Mutagenetix > Incidental Mutation

Incidental Mutation 'R2280:Apoh'

243060

Institutional Source

Beutler Lab

Gene Symbol

Apoh

Ensembl Gene

ENSMUSG00000000049

Gene Name

apolipoprotein H

Synonyms

B2GPI, beta-2-glycoprotein 1, beta-2-GPI

MMRRC Submission

040279-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.339) question?

Stock #

R2280 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

108286123-108305222 bp(+) (GRCm39)

Type of Mutation

nonsense

DNA Base Change (assembly)

T to A at 108300006 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Stop codon at position 218 (Y218*)

Ref Sequence

ENSEMBL: ENSMUSP00000000049 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000000049] [ENSMUST00000152958]

AlphaFold

Q01339

Predicted Effect

probably null
Transcript: ENSMUST00000000049
AA Change: Y218*

SMART Domains

Protein: ENSMUSP00000000049
Gene: ENSMUSG00000000049
AA Change: Y218*

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
CCP	23	79	1.35e-7	SMART
CCP	84	137	2.53e-12	SMART
CCP	142	200	4.92e-10	SMART
CCP	205	260	1.98e-14	SMART
CCP	264	325	2.51e1	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000152958

SMART Domains

Protein: ENSMUSP00000114214
Gene: ENSMUSG00000000049

Domain	Start	End	E-Value	Type
signal peptide	1	19	N/A	INTRINSIC
CCP	23	79	1.35e-7	SMART
CCP	84	137	2.53e-12	SMART

