Incidental Mutation 'R7805:Or5g25'
| ID |
600710 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5g25
|
| Ensembl Gene |
ENSMUSG00000075214 |
| Gene Name |
olfactory receptor family 5 subfamily G member 25 |
| Synonyms |
MOR175-2, Olfr1002, GA_x6K02T2Q125-47127746-47126790 |
| MMRRC Submission |
045860-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.075)
|
| Stock # |
R7805 (G1)
|
| Quality Score |
225.009 |
|
Status
|
Validated
|
| Chromosome |
2 |
| Chromosomal Location |
85477707-85478663 bp(-) (GRCm39) |
| Type of Mutation |
nonsense |
| DNA Base Change (assembly) |
A to T
at 85477794 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Tyrosine to Stop codon
at position 290
(Y290*)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000150405
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000099920]
[ENSMUST00000215548]
|
| AlphaFold |
Q8VFK2 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000099920
AA Change: Y290*
|
| SMART Domains |
Protein: ENSMUSP00000097504
Gene: ENSMUSG00000075214
AA Change: Y290*
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
8.7e-50 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
2.5e-17 |
PFAM |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000215548
AA Change: Y290*
|
| Meta Mutation Damage Score |
0.9756 |
| Coding Region Coverage |
- 1x: 100.0%
- 3x: 100.0%
- 10x: 99.8%
- 20x: 99.4%
|
| Validation Efficiency |
98% (43/44) |
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 44 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca3 |
G |
A |
17: 24,624,128 (GRCm39) |
|
probably null |
Het |
| Aida |
A |
G |
1: 183,085,633 (GRCm39) |
K44R |
probably damaging |
Het |
| Ano5 |
G |
A |
7: 51,187,548 (GRCm39) |
V79M |
probably damaging |
Het |
| Armc9 |
G |
A |
1: 86,124,041 (GRCm39) |
G405D |
probably damaging |
Het |
| Baat |
T |
A |
4: 49,490,327 (GRCm39) |
R252S |
probably benign |
Het |
| C9orf72 |
G |
T |
4: 35,194,170 (GRCm39) |
H372Q |
|
Het |
| Camkk2 |
G |
T |
5: 122,880,275 (GRCm39) |
T447K |
possibly damaging |
Het |
| Car2 |
A |
G |
3: 14,965,130 (GRCm39) |
I255V |
probably benign |
Het |
| Cdhr1 |
A |
T |
14: 36,803,502 (GRCm39) |
S525T |
probably benign |
Het |
| Col24a1 |
T |
C |
3: 145,019,901 (GRCm39) |
Y91H |
probably benign |
Het |
| Cryba1 |
C |
A |
11: 77,613,434 (GRCm39) |
|
probably null |
Het |
| Csmd2 |
G |
A |
4: 128,313,366 (GRCm39) |
E1348K |
|
Het |
| Dcst1 |
A |
G |
3: 89,260,068 (GRCm39) |
L592P |
probably damaging |
Het |
| Ddx17 |
A |
G |
15: 79,421,723 (GRCm39) |
I334T |
probably damaging |
Het |
| Dspp |
A |
T |
5: 104,323,259 (GRCm39) |
N134I |
probably damaging |
Het |
| Eif4g3 |
T |
C |
4: 137,873,665 (GRCm39) |
V535A |
probably benign |
Het |
| Erc1 |
T |
C |
6: 119,690,732 (GRCm39) |
E847G |
possibly damaging |
Het |
| Fancc |
A |
G |
13: 63,508,056 (GRCm39) |
S160P |
possibly damaging |
Het |
| Fndc9 |
C |
T |
11: 46,129,138 (GRCm39) |
A219V |
probably damaging |
Het |
| Ifitm1 |
G |
A |
7: 140,548,282 (GRCm39) |
W38* |
probably null |
Het |
| Iqch |
A |
G |
9: 63,329,002 (GRCm39) |
|
probably null |
Het |
| Krt9 |
T |
C |
11: 100,083,522 (GRCm39) |
R170G |
possibly damaging |
Het |
| Lama4 |
T |
C |
10: 38,902,747 (GRCm39) |
|
probably null |
Het |
| Lrrc18 |
A |
G |
14: 32,730,973 (GRCm39) |
K171E |
probably damaging |
Het |
| Magi1 |
A |
G |
6: 93,659,927 (GRCm39) |
S1007P |
probably benign |
Het |
| Muc16 |
T |
A |
9: 18,549,789 (GRCm39) |
L5501F |
possibly damaging |
Het |
| Nrxn2 |
A |
G |
19: 6,581,736 (GRCm39) |
N1557S |
probably benign |
Het |
| Ovgp1 |
A |
G |
3: 105,894,110 (GRCm39) |
T628A |
unknown |
Het |
| Pld5 |
A |
T |
1: 175,872,480 (GRCm39) |
L219Q |
probably damaging |
Het |
| Rabggta |
G |
A |
14: 55,956,969 (GRCm39) |
T273I |
probably benign |
Het |
| Rnf208 |
A |
G |
