Mutagenetix > Incidental Mutation

Incidental Mutation 'R1292:Vdac3-ps1'

150823

Institutional Source

Beutler Lab

Gene Symbol

Vdac3-ps1

Ensembl Gene

ENSMUSG00000075053

Gene Name

voltage-dependent anion channel 3, pseudogene 1

Synonyms

ENSMUSG00000075053

MMRRC Submission

039358-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.347) question?

Stock #

R1292 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

18205326-18206178 bp(-) (GRCm39)

Type of Mutation

exon

DNA Base Change (assembly)

T to C at 18205880 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000099736

SMART Domains

Protein: ENSMUSP00000137236
Gene: ENSMUSG00000075053

Domain	Start	End	E-Value	Type
Pfam:Porin_3	3	276	4.8e-85	PFAM

Meta Mutation Damage Score

0.0869

Coding Region Coverage

1x: 99.1%
3x: 98.4%
10x: 97.0%
20x: 94.7%

Validation Efficiency

97% (31/32)

Allele List at MGI

Other mutations in this stock

Total: 29 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
4930550C14Rik	T	A	9: 53,336,919 (GRCm39)	D74E	probably benign	Het
Abcb1a	A	T	5: 8,763,343 (GRCm39)	T624S	probably benign	Het
Atp8b1	T	C	18: 64,704,092 (GRCm39)	Y342C	probably damaging	Het
Clcnka	A	G	4: 141,122,903 (GRCm39)		probably benign	Het
Cma2	C	T	14: 56,211,199 (GRCm39)	R164C	probably damaging	Het
Cnga1	T	C	5: 72,762,026 (GRCm39)	D496G	probably damaging	Het
Ctbp2	T	A	7: 132,616,918 (GRCm39)	R6W	probably damaging	Het
Cyp3a11	T	C	5: 145,802,804 (GRCm39)	T230A	probably benign	Het
Defb40	A	C	8: 19,028,080 (GRCm39)	I18S	probably benign	Het
Fcgbpl1	A	C	7: 27,842,219 (GRCm39)		probably benign	Het
Gm10036	T	G	18: 15,966,368 (GRCm39)	I173S	possibly damaging	Het
Herc2	A	T	7: 55,846,951 (GRCm39)	I3634L	probably benign	Het
Igfbp1	A	G	11: 7,150,863 (GRCm39)	N218S	probably damaging	Het
Jag1	C	G	2: 136,925,393 (GRCm39)	V1070L	possibly damaging	Het
Kmt2a	A	T	9: 44,725,991 (GRCm39)		probably benign	Het
Ly9	T	C	1: 171,416,671 (GRCm39)		probably null	Het
Mmut	C	A	17: 41,252,298 (GRCm39)	A280E	probably damaging	Het
Or5k16	C	T	16: 58,736,134 (GRCm39)	R290K	probably damaging	Het
Or6k6	A	G	1: 173,945,420 (GRCm39)	F54S	probably benign	Het
Pcdhb13	T	C	18: 37,576,885 (GRCm39)	V421A	probably benign	Het
Pik3ca	T	A	3: 32,508,569 (GRCm39)	L779Q	probably damaging	Het
Plxnd1	T	C	6: 115,939,644 (GRCm39)		probably benign	Het
Prss16	T	A	13: 22,193,691 (GRCm39)	K35*	probably null	Het
Rhbdl2	G	A	4: 123,723,435 (GRCm39)	A280T	possibly damaging	Het
Slc2a2	C	T	3: 28,771,637 (GRCm39)	T189I	probably damaging	Het
Srsf6	C	T	2: 162,776,403 (GRCm39)		probably benign	Het
Tacr1	A	G	6: 82,531,856 (GRCm39)	I251V	probably damaging	Het
Tln1	A	G	4: 43,534,578 (GRCm39)		probably null	Het
Zfp458	A	T	13: 67,404,754 (GRCm39)	C562S	probably damaging	Het

Other mutations in Vdac3-ps1

Allele	Source	Chr	Coord	Type	Predicted Effect
IGL01133:Vdac3-ps1	APN	13	18,206,034 (GRCm39)	exon	noncoding transcript
IGL01530:Vdac3-ps1	APN	13	18,206,091 (GRCm39)	exon	noncoding transcript
IGL02001:Vdac3-ps1	APN	13	18,205,973 (GRCm39)	exon	noncoding transcript
IGL02028:Vdac3-ps1	APN	13	18,205,469 (GRCm39)	exon	noncoding transcript
IGL02275:Vdac3-ps1	APN	13	18,205,379 (GRCm39)	exon	noncoding transcript
IGL02965:Vdac3-ps1	APN	13	18,205,431 (GRCm39)	exon	noncoding transcript
R4582:Vdac3-ps1	UTSW	13	18,206,177 (GRCm39)	exon	noncoding transcript
R5941:Vdac3-ps1	UTSW	13	18,205,787 (GRCm39)	exon	noncoding transcript

Predicted Primers

PCR Primer
(F):5'- TGAGCCTCCAAACTCAGTGCCATC -3'
(R):5'- AGGAGAGTGGCTGTGAGATTTACCC -3'

Sequencing Primer
(F):5'- GGCTGTGTCAAAACTCATCTG -3'
(R):5'- GGCTGTGAGATTTACCCCAAATG -3'

Posted On

2014-01-29