Coding Region Coverage

1x: 99.1%
3x: 98.5%
10x: 97.1%
20x: 94.5%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Apolipoprotein H has been implicated in a variety of physiologic pathways including lipoprotein metabolism, coagulation, and the production of antiphospholipid autoantibodies. APOH may be a required cofactor for anionic phospholipid binding by the antiphospholipid autoantibodies found in sera of many patients with lupus and primary antiphospholipid syndrome, but it does not seem to be required for the reactivity of antiphospholipid autoantibodies associated with infections. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygous mutation of this gene results in reduced viability and reduced thrombin production. Only 8% homozygous null animals are born from heterozygous intercrosses. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 62 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alms1	A	G	6: 85,654,955 (GRCm39)	N2698S	probably damaging	Het
Ankrd37	T	C	8: 46,452,413 (GRCm39)	T19A	probably benign	Het
Anks1b	A	C	10: 90,802,164 (GRCm39)	K353N	probably damaging	Het
Ano3	T	A	2: 110,513,104 (GRCm39)	E630D	probably benign	Het
Ap3b1	A	G	13: 94,664,724 (GRCm39)	M888V	unknown	Het
Arhgef19	G	A	4: 140,973,827 (GRCm39)	G105S	probably benign	Het
Brd7	A	G	8: 89,069,385 (GRCm39)	S437P	probably benign	Het
Cacna2d4	A	T	6: 119,327,002 (GRCm39)	Q1089L	possibly damaging	Het
Ccdc168	T	A	1: 44,095,620 (GRCm39)	H1826L	possibly damaging	Het
Ccser1	A	T	6: 61,547,799 (GRCm39)	M49L	probably damaging	Het
Cep170	A	T	1: 176,602,071 (GRCm39)	V345E	probably benign	Het
Chaf1b	T	G	16: 93,688,459 (GRCm39)	Y185D	probably damaging	Het
Clasp1	C	T	1: 118,492,913 (GRCm39)	P1153S	probably benign	Het
Clvs2	A	T	10: 33,404,496 (GRCm39)	I240N	probably damaging	Het
Cox8c	A	T	12: 102,865,713 (GRCm39)	H30L	possibly damaging	Het
Crtac1	G	A	19: 42,272,006 (GRCm39)	L646F	unknown	Het
Cyp46a1	T	C	12: 108,321,730 (GRCm39)	S319P	probably damaging	Het
Dcdc5	G	A	2: 106,202,867 (GRCm39)		noncoding transcript	Het
Ddx4	T	C	13: 112,757,190 (GRCm39)	I377V	probably benign	Het
Dis3l	T	A	9: 64,225,076 (GRCm39)	N407I	possibly damaging	Het
Dysf	A	C	6: 84,041,476 (GRCm39)	T161P	probably damaging	Het
Ecsit	C	T	9: 21,987,836 (GRCm39)	V68I	possibly damaging	Het
Ei24	A	G	9: 36,693,635 (GRCm39)		probably null	Het
Fbxl19	A	T	7: 127,347,540 (GRCm39)	D32V	possibly damaging	Het
Fgd5	G	A	6: 91,965,926 (GRCm39)	V562M	possibly damaging	Het
Flnc	G	A	6: 29,438,665 (GRCm39)	W186*	probably null	Het
Frem2	A	G	3: 53,479,844 (GRCm39)	C1950R	probably damaging	Het
Fryl	T	C	5: 73,198,707 (GRCm39)	D2640G	possibly damaging	Het
Ganab	T	C	19: 8,886,832 (GRCm39)	V306A	probably damaging	Het
Gbx2	A	T	1: 89,858,359 (GRCm39)	V40D	probably damaging	Het
Gcc2	C	A	10: 58,105,502 (GRCm39)	T210K	probably benign	Het
Gcn1	T	A	5: 115,750,789 (GRCm39)	M1991K	probably damaging	Het
Gpr18	T	A	14: 122,150,017 (GRCm39)	T3S	probably benign	Het
Herc2	A	C	7: 55,787,019 (GRCm39)	K1621N	possibly damaging	Het
Hspg2	A	G	4: 137,249,354 (GRCm39)	E1300G	probably damaging	Het
Krtap19-5	C	T	16: 88,693,231 (GRCm39)	C27Y	unknown	Het
Lrrc3b	A	T	14: 15,358,076 (GRCm38)	L177M	probably damaging	Het
Mthfd1	T	C	12: 76,327,266 (GRCm39)	I118T	probably benign	Het
Ncoa4-ps	A	G	12: 119,226,573 (GRCm39)		noncoding transcript	Het
Nphp4	A	G	4: 152,641,500 (GRCm39)	K1094E	possibly damaging	Het
Npy1r	C	T	8: 67,156,711 (GRCm39)	L44F	possibly damaging	Het
Or10aa1	C	A	1: 173,870,087 (GRCm39)	S190R	probably benign	Het
Pcx	C	A	19: 4,654,571 (GRCm39)	R328S	probably damaging	Het
Pde6a	T	C	18: 61,395,505 (GRCm39)	Y583H	probably damaging	Het
Pip5k1b	T	A	19: 24,356,311 (GRCm39)	Y209F	probably damaging	Het
Plch2	A	T	4: 155,068,766 (GRCm39)	S1182T	probably damaging	Het
Pum1	A	T	4: 130,493,322 (GRCm39)	I696F	probably damaging	Het
Pxdn	T	C	12: 30,034,905 (GRCm39)	V254A	probably damaging	Het
Rcsd1	C	T	1: 165,486,998 (GRCm39)	A72T	probably benign	Het
Rsph4a	A	T	10: 33,787,595 (GRCm39)	I584L	probably benign	Het
Scamp5	A	G	9: 57,352,722 (GRCm39)	V149A	probably benign	Het
Sike1	A	G	3: 102,904,694 (GRCm39)	H134R	possibly damaging	Het
Slc12a9	A	G	5: 137,330,474 (GRCm39)	L77P	probably damaging	Het
Spmap2l	T	C	5: 77,207,214 (GRCm39)	I324T	probably damaging	Het
Taar7f	G	A	10: 23,925,417 (GRCm39)	A4T	probably benign	Het
Tmem216	T	A	19: 10,529,237 (GRCm39)	T104S	probably damaging	Het
Tpsg1	C	T	17: 25,593,016 (GRCm39)	R94C	probably damaging	Het
Utp20	A	T	10: 88,661,365 (GRCm39)		probably null	Het
Wdr35	A	G	12: 9,028,628 (GRCm39)	Q82R	probably benign	Het
Zfp12	A	G	5: 143,231,248 (GRCm39)	Y525C	probably damaging	Het
Zfp532	T	C	18: 65,757,783 (GRCm39)	V572A	probably damaging	Het
Zfyve26	T	A	12: 79,321,814 (GRCm39)	Q935L	probably damaging	Het