2: 25,133,912 (GRCm39) |
D202G |
probably damaging |
Het |
| Sacs |
A |
G |
14: 61,441,040 (GRCm39) |
N1029D |
not run |
Het |
| Sema6b |
T |
A |
17: 56,438,555 (GRCm39) |
I114F |
probably damaging |
Het |
| Sgpp1 |
A |
G |
12: 75,769,451 (GRCm39) |
I239T |
probably damaging |
Het |
| Slc12a3 |
A |
G |
8: 95,071,515 (GRCm39) |
N638S |
probably damaging |
Het |
| Slc39a11 |
T |
C |
11: 113,482,781 (GRCm39) |
|
probably null |
Het |
| Smc3 |
T |
C |
19: 53,629,390 (GRCm39) |
S948P |
probably benign |
Het |
| Snx24 |
T |
A |
18: 53,522,623 (GRCm39) |
H159Q |
probably benign |
Het |
| Sycp2 |
G |
T |
2: 178,022,651 (GRCm39) |
N493K |
probably damaging |
Het |
| Tiam2 |
A |
G |
17: 3,559,685 (GRCm39) |
D1242G |
probably damaging |
Het |
| Triobp |
G |
T |
15: 78,858,204 (GRCm39) |
R1268S |
probably benign |
Het |
| Wdr12 |
T |
C |
1: 60,136,753 (GRCm39) |
|
probably benign |
Het |
| Xirp2 |
T |
A |
2: 67,340,325 (GRCm39) |
S855R |
probably benign |
Het |
| Zscan20 |
T |
A |
4: 128,479,599 (GRCm39) |
H964L |
probably damaging |
Het |
|
| Other mutations in Or5g25 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL02591:Or5g25
|
APN |
2 |
85,478,487 (GRCm39) |
missense |
probably damaging |
0.98 |
|
IGL02873:Or5g25
|
APN |
2 |
85,478,096 (GRCm39) |
missense |
possibly damaging |
0.50 |
|
PIT4362001:Or5g25
|
UTSW |
2 |
85,478,068 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1241:Or5g25
|
UTSW |
2 |
85,477,904 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1261:Or5g25
|
UTSW |
2 |
85,478,143 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1666:Or5g25
|
UTSW |
2 |
85,478,157 (GRCm39) |
nonsense |
probably null |
|
|
R1902:Or5g25
|
UTSW |
2 |
85,478,201 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
R1965:Or5g25
|
UTSW |
2 |
85,478,090 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
R2096:Or5g25
|
UTSW |
2 |
85,478,434 (GRCm39) |
missense |
probably benign |
0.20 |
|
R4239:Or5g25
|
UTSW |
2 |
85,478,647 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R4730:Or5g25
|
UTSW |
2 |
85,478,336 (GRCm39) |
missense |
probably benign |
0.39 |
|
R4948:Or5g25
|
UTSW |
2 |
85,477,916 (GRCm39) |
missense |
probably benign |
0.30 |
|
R5627:Or5g25
|
UTSW |
2 |
85,477,991 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5844:Or5g25
|
UTSW |
2 |
85,478,239 (GRCm39) |
missense |
probably benign |
0.36 |
|
R6809:Or5g25
|
UTSW |
2 |
85,478,317 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7399:Or5g25
|
UTSW |
2 |
85,477,768 (GRCm39) |
missense |
possibly damaging |
0.89 |
|
R7476:Or5g25
|
UTSW |
2 |
85,478,512 (GRCm39) |
missense |
not run |
|
|
R7960:Or5g25
|
UTSW |
2 |
85,478,417 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
R8015:Or5g25
|
UTSW |
2 |
85,478,136 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R8355:Or5g25
|
UTSW |
2 |
85,478,485 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8455:Or5g25
|
UTSW |
2 |
85,478,485 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8479:Or5g25
|
UTSW |
2 |
85,478,447 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8683:Or5g25
|
UTSW |
2 |
85,478,410 (GRCm39) |
missense |
probably benign |
0.35 |
|
R8699:Or5g25
|
UTSW |
2 |
85,478,330 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R8762:Or5g25
|
UTSW |
2 |
85,478,034 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8897:Or5g25
|
UTSW |
2 |
85,478,187 (GRCm39) |
missense |
possibly damaging |
0.92 |
|
R9280:Or5g25
|
UTSW |
2 |
85,478,504 (GRCm39) |
nonsense |
probably null |
|
|
R9674:Or5g25
|
UTSW |
2 |
85,478,593 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGGAAATGGCCTTCTGTAAACC -3'
(R):5'- AATTCTGCTGATGGGAGGC -3'
Sequencing Primer
(F):5'- AATGGCCTTCTGTAAACCCTATTTTC -3'
(R):5'- CGCAAAGCCTTCTCCACCTG -3'
|
| Posted On |
2019-11-26 |
Incidental Mutation