Mutagenetix > Incidental Mutation

Incidental Mutation 'R8205:Zfp109'

635866

Institutional Source

Beutler Lab

Gene Symbol

Zfp109

Ensembl Gene

ENSMUSG00000074283

Gene Name

zinc finger protein 109

Synonyms

MMRRC Submission

067628-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.076) question?

Stock #

R8205 (G1)

Quality Score

225.009

Status

Validated

Chromosome

Chromosomal Location

23926997-23936985 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to A at 23928635 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Phenylalanine at position 266 (S266F)

Ref Sequence

ENSEMBL: ENSMUSP00000145925 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000037448] [ENSMUST00000206362] [ENSMUST00000206960]

AlphaFold

A0A0U1RPC5

Predicted Effect

possibly damaging
Transcript: ENSMUST00000037448
AA Change: S258F

PolyPhen 2 Score 0.574 (Sensitivity: 0.88; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000045498
Gene: ENSMUSG00000074283
AA Change: S258F

Domain	Start	End	E-Value	Type
KRAB	8	74	8.77e-20	SMART
ZnF_C2H2	283	305	2.91e-2	SMART
ZnF_C2H2	311	333	4.47e-3	SMART
ZnF_C2H2	339	361	4.11e-2	SMART
ZnF_C2H2	367	387	5.54e1	SMART
ZnF_C2H2	393	415	1.98e-4	SMART
ZnF_C2H2	421	443	8.67e-1	SMART
ZnF_C2H2	449	471	4.87e-4	SMART
ZnF_C2H2	477	499	7.49e-5	SMART
ZnF_C2H2	505	527	1.47e-3	SMART
ZnF_C2H2	533	555	3.21e-4	SMART
ZnF_C2H2	561	583	8.47e-4	SMART
ZnF_C2H2	589	611	2.57e-3	SMART
ZnF_C2H2	617	639	4.4e-2	SMART

Predicted Effect

possibly damaging
Transcript: ENSMUST00000206362
AA Change: S258F

PolyPhen 2 Score 0.574 (Sensitivity: 0.88; Specificity: 0.91)

Predicted Effect

probably damaging
Transcript: ENSMUST00000206960
AA Change: S266F

PolyPhen 2 Score 0.992 (Sensitivity: 0.70; Specificity: 0.97)

Coding Region Coverage

1x: 100.0%
3x: 99.9%
10x: 99.5%
20x: 98.2%

Validation Efficiency

100% (52/52)

