Incidental Mutation 'R3925:Crct1'
ID 308235
Institutional Source Beutler Lab
Gene Symbol Crct1
Ensembl Gene ENSMUSG00000027913
Gene Name cysteine-rich C-terminal 1
Synonyms 2300002G24Rik, Nice-1
MMRRC Submission 040916-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.065) question?
Stock # R3925 (G1)
Quality Score 194
Status Validated
Chromosome 3
Chromosomal Location 92921512-92922993 bp(-) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) C to A at 92922014 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000141488 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029520] [ENSMUST00000029521] [ENSMUST00000107301] [ENSMUST00000193944]
AlphaFold Q6PAI5
Predicted Effect probably benign
Transcript: ENSMUST00000029520
SMART Domains Protein: ENSMUSP00000029520
Gene: ENSMUSG00000027912

DomainStartEndE-ValueType
Pfam:LCE 9 96 5.4e-18 PFAM
Predicted Effect unknown
Transcript: ENSMUST00000029521
AA Change: R41M
SMART Domains Protein: ENSMUSP00000029521
Gene: ENSMUSG00000027913
AA Change: R41M

DomainStartEndE-ValueType
low complexity region 12 102 N/A INTRINSIC
Predicted Effect unknown
Transcript: ENSMUST00000107301
AA Change: R41M
SMART Domains Protein: ENSMUSP00000102922
Gene: ENSMUSG00000027913
AA Change: R41M

DomainStartEndE-ValueType
Pfam:NICE-1 5 100 5.4e-36 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000193944
Meta Mutation Damage Score 0.1444 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.7%
  • 10x: 97.5%
  • 20x: 95.8%
Validation Efficiency 97% (30/31)
Allele List at MGI
Other mutations in this stock
Total: 31 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adgrv1 G A 13: 81,726,891 (GRCm39) T487I possibly damaging Het
Amn T C 12: 111,242,114 (GRCm39) V367A possibly damaging Het
Becn2 T C 1: 175,748,852 (GRCm39) V306A probably benign Het
C230029F24Rik AGAAAG A 1: 49,350,088 (GRCm39) noncoding transcript Het
Cdkl1 G T 12: 69,803,373 (GRCm39) R168S probably damaging Het
Cfap43 T C 19: 47,785,555 (GRCm39) K445R probably benign Het
Eif4e G A 3: 138,261,198 (GRCm39) G164D probably damaging Het
Eno1 T C 4: 150,324,025 (GRCm39) probably null Het
Hmcn2 G A 2: 31,343,169 (GRCm39) R4565Q probably benign Het
Itgal A T 7: 126,923,709 (GRCm39) probably benign Het
Klhl1 A T 14: 96,584,316 (GRCm39) C305S possibly damaging Het
Ms4a2 A G 19: 11,596,312 (GRCm39) M139T probably benign Het
Nr2e3 C T 9: 59,855,716 (GRCm39) R213H probably damaging Het
Onecut2 A G 18: 64,474,591 (GRCm39) K381E probably damaging Het
Or2t43 T A 11: 58,457,652 (GRCm39) H173L probably benign Het
Or52n1 T A 7: 104,383,396 (GRCm39) E58D probably benign Het
Or5t17 A G 2: 86,832,718 (GRCm39) Y135C possibly damaging Het
Pabpc1l T A 2: 163,869,596 (GRCm39) probably benign Het
Prim2 A G 1: 33,572,380 (GRCm39) L253P probably damaging Het
Pycr1 T C 11: 120,532,961 (GRCm39) T100A probably benign Het
Qrfpr T C 3: 36,276,072 (GRCm39) N106S possibly damaging Het
Rsf1 GCG GCGACGGCGACG 7: 97,229,114 (GRCm39) probably benign Het
Selenoi T A 5: 30,461,086 (GRCm39) D107E probably damaging Het
Synrg C T 11: 83,931,725 (GRCm39) P1321S probably benign Het
Trgv7 A G 13: 19,362,644 (GRCm39) Y111C probably damaging Het
Trp53rkb A G 2: 166,637,392 (GRCm39) Y116C probably damaging Het
Usp34 T A 11: 23,293,640 (GRCm39) F245I probably benign Het
Utrn C T 10: 12,573,786 (GRCm39) V1095I probably benign Het
Xpnpep1 T C 19: 52,980,128 (GRCm39) H632R probably damaging Het
Zfp735 T C 11: 73,601,950 (GRCm39) I298T probably benign Het
Zfp953 T A 13: 67,496,002 (GRCm39) Y13F probably damaging Het
Other mutations in Crct1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R3706:Crct1 UTSW 3 92,922,014 (GRCm39) unclassified probably benign
R3745:Crct1 UTSW 3 92,922,014 (GRCm39) unclassified probably benign
R3805:Crct1 UTSW 3 92,922,014 (GRCm39) unclassified probably benign
R3926:Crct1 UTSW 3 92,922,014 (GRCm39) unclassified probably benign
R4757:Crct1 UTSW 3 92,922,093 (GRCm39) nonsense probably null
R4921:Crct1 UTSW 3 92,922,132 (GRCm39) unclassified probably benign
Predicted Primers PCR Primer
(F):5'- AGCCTGAACTCTGATTGTTGC -3'
(R):5'- GCCAGACAGACTTTTCTCTAAGG -3'

Sequencing Primer
(F):5'- AACTCTGATTGTTGCAGGAGC -3'
(R):5'- AAGTTCTGTGTTCCACTATAGGGAAG -3'
Posted On 2015-04-17