Other mutations in Apoh

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00090:Apoh	APN	11	108,286,660 (GRCm39)	missense	probably benign	0.45
IGL01327:Apoh	APN	11	108,288,187 (GRCm39)	missense	probably damaging	1.00
IGL01353:Apoh	APN	11	108,288,211 (GRCm39)	missense	probably damaging	1.00
IGL01464:Apoh	APN	11	108,286,716 (GRCm39)	missense	probably damaging	1.00
IGL02065:Apoh	APN	11	108,305,131 (GRCm39)	utr 3 prime	probably benign
IGL02646:Apoh	APN	11	108,302,968 (GRCm39)	missense	probably benign	0.15
R0125:Apoh	UTSW	11	108,302,899 (GRCm39)	missense	probably damaging	1.00
R0359:Apoh	UTSW	11	108,288,199 (GRCm39)	missense	probably damaging	1.00
R1969:Apoh	UTSW	11	108,298,288 (GRCm39)	missense	probably benign	0.00
R2568:Apoh	UTSW	11	108,295,697 (GRCm39)	missense	probably benign	0.00
R4369:Apoh	UTSW	11	108,288,205 (GRCm39)	missense	probably damaging	1.00
R4789:Apoh	UTSW	11	108,300,064 (GRCm39)	missense	probably damaging	1.00
R4824:Apoh	UTSW	11	108,305,087 (GRCm39)	missense	probably benign	0.37
R4937:Apoh	UTSW	11	108,298,204 (GRCm39)	missense	probably benign	0.19
R5634:Apoh	UTSW	11	108,302,875 (GRCm39)	missense	probably damaging	1.00
R5900:Apoh	UTSW	11	108,302,843 (GRCm39)	missense	probably damaging	0.99
R5951:Apoh	UTSW	11	108,286,729 (GRCm39)	missense	probably damaging	1.00
R6054:Apoh	UTSW	11	108,286,801 (GRCm39)	missense	probably damaging	1.00
R6126:Apoh	UTSW	11	108,288,199 (GRCm39)	missense	probably damaging	1.00
R7343:Apoh	UTSW	11	108,286,674 (GRCm39)	missense	probably benign	0.14
R7471:Apoh	UTSW	11	108,298,131 (GRCm39)	missense	probably damaging	1.00
R8557:Apoh	UTSW	11	108,300,062 (GRCm39)	missense	probably damaging	0.99
R9310:Apoh	UTSW	11	108,298,307 (GRCm39)	critical splice donor site	probably null
R9671:Apoh	UTSW	11	108,286,792 (GRCm39)	nonsense	probably null
X0065:Apoh	UTSW	11	108,286,176 (GRCm39)	missense	probably damaging	1.00
Z1176:Apoh	UTSW	11	108,234,285 (GRCm39)	start gained	probably benign

Predicted Primers

PCR Primer
(F):5'- AGGGACCTAGAAACTGCATTTC -3'
(R):5'- AAATGGCCAACGAGCGTGATC -3'

Sequencing Primer
(F):5'- ACTGCATTTCACTCACAGGATG -3'
(R):5'- TCACTGGGCGAATTCAGTAC -3'

Posted On

2014-10-16