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam39	T	C	8: 41,278,080 (GRCm39)	V157A	probably benign	Het
Adamtsl1	A	G	4: 86,117,650 (GRCm39)	*204W	probably null	Het
Add2	A	G	6: 86,063,899 (GRCm39)	E66G	probably damaging	Het
Adgrd1	A	G	5: 129,192,175 (GRCm39)	T114A	possibly damaging	Het
Aldh7a1	A	T	18: 56,678,070 (GRCm39)	I247N	probably damaging	Het
Ankrd13d	A	T	19: 4,331,009 (GRCm39)	M166K	probably damaging	Het
Brd7	A	G	8: 89,070,243 (GRCm39)	F388L	probably damaging	Het
Cap2	G	A	13: 46,768,739 (GRCm39)	V182M	probably damaging	Het
Col22a1	A	T	15: 71,732,918 (GRCm39)	V1100E	unknown	Het
Cracdl	T	C	1: 37,664,047 (GRCm39)	D617G	probably benign	Het
Crisp2	T	C	17: 41,095,969 (GRCm39)	E63G	possibly damaging	Het
Dst	T	G	1: 34,253,685 (GRCm39)	W2304G	probably damaging	Het
Eif2a	A	C	3: 58,456,156 (GRCm39)	N385T	probably damaging	Het
Eif4ebp2	A	T	10: 61,270,704 (GRCm39)	H108Q	probably benign	Het
Fgd3	T	C	13: 49,449,823 (GRCm39)	D142G	probably benign	Het
Gbp8	T	A	5: 105,198,846 (GRCm39)	H23L	probably benign	Het
Glt1d1	A	G	5: 127,768,080 (GRCm39)	E229G	probably benign	Het
Gpatch8	T	C	11: 102,371,213 (GRCm39)	D775G	unknown	Het
Heatr1	T	C	13: 12,430,928 (GRCm39)	Y1008H	probably benign	Het
Heatr5a	T	A	12: 52,005,792 (GRCm39)	N61I	probably benign	Het
Hydin	A	T	8: 111,319,270 (GRCm39)	H4391L	possibly damaging	Het
Ifi206	T	C	1: 173,309,450 (GRCm39)	E182G		Het
Mbtps1	A	G	8: 120,247,077 (GRCm39)	S789P	probably damaging	Het
Mex3a	T	C	3: 88,444,159 (GRCm39)	S412P	possibly damaging	Het
Msantd5f1	G	A	4: 73,605,542 (GRCm39)	V318I	possibly damaging	Het
Mup2	T	A	4: 60,137,659 (GRCm39)	D128V	probably benign	Het
Ndufaf7	G	A	17: 79,254,461 (GRCm39)	C418Y	probably benign	Het
Nlrp4a	A	G	7: 26,150,219 (GRCm39)	S609G	probably benign	Het
Obscn	T	A	11: 58,898,697 (GRCm39)	Y6554F	unknown	Het
Odf2l	A	G	3: 144,856,495 (GRCm39)		probably benign	Het
Or14j2	A	T	17: 37,885,892 (GRCm39)	C141S	probably damaging	Het
Or1o11	T	C	17: 37,757,180 (GRCm39)	V245A	probably damaging	Het
Or4c104	A	T	2: 88,587,016 (GRCm39)	M1K	probably null	Het
Plod2	G	T	9: 92,424,371 (GRCm39)		probably benign	Het
Ptgfr	A	G	3: 151,541,418 (GRCm39)	V30A	probably benign	Het
Pxdn	T	G	12: 30,056,566 (GRCm39)	L1259R	probably damaging	Het
Rnf6	A	G	5: 146,147,714 (GRCm39)	S435P	probably damaging	Het
Sacm1l	G	A	9: 123,415,724 (GRCm39)		probably null	Het
Scgb2b26	T	C	7: 33,643,833 (GRCm39)	T36A	probably benign	Het
Slc1a7	A	G	4: 107,865,508 (GRCm39)	N332S	probably benign	Het
Slfn5	T	C	11: 82,851,544 (GRCm39)	F614L	probably benign	Het
Smad7	C	A	18: 75,527,119 (GRCm39)	Q322K	probably damaging	Het
Smap1	T	C	1: 23,888,507 (GRCm39)	T253A	probably benign	Het
Socs5	G	T	17: 87,441,138 (GRCm39)	R26L	probably benign	Het
Steap4	A	T	5: 8,026,795 (GRCm39)	I253F	possibly damaging	Het
Tacc1	G	A	8: 25,672,803 (GRCm39)	H142Y	probably benign	Het
Tent5c	A	G	3: 100,380,138 (GRCm39)	F206S	probably benign	Het
Tmem117	G	A	15: 94,992,679 (GRCm39)	M446I	probably benign	Het
Trav7-6	G	A	14: 53,954,550 (GRCm39)	D47N	probably benign	Het
Trim2	C	A	3: 84,100,646 (GRCm39)	A162S	probably damaging	Het
Ttc28	A	G	5: 111,373,596 (GRCm39)	I1011V	possibly damaging	Het
Vmn2r98	T	C	17: 19,301,425 (GRCm39)	V809A	probably damaging	Het
Wfikkn1	T	A	17: 26,097,071 (GRCm39)	T418S	probably benign	Het
Zbtb41	T	A	1: 139,356,919 (GRCm39)	D391E	possibly damaging	Het

