595 (GRCm39) V59D probably benign Het
Lhx1 A T 11: 84,412,703 (GRCm39) D163E probably damaging Het
Lrrc1 A T 9: 77,365,121 (GRCm39) Y187N probably benign Het
Map3k1 C A 13: 111,904,645 (GRCm39) V380F probably damaging Het
Mapk11 T C 15: 89,028,511 (GRCm39) D283G probably damaging Het
Mccc2 G T 13: 100,091,207 (GRCm39) A430D probably damaging Het
Mest A G 6: 30,747,158 (GRCm39) N340S unknown Het
Mms22l T C 4: 24,517,139 (GRCm39) L340P probably benign Het
Mrnip A G 11: 50,087,808 (GRCm39) Y110C possibly damaging Het
Mtmr4 A G 11: 87,502,063 (GRCm39) T706A probably benign Het
Muc21 G A 17: 35,929,761 (GRCm39) A1475V unknown Het
Ncstn A G 1: 171,900,373 (GRCm39) F234S probably benign Het
Nrp1 T C 8: 129,202,777 (GRCm39) probably null Het
Nup37 T G 10: 88,010,356 (GRCm39) C217G probably damaging Het
Or8g22 A G 9: 38,958,694 (GRCm39) L7P unknown Het
Pdzrn3 T C 6: 101,128,206 (GRCm39) N820S probably benign Het
Pgap1 A T 1: 54,587,225 (GRCm39) F117Y possibly damaging Het
Phip A T 9: 82,753,346 (GRCm39) F1799L possibly damaging Het
Ppm1f T A 16: 16,728,819 (GRCm39) F74I probably benign Het
Prpf8 C A 11: 75,384,783 (GRCm39) N775K possibly damaging Het
Ptdss2 T C 7: 140,731,693 (GRCm39) I167T possibly damaging Het
Ptpn18 G A 1: 34,501,892 (GRCm39) probably null Het
Rbl2 C A 8: 91,841,669 (GRCm39) A955D probably benign Het
Rgl1 A G 1: 152,420,146 (GRCm39) S366P possibly damaging Het
Rit2 A T 18: 31,376,221 (GRCm39) M38K possibly damaging Het
Robo1 A G 16: 72,801,408 (GRCm39) M1011V probably benign Het
Senp6 A T 9: 80,043,797 (GRCm39) E809D probably benign Het
Stard3 G A 11: 98,269,045 (GRCm39) probably null Het
Taar3 T G 10: 23,826,298 (GRCm39) Y281* probably null Het
Tacc2 G T 7: 130,331,103 (GRCm39) K352N probably benign Het
Tamalin G A 15: 101,129,419 (GRCm39) S234N probably damaging Het
Tasor T A 14: 27,160,610 (GRCm39) I124N probably damaging Het
Tdpoz4 G A 3: 93,704,155 (GRCm39) V151I not run Het
Tenm2 A G 11: 35,914,298 (GRCm39) L2413P probably damaging Het
Tgm6 T C 2: 129,983,110 (GRCm39) V233A probably damaging Het
Tlx3 G A 11: 33,153,514 (GRCm39) probably benign Het
Tmem94 G T 11: 115,677,082 (GRCm39) R118L possibly damaging Het
Trim23 C A 13: 104,323,941 (GRCm39) H133Q probably damaging Het
Unc80 A T 1: 66,640,356 (GRCm39) D1421V probably damaging Het
Vmn1r172 A G 7: 23,360,048 (GRCm39) N311S unknown Het
Vps25 T A 11: 101,149,775 (GRCm39) L153Q probably damaging Het
Wbp1l G T 19: 46,611,876 (GRCm39) probably benign Het
Ythdc2 A G 18: 44,970,558 (GRCm39) I291V possibly damaging Het
Zfp2 A G 11: 50,791,570 (GRCm39) C158R probably damaging Het
Zfp786 G A 6: 47,796,929 (GRCm39) P670S probably damaging Het
Zfp827 G A 8: 79,916,442 (GRCm39) R339H possibly damaging Het
Zmym6 C T 4: 127,017,294 (GRCm39) A1025V possibly damaging Het
Other mutations in Kifc2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00231:Kifc2 APN 15 76,551,662 (GRCm39) utr 3 prime probably benign
IGL01341:Kifc2 APN 15 76,547,098 (GRCm39) critical splice donor site probably null
IGL02161:Kifc2 APN 15 76,550,245 (GRCm39) missense probably damaging 1.00
IGL02675:Kifc2 APN 15 76,547,179 (GRCm39) missense probably damaging 1.00
IGL02997:Kifc2 APN 15 76,548,539 (GRCm39) missense possibly damaging 0.83
R0034:Kifc2 UTSW 15 76,551,300 (GRCm39) missense probably benign 0.18
R1818:Kifc2 UTSW 15 76,550,281 (GRCm39) missense probably damaging 1.00
R1961:Kifc2 UTSW 15 76,547,025 (GRCm39) missense probably damaging 1.00
R2104:Kifc2 UTSW 15 76,545,454 (GRCm39) missense probably damaging 0.99
R2149:Kifc2 UTSW 15 76,546,421 (GRCm39) missense probably benign 0.00
R3086:Kifc2 UTSW 15 76,551,452 (GRCm39) missense probably benign 0.01
R4704:Kifc2 UTSW 15 76,547,177 (GRCm39) splice site probably null
R4782:Kifc2 UTSW 15 76,548,548 (GRCm39) missense possibly damaging 0.89
R4834:Kifc2 UTSW 15 76,545,511 (GRCm39) start codon destroyed probably null 0.48
R5085:Kifc2 UTSW 15 76,545,496 (GRCm39) missense probably damaging 1.00
R5160:Kifc2 UTSW 15 76,547,177 (GRCm39) missense probably damaging 1.00
R5253:Kifc2 UTSW 15 76,550,481 (GRCm39) missense possibly damaging 0.94
R5543:Kifc2 UTSW 15 76,551,242 (GRCm39) missense probably damaging 0.99
R5786:Kifc2 UTSW 15 76,548,578 (GRCm39) missense probably damaging 1.00
R5805:Kifc2 UTSW 15 76,546,353 (GRCm39) missense probably benign 0.00
R7311:Kifc2 UTSW 15 76,547,010 (GRCm39) missense probably damaging 1.00
R7511:Kifc2 UTSW 15 76,545,537 (GRCm39) missense possibly damaging 0.50
R7782:Kifc2 UTSW 15 76,548,328 (GRCm39) missense probably benign 0.00
R8816:Kifc2 UTSW 15 76,548,371 (GRCm39) missense probably damaging 1.00
R8834:Kifc2 UTSW 15 76,551,250 (GRCm39) missense probably damaging 1.00
R9010:Kifc2 UTSW 15 76,550,885 (GRCm39) missense possibly damaging 0.69
R9574:Kifc2 UTSW 15 76,546,397 (GRCm39) missense probably damaging 1.00
Z1177:Kifc2 UTSW 15 76,545,488 (GRCm39) missense possibly damaging 0.95
Predicted Primers PCR Primer
(F):5'- ACCGCTTGATAGGGCCTTAAG -3'
(R):5'- CTATTTCCCAGAGCAGGTACC -3'

Sequencing Primer
(F):5'- GGCCTTAAGTACAAGTTTTGCAGCTC -3'
(R):5'- TATTTCCCAGAGCAGGTACCTAAGG -3'
Posted On 2019-06-26