Other mutations in Zfp109

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00646:Zfp109	APN	7	23,928,237 (GRCm39)	nonsense	probably null
IGL01082:Zfp109	APN	7	23,933,784 (GRCm39)	missense	probably damaging	1.00
IGL02129:Zfp109	APN	7	23,936,054 (GRCm39)	missense	possibly damaging	0.76
PIT4585001:Zfp109	UTSW	7	23,928,779 (GRCm39)	missense	probably benign	0.35
R0319:Zfp109	UTSW	7	23,933,895 (GRCm39)	missense	probably damaging	1.00
R1502:Zfp109	UTSW	7	23,927,588 (GRCm39)	missense	probably damaging	1.00
R1912:Zfp109	UTSW	7	23,927,676 (GRCm39)	missense	probably damaging	0.97
R1930:Zfp109	UTSW	7	23,928,161 (GRCm39)	missense	probably damaging	1.00
R1931:Zfp109	UTSW	7	23,928,161 (GRCm39)	missense	probably damaging	1.00
R1994:Zfp109	UTSW	7	23,928,743 (GRCm39)	missense	probably benign	0.04
R2105:Zfp109	UTSW	7	23,936,041 (GRCm39)	critical splice donor site	probably null
R2219:Zfp109	UTSW	7	23,927,886 (GRCm39)	missense	probably damaging	1.00
R2353:Zfp109	UTSW	7	23,928,806 (GRCm39)	missense	probably benign	0.06
R3754:Zfp109	UTSW	7	23,929,181 (GRCm39)	missense	probably benign	0.34
R4434:Zfp109	UTSW	7	23,928,771 (GRCm39)	missense	probably benign	0.02
R4884:Zfp109	UTSW	7	23,928,570 (GRCm39)	missense	probably benign	0.06
R5056:Zfp109	UTSW	7	23,928,162 (GRCm39)	missense	possibly damaging	0.75
R5220:Zfp109	UTSW	7	23,928,179 (GRCm39)	missense	probably benign	0.03
R5472:Zfp109	UTSW	7	23,928,046 (GRCm39)	nonsense	probably null
R5715:Zfp109	UTSW	7	23,928,995 (GRCm39)	missense	possibly damaging	0.92
R5801:Zfp109	UTSW	7	23,928,126 (GRCm39)	missense	probably damaging	0.99
R6092:Zfp109	UTSW	7	23,928,978 (GRCm39)	missense	possibly damaging	0.57
R6093:Zfp109	UTSW	7	23,928,558 (GRCm39)	missense	probably benign	0.03
R6334:Zfp109	UTSW	7	23,928,308 (GRCm39)	missense	probably damaging	0.96
R6458:Zfp109	UTSW	7	23,927,870 (GRCm39)	missense	probably benign	0.01
R6856:Zfp109	UTSW	7	23,928,823 (GRCm39)	missense	probably benign	0.03
R6879:Zfp109	UTSW	7	23,928,615 (GRCm39)	missense	probably benign	0.02
R7069:Zfp109	UTSW	7	23,928,785 (GRCm39)	missense	probably benign	0.01
R7151:Zfp109	UTSW	7	23,929,231 (GRCm39)	missense	probably benign	0.01
R7822:Zfp109	UTSW	7	23,928,570 (GRCm39)	missense	probably benign	0.06
R8492:Zfp109	UTSW	7	23,927,499 (GRCm39)	missense	possibly damaging	0.79
Z1088:Zfp109	UTSW	7	23,928,360 (GRCm39)	missense	probably benign	0.08
Z1177:Zfp109	UTSW	7	23,928,212 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- AGGCTGAAGTGAAACCCTTCC -3'
(R):5'- TGACAGAATGAGTTGTGTTTCCC -3'

Sequencing Primer
(F):5'- ACACACGTGGCATTTGTACG -3'
(R):5'- CAGAATGAGTTGTGTTTCCCATCAAG -3'

Posted On

2020